CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 367

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13367T367TT5691TsynacAacG12810127550.99570617335-17337
ORF1ab/nsp13367T367TT5691TsynacAacC12810430.0033567517335-17337
ORF1ab/nsp13367T367TT5691TsynacAacT12810120.00093676817335-17337
ORF1ab/nsp13367T367IT5691InonsynaCaaTa46484648117335-17337
ORF1ab/nsp13367T367AT5691AnonsynAcaGca155155117335-17337
ORF1ab/nsp13367T367PT5691PnonsynAcaCca2121117335-17337
ORF1ab/nsp13367T367RT5691RnonsynaCaaGa1616117335-17337
ORF1ab/nsp13367T367delT5691deldelACA---33117335-17337
ORF1ab/nsp13367T367ST5691SnonsynAcaTca22117335-17337
ORF1ab/nsp13367T367KT5691KnonsynaCaaAa22117335-17337
ORF1ab/nsp13367T367MT5691MnonsynaCAaTG11117335-17337

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13367T367TacAacG1275512810All0.00244
ORF1ab/nsp13367T367TacAacC4312810All0.000008
ORF1ab/nsp13367T367TacAacT1212810All0.000002
ORF1ab/nsp13367T367TacAacG1075810767B.1.1.70.009631
ORF1ab/nsp13367T367TacAacT610767B.1.1.70.000005
ORF1ab/nsp13367T367TacAacC310767B.1.1.70.000003
ORF1ab/nsp13367T367IaCaaTa46484648All0.000889
ORF1ab/nsp13367T367IaCaaTa27962796AY.20.995726
ORF1ab/nsp13367T367TacAacG948948D.20.071139
ORF1ab/nsp13367T367TacAacG888888Q.70.986667
ORF1ab/nsp13367T367IaCaaTa531531AY.440.003232
ORF1ab/nsp13367T367AAcaGca155155All0.00003
ORF1ab/nsp13367T367IaCaaTa129129AY.790.156174
ORF1ab/nsp13367T367IaCaaTa129129B.1.617.20.000486
ORF1ab/nsp13367T367IaCaaTa116116AY.40.000181
ORF1ab/nsp13367T367IaCaaTa9292B.1.20.00081
ORF1ab/nsp13367T367IaCaaTa8787B.1.1.70.000078
ORF1ab/nsp13367T367AAcaGca8585B.1.1.70.000076
ORF1ab/nsp13367T367IaCaaTa6060B.1.5260.00141
ORF1ab/nsp13367T367IaCaaTa5555AY.46.40.009048
ORF1ab/nsp13367T367IaCaaTa4141AY.1030.000255
ORF1ab/nsp13367T367IaCaaTa4141B.10.000376
ORF1ab/nsp13367T367TacAacG3636AY.440.000219
ORF1ab/nsp13367T367TacAacC2530B.1.617.20.000094
ORF1ab/nsp13367T367TacAacG430B.1.617.20.000015
ORF1ab/nsp13367T367TacAacT130B.1.617.20.000004
ORF1ab/nsp13367T367IaCaaTa2828AY.250.000168
ORF1ab/nsp13367T367IaCaaTa2727AY.430.00012
ORF1ab/nsp13367T367IaCaaTa2727AY.710.012827
ORF1ab/nsp13367T367TacAacG2324B.1.20.000203
ORF1ab/nsp13367T367TacAacC124B.1.20.000009
ORF1ab/nsp13367T367IaCaaTa2323B.1.1.5190.000913
ORF1ab/nsp13367T367PAcaCca2121All0.000004
ORF1ab/nsp13367T367IaCaaTa2121AY.620.00915
ORF1ab/nsp13367T367IaCaaTa2020AY.390.000494
