CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 364

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13364P364SP5688SnonsynCctTct474474117326-17328
ORF1ab/nsp13364P364PP5688PsynccTccC4593520.76688517326-17328
ORF1ab/nsp13364P364PP5688PsynccTccA459770.16775617326-17328
ORF1ab/nsp13364P364PP5688PsynccTccG459300.065359517326-17328
ORF1ab/nsp13364P364LP5688LnonsyncCtcTt156156117326-17328
ORF1ab/nsp13364P364HP5688HnonsyncCtcAt114114117326-17328
ORF1ab/nsp13364P364delP5688deldelCCT---44117326-17328
ORF1ab/nsp13364P364AP5688AnonsynCctGct22117326-17328
ORF1ab/nsp13364P364TP5688TnonsynCctAct11117326-17328

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13364P364SCctTct474474All0.000091
ORF1ab/nsp13364P364PccTccC352459All0.000067
ORF1ab/nsp13364P364PccTccA77459All0.000015
ORF1ab/nsp13364P364PccTccG30459All0.000006
ORF1ab/nsp13364P364LcCtcTt156156All0.00003
ORF1ab/nsp13364P364PccTccC141144AY.250.000848
ORF1ab/nsp13364P364PccTccA2144AY.250.000012
ORF1ab/nsp13364P364PccTccG1144AY.250.000006
ORF1ab/nsp13364P364HcCtcAt114114All0.000022
ORF1ab/nsp13364P364SCctTct8181AY.440.000493
ORF1ab/nsp13364P364PccTccC3473AY.40.000053
ORF1ab/nsp13364P364PccTccA3273AY.40.00005
ORF1ab/nsp13364P364PccTccG773AY.40.000011
ORF1ab/nsp13364P364SCctTct5959AY.40.000092
ORF1ab/nsp13364P364SCctTct4646C.370.005339
ORF1ab/nsp13364P364PccTccC4046P.10.00063
ORF1ab/nsp13364P364PccTccG446P.10.000063
ORF1ab/nsp13364P364PccTccA246P.10.000032
ORF1ab/nsp13364P364PccTccC2939B.1.1.70.000026
ORF1ab/nsp13364P364PccTccA939B.1.1.70.000008
ORF1ab/nsp13364P364PccTccG139B.1.1.70.000001
ORF1ab/nsp13364P364SCctTct3232B.1.617.20.00012
ORF1ab/nsp13364P364SCctTct3131B.1.1.70.000028
ORF1ab/nsp13364P364PccTccC2323B.1.4290.000541
ORF1ab/nsp13364P364SCctTct2222B.1.20.000194
ORF1ab/nsp13364P364HcCtcAt2121B.1.1.70.000019
ORF1ab/nsp13364P364LcCtcTt2121B.1.1.70.000019
ORF1ab/nsp13364P364LcCtcTt2020B.1.1.3250.512821
ORF1ab/nsp13364P364HcCtcAt1717AY.290.000268
ORF1ab/nsp13364P364SCctTct1717B.10.000156
ORF1ab/nsp13364P364SCctTct1616AY.390.000395
ORF1ab/nsp13364P364PccTccC915AY.430.00004
ORF1ab/nsp13364P364PccTccG615AY.430.000027
ORF1ab/nsp13364P364SCctTct1414AY.1030.000087
ORF1ab/nsp13364P364LcCtcTt1313AY.40.00002
ORF1ab/nsp13364P364PccTccC1013B.1.617.20.000038
ORF1ab/nsp13364P364PccTccG213B.1.617.20.000008
ORF1ab/nsp13364P364PccTccA113B.1.617.20.000004
ORF1ab/nsp13364P364SCctTct1212A.10.003382
ORF1ab/nsp13364P364SCctTct1212AY.250.000072
ORF1ab/nsp13364P364SCctTct1111B.1.438.10.00118
ORF1ab/nsp13364P364PccTccA910AY.50.000186
ORF1ab/nsp13364P364PccTccC110AY.50.000021
ORF1ab/nsp13364P364LcCtcTt99B.1.617.20.000034
ORF1ab/nsp13364P364HcCtcAt88AY.250.000048
ORF1ab/nsp13364P364SCctTct88B.1.10.000145
ORF1ab/nsp13364P364PccTccC88B.1.1.2860.023188
ORF1ab/nsp13364P364HcCtcAt77B.1.1.2220.001428
ORF1ab/nsp13364P364LcCtcTt77B.1.3510.000208
ORF1ab/nsp13364P364PccTccC56B.10.000046
ORF1ab/nsp13364P364PccTccA16B.10.000009
ORF1ab/nsp13364P364HcCtcAt55AY.40.000008
ORF1ab/nsp13364P364SCctTct55AY.430.000022
ORF1ab/nsp13364P364PccTccA55AY.470.000156