ORF1ab/nsp13367T367IaCaaTa1919AY.260.000538
ORF1ab/nsp13367T367IaCaaTa1919AY.750.001064
ORF1ab/nsp13367T367IaCaaTa1717AY.1000.000782
ORF1ab/nsp13367T367RaCaaGa1616All0.000003
ORF1ab/nsp13367T367IaCaaTa1515AY.30.000149
ORF1ab/nsp13367T367IaCaaTa1515B.1.1770.000198
ORF1ab/nsp13367T367AAcaGca1515B.1.5170.006405
ORF1ab/nsp13367T367IaCaaTa1414AY.120.20.017995
ORF1ab/nsp13367T367IaCaaTa1414AY.290.000221
ORF1ab/nsp13367T367IaCaaTa1414AY.370.004425
ORF1ab/nsp13367T367AAcaGca1414AY.40.000022
ORF1ab/nsp13367T367IaCaaTa1313AY.380.00649
ORF1ab/nsp13367T367IaCaaTa1313AY.420.000523
ORF1ab/nsp13367T367TacAacG1313B.1.10.000236
ORF1ab/nsp13367T367IaCaaTa1313B.1.36.10.014823
ORF1ab/nsp13367T367IaCaaTa1212AY.1020.000318
ORF1ab/nsp13367T367IaCaaTa1010AY.116.10.003114
ORF1ab/nsp13367T367AAcaGca1010B.1.5960.000871
ORF1ab/nsp13367T367TacAacG1010Q.10.001263
ORF1ab/nsp13367T367TacAacG99AY.40.000014
ORF1ab/nsp13367T367IaCaaTa99B.1.3510.000268
ORF1ab/nsp13367T367IaCaaTa99P.10.000142
ORF1ab/nsp13367T367TacAacC78AY.1020.000186
ORF1ab/nsp13367T367TacAacG18AY.1020.000027
ORF1ab/nsp13367T367RaCaaGa88B.1.5250.000905
ORF1ab/nsp13367T367PAcaCca88B.1.617.10.001032
ORF1ab/nsp13367T367TacAacG77AY.430.000031
ORF1ab/nsp13367T367IaCaaTa77AY.520.0057
ORF1ab/nsp13367T367IaCaaTa77AY.650.003731
ORF1ab/nsp13367T367IaCaaTa77AY.75.10.001262
ORF1ab/nsp13367T367RaCaaGa77B.1.1.70.000006
ORF1ab/nsp13367T367IaCaaTa77B.1.4290.000165
ORF1ab/nsp13367T367IaCaaTa66AY.10.002374
ORF1ab/nsp13367T367TacAacG66AY.1030.000037
ORF1ab/nsp13367T367IaCaaTa66AY.1180.000376
ORF1ab/nsp13367T367IaCaaTa66AY.470.000187
ORF1ab/nsp13367T367IaCaaTa66AY.99.20.000553
ORF1ab/nsp13367T367TacAacG46B.10.000037
ORF1ab/nsp13367T367TacAacC26B.10.000018
ORF1ab/nsp13367T367IaCaaTa66B.1.6210.000531
ORF1ab/nsp13367T367TacAacG55B.1.3510.000149
ORF1ab/nsp13367T367IaCaaTa44AY.100.00212
ORF1ab/nsp13367T367TacAacG34AY.250.000018
ORF1ab/nsp13367T367TacAacT14AY.250.000006
ORF1ab/nsp13367T367IaCaaTa44AY.4.20.000087
ORF1ab/nsp13367T367IaCaaTa44AY.9.20.000147
ORF1ab/nsp13367T367AAcaGca44B.10.000037
ORF1ab/nsp13367T367IaCaaTa44B.1.5960.000349
ORF1ab/nsp13367T367delACA---33All0.000001
ORF1ab/nsp13367T367PAcaCca33AY.1030.000019
ORF1ab/nsp13367T367IaCaaTa33AY.1060.001005
ORF1ab/nsp13367T367IaCaaTa33AY.200.000117
ORF1ab/nsp13367T367IaCaaTa33AY.230.000209
ORF1ab/nsp13367T367TacAacG33AY.30.00003
ORF1ab/nsp13367T367IaCaaTa33AY.3.10.000256
ORF1ab/nsp13367T367IaCaaTa33AY.340.000291
ORF1ab/nsp13367T367IaCaaTa33AY.50.000062
ORF1ab/nsp13367T367IaCaaTa33AY.740.000347
ORF1ab/nsp13367T367IaCaaTa33AY.960.006224
ORF1ab/nsp13367T367IaCaaTa33AY.98.10.000145
ORF1ab/nsp13367T367IaCaaTa33B.1.10.000054
ORF1ab/nsp13367T367AAcaGca33B.1.10.000054
ORF1ab/nsp13367T367IaCaaTa33B.1.1.2410.006211
ORF1ab/nsp13367T367TacAacG33B.1.1.570.034483
ORF1ab/nsp13367T367PAcaCca33B.1.1770.00004
ORF1ab/nsp13367T367IaCaaTa33B.1.1790.011278
ORF1ab/nsp13367T367IaCaaTa33B.1.6280.001057
ORF1ab/nsp13367T367IaCaaTa33C.370.000348
ORF1ab/nsp13367T367IaCaaTa33P.1.160.001122
ORF1ab/nsp13367T367SAcaTca22All0
ORF1ab/nsp13367T367KaCaaAa22All0
ORF1ab/nsp13367T367AAcaGca22AY.1030.000012
ORF1ab/nsp13367T367TacAacG22AY.1160.000574
ORF1ab/nsp13367T367IaCaaTa22AY.1170.000169
ORF1ab/nsp13367T367TacAacG22AY.1190.000071
ORF1ab/nsp13367T367IaCaaTa22AY.1190.000071
ORF1ab/nsp13367T367IaCaaTa22AY.190.002281
ORF1ab/nsp13367T367AAcaGca22AY.290.000032
ORF1ab/nsp13367T367PAcaCca22AY.330.000134
ORF1ab/nsp13367T367TacAacC22AY.39.10.000079
ORF1ab/nsp13367T367IaCaaTa22AY.4.30.001684
ORF1ab/nsp13367T367TacAacG22AY.4.50.000215
ORF1ab/nsp13367T367IaCaaTa22AY.410.000588
ORF1ab/nsp13367T367IaCaaTa22AY.450.000243
ORF1ab/nsp13367T367IaCaaTa22AY.510.001818
ORF1ab/nsp13367T367IaCaaTa22AY.590.001059
ORF1ab/nsp13367T367IaCaaTa22AY.850.000854
ORF1ab/nsp13367T367IaCaaTa22AY.860.00166
ORF1ab/nsp13367T367IaCaaTa22AY.90.000135
ORF1ab/nsp13367T367IaCaaTa22AY.950.001522
ORF1ab/nsp13367T367IaCaaTa22B0.000256
ORF1ab/nsp13367T367IaCaaTa22B.1.1.2140.000111
ORF1ab/nsp13367T367IaCaaTa22B.1.1.2840.000215
ORF1ab/nsp13367T367IaCaaTa22B.1.1.4480.004065
ORF1ab/nsp13367T367IaCaaTa22B.1.1.4640.002946
ORF1ab/nsp13367T367TacAacG22B.1.1600.000062
ORF1ab/nsp13367T367TacAacG22B.1.1770.000026
ORF1ab/nsp13367T367IaCaaTa22B.1.177.210.000153
ORF1ab/nsp13367T367IaCaaTa22B.1.177.40.000422
ORF1ab/nsp13367T367AAcaGca22B.1.177.750.002081
ORF1ab/nsp13367T367IaCaaTa22B.1.2400.000431
ORF1ab/nsp13367T367IaCaaTa22B.1.2430.000139
ORF1ab/nsp13367T367IaCaaTa22B.1.360.000292
ORF1ab/nsp13367T367IaCaaTa22B.1.5250.000226
ORF1ab/nsp13367T367TacAacG12B.1.617.10.000129
ORF1ab/nsp13367T367TacAacC12B.1.617.10.000129
ORF1ab/nsp13367T367TacAacT11A.20.000662
ORF1ab/nsp13367T367IaCaaTa11AE.50.018519
ORF1ab/nsp13367T367MaCAaTG11All0
ORF1ab/nsp13367T367delACA---11AU.30.00211
ORF1ab/nsp13367T367TacAacG11AY.1000.000046
ORF1ab/nsp13367T367IaCaaTa11AY.1070.000466
ORF1ab/nsp13367T367TacAacT11AY.1100.000113
ORF1ab/nsp13367T367IaCaaTa11AY.1100.000113
ORF1ab/nsp13367T367IaCaaTa11AY.1140.000231
ORF1ab/nsp13367T367TacAacG11AY.1170.000085
ORF1ab/nsp13367T367AAcaGca11AY.1200.000037
ORF1ab/nsp13367T367IaCaaTa11AY.1200.000037
ORF1ab/nsp13367T367TacAacG11AY.120.10.000321
ORF1ab/nsp13367T367IaCaaTa11AY.1210.000135
ORF1ab/nsp13367T367TacAacG11AY.130.000161
ORF1ab/nsp13367T367TacAacG11AY.140.000088
ORF1ab/nsp13367T367IaCaaTa11AY.160.00038
ORF1ab/nsp13367T367IaCaaTa11AY.16.10.00047
ORF1ab/nsp13367T367TacAacG11AY.200.000039
ORF1ab/nsp13367T367PAcaCca11AY.260.000028
ORF1ab/nsp13367T367AAcaGca11AY.260.000028
ORF1ab/nsp13367T367IaCaaTa11AY.270.000065
ORF1ab/nsp13367T367IaCaaTa11AY.29.10.000221
ORF1ab/nsp13367T367AAcaGca11AY.3.10.000085
ORF1ab/nsp13367T367AAcaGca11AY.330.000067
ORF1ab/nsp13367T367IaCaaTa11AY.330.000067
ORF1ab/nsp13367T367TacAacG11AY.350.000233
ORF1ab/nsp13367T367AAcaGca11AY.390.000025
ORF1ab/nsp13367T367IaCaaTa11AY.39.10.00004
ORF1ab/nsp13367T367PAcaCca11AY.4.40.000409
ORF1ab/nsp13367T367IaCaaTa11AY.4.50.000107
ORF1ab/nsp13367T367AAcaGca11AY.420.00004
ORF1ab/nsp13367T367AAcaGca11AY.440.000006
ORF1ab/nsp13367T367TacAacC11AY.46.40.000165
ORF1ab/nsp13367T367PAcaCca11AY.50.000021
ORF1ab/nsp13367T367IaCaaTa11AY.5.40.000277
ORF1ab/nsp13367T367IaCaaTa11AY.500.000799
ORF1ab/nsp13367T367TacAacC11AY.530.000288
ORF1ab/nsp13367T367IaCaaTa11AY.560.001605
ORF1ab/nsp13367T367IaCaaTa11AY.60.000041
ORF1ab/nsp13367T367IaCaaTa11AY.600.000938
ORF1ab/nsp13367T367IaCaaTa11AY.610.000105
ORF1ab/nsp13367T367IaCaaTa11AY.640.000595
ORF1ab/nsp13367T367IaCaaTa11AY.670.000464
ORF1ab/nsp13367T367IaCaaTa11AY.680.000274
ORF1ab/nsp13367T367TacAacG11AY.690.000187
ORF1ab/nsp13367T367IaCaaTa11AY.730.000665
ORF1ab/nsp13367T367AAcaGca11AY.750.000056
ORF1ab/nsp13367T367AAcaGca11AY.820.001357
ORF1ab/nsp13367T367TacAacG11AY.9.20.000037
ORF1ab/nsp13367T367IaCaaTa11AY.930.000273
ORF1ab/nsp13367T367IaCaaTa11AY.980.000079
ORF1ab/nsp13367T367TacAacG11B.1.1.1610.003534
ORF1ab/nsp13367T367AAcaGca11B.1.1.1980.001468
ORF1ab/nsp13367T367IaCaaTa11B.1.1.2200.001859
ORF1ab/nsp13367T367TacAacG11B.1.1.250.000569
ORF1ab/nsp13367T367IaCaaTa11B.1.1.2630.001558
ORF1ab/nsp13367T367TacAacG11B.1.1.3180.000302
ORF1ab/nsp13367T367IaCaaTa11B.1.1.3490.010309
ORF1ab/nsp13367T367IaCaaTa11B.1.1.4020.011111
ORF1ab/nsp13367T367IaCaaTa11B.1.1.580.005376
ORF1ab/nsp13367T367MaCAaTG11B.1.1.70.000001
ORF1ab/nsp13367T367PAcaCca11B.1.1.70.000001
ORF1ab/nsp13367T367SAcaTca11B.1.1.70.000001
ORF1ab/nsp13367T367KaCaaAa11B.1.1.70.000001
ORF1ab/nsp13367T367IaCaaTa11B.1.1600.000031
ORF1ab/nsp13367T367AAcaGca11B.1.1770.000013
ORF1ab/nsp13367T367TacAacT11B.1.177.310.011494
ORF1ab/nsp13367T367IaCaaTa11B.1.177.310.011494
ORF1ab/nsp13367T367IaCaaTa11B.1.177.350.000691
ORF1ab/nsp13367T367TacAacG11B.1.177.730.000566
ORF1ab/nsp13367T367IaCaaTa11B.1.177.820.000477
ORF1ab/nsp13367T367TacAacG11B.1.214.20.0006
ORF1ab/nsp13367T367TacAacG11B.1.2210.000071
ORF1ab/nsp13367T367IaCaaTa11B.1.2290.009709
ORF1ab/nsp13367T367IaCaaTa11B.1.258.110.000396
ORF1ab/nsp13367T367IaCaaTa11B.1.258.170.000104
ORF1ab/nsp13367T367TacAacG11B.1.258.170.000104
ORF1ab/nsp13367T367IaCaaTa11B.1.2890.00266
ORF1ab/nsp13367T367IaCaaTa11B.1.3010.005917
ORF1ab/nsp13367T367AAcaGca11B.1.360.000146
ORF1ab/nsp13367T367TacAacG11B.1.360.000146
ORF1ab/nsp13367T367IaCaaTa11B.1.36.310.001751
ORF1ab/nsp13367T367IaCaaTa11B.1.36.360.000602
ORF1ab/nsp13367T367IaCaaTa11B.1.3690.000285
ORF1ab/nsp13367T367TacAacT11B.1.4270.00005
ORF1ab/nsp13367T367TacAacG11B.1.4290.000024
ORF1ab/nsp13367T367AAcaGca11B.1.4290.000024
ORF1ab/nsp13367T367IaCaaTa11B.1.438.10.000107
ORF1ab/nsp13367T367AAcaGca11B.1.5030.002488
ORF1ab/nsp13367T367AAcaGca11B.1.5260.000024
ORF1ab/nsp13367T367IaCaaTa11B.1.5640.000426
ORF1ab/nsp13367T367TacAacG11B.1.5950.000261
ORF1ab/nsp13367T367IaCaaTa11B.1.5970.00463
ORF1ab/nsp13367T367TacAacG11B.1.6090.000479
ORF1ab/nsp13367T367AAcaGca11B.1.617.20.000004
ORF1ab/nsp13367T367TacAacG11B.1.6210.000089
ORF1ab/nsp13367T367RaCaaGa11B.1.6360.006711
ORF1ab/nsp13367T367delACA---11B.340.013699
ORF1ab/nsp13367T367PAcaCca11B.350.007812
ORF1ab/nsp13367T367AAcaGca11B.550.00295
ORF1ab/nsp13367T367SAcaTca11C.350.000774
ORF1ab/nsp13367T367TacAacG11C.370.000116
ORF1ab/nsp13367T367IaCaaTa11L.10.001905
ORF1ab/nsp13367T367AAcaGca11P.10.000016
ORF1ab/nsp13367T367delACA---11P.10.000016
ORF1ab/nsp13367T367IaCaaTa11P.1.120.000484
ORF1ab/nsp13367T367IaCaaTa11P.1.140.000048
ORF1ab/nsp13367T367IaCaaTa11P.1.150.000232
ORF1ab/nsp13367T367IaCaaTa11P.1.170.000162
ORF1ab/nsp13367T367IaCaaTa11P.20.000187
ORF1ab/nsp13367T367IaCaaTa11Q.10.000126
ORF1ab/nsp13367T367KaCaaAa11Q.80.000165
ORF1ab/nsp13367T367TacAacG11Q.80.000165
ORF1ab/nsp13367T367IaCaaTa11Q.80.000165
ORF1ab/nsp13367T367IaCaaTa11R.10.00009