ORF1ab/nsp13364P364LcCtcTt55B.1.1770.000066
ORF1ab/nsp13364P364LcCtcTt55B.1.20.000044
ORF1ab/nsp13364P364HcCtcAt55B.1.20.000044
ORF1ab/nsp13364P364LcCtcTt55P.10.000079
ORF1ab/nsp13364P364delCCT---44All0.000001
ORF1ab/nsp13364P364PccTccC44AY.1030.000025
ORF1ab/nsp13364P364LcCtcTt44AY.250.000024
ORF1ab/nsp13364P364PccTccG44AY.280.007561
ORF1ab/nsp13364P364HcCtcAt44AY.330.000267
ORF1ab/nsp13364P364SCctTct44AY.4.20.000087
ORF1ab/nsp13364P364SCctTct44AY.4.50.00043
ORF1ab/nsp13364P364LcCtcTt44AY.430.000018
ORF1ab/nsp13364P364PccTccC34AY.440.000018
ORF1ab/nsp13364P364PccTccG14AY.440.000006
ORF1ab/nsp13364P364LcCtcTt44B.10.000037
ORF1ab/nsp13364P364PccTccC44B.1.1.5190.000159
ORF1ab/nsp13364P364SCctTct44B.1.1.5230.00625
ORF1ab/nsp13364P364SCctTct44B.1.2390.004884
ORF1ab/nsp13364P364PccTccC34B.1.360.000438
ORF1ab/nsp13364P364PccTccA14B.1.360.000146
ORF1ab/nsp13364P364SCctTct44B.1.5960.000349
ORF1ab/nsp13364P364PccTccC44C.260.029412
ORF1ab/nsp13364P364SCctTct44P.1.170.000647
ORF1ab/nsp13364P364LcCtcTt33AY.1020.00008
ORF1ab/nsp13364P364HcCtcAt33AY.1190.000106
ORF1ab/nsp13364P364LcCtcTt33AY.390.000074
ORF1ab/nsp13364P364SCctTct33AY.420.000121
ORF1ab/nsp13364P364HcCtcAt33AY.430.000013
ORF1ab/nsp13364P364SCctTct33AY.450.000365
ORF1ab/nsp13364P364PccTccA33B.1.1.3160.002775
ORF1ab/nsp13364P364PccTccC33B.1.1.370.000579
ORF1ab/nsp13364P364HcCtcAt33B.1.1.630.001157
ORF1ab/nsp13364P364SCctTct33B.1.351.20.000908
ORF1ab/nsp13364P364LcCtcTt33B.1.4410.028846
ORF1ab/nsp13364P364LcCtcTt33B.1.5880.00273
ORF1ab/nsp13364P364SCctTct33B.1.617.10.000387
ORF1ab/nsp13364P364HcCtcAt33B.1.617.20.000011
ORF1ab/nsp13364P364SCctTct33P.10.000047
ORF1ab/nsp13364P364ACctGct22All0
ORF1ab/nsp13364P364HcCtcAt22AY.1000.000092
ORF1ab/nsp13364P364HcCtcAt22AY.1030.000012
ORF1ab/nsp13364P364SCctTct22AY.1180.000125
ORF1ab/nsp13364P364LcCtcTt22AY.1200.000074
ORF1ab/nsp13364P364LcCtcTt22AY.120.2.10.000997
ORF1ab/nsp13364P364SCctTct22AY.290.000032
ORF1ab/nsp13364P364PccTccC22AY.30.00002
ORF1ab/nsp13364P364SCctTct22AY.3.10.000171
ORF1ab/nsp13364P364SCctTct22AY.330.000134
ORF1ab/nsp13364P364SCctTct22AY.460.000208
ORF1ab/nsp13364P364HcCtcAt22AY.710.00095
ORF1ab/nsp13364P364PccTccC22B.1.10.000036
ORF1ab/nsp13364P364PccTccC22B.1.1.10.000653
ORF1ab/nsp13364P364LcCtcTt22B.1.1.500.001358
ORF1ab/nsp13364P364PccTccA22B.1.1.630.000772
ORF1ab/nsp13364P364PccTccC22B.1.1770.000026
ORF1ab/nsp13364P364SCctTct22B.1.177.100.001756
ORF1ab/nsp13364P364LcCtcTt22B.1.177.50.002484
ORF1ab/nsp13364P364SCctTct22B.1.177.600.000437
ORF1ab/nsp13364P364PccTccC22B.1.177.670.015267
ORF1ab/nsp13364P364PccTccC12B.1.20.000009
ORF1ab/nsp13364P364PccTccA12B.1.20.000009
ORF1ab/nsp13364P364SCctTct22B.1.2400.000431
ORF1ab/nsp13364P364SCctTct22B.1.4200.020833
ORF1ab/nsp13364P364SCctTct22B.1.5090.001732
ORF1ab/nsp13364P364SCctTct22B.1.5950.000522
ORF1ab/nsp13364P364SCctTct22B.6.80.016529
ORF1ab/nsp13364P364SCctTct22C.350.001548
ORF1ab/nsp13364P364HcCtcAt22C.370.000232
ORF1ab/nsp13364P364SCctTct22C.37.10.005236
ORF1ab/nsp13364P364PccTccC22P.20.000373
ORF1ab/nsp13364P364PccTccG11A.20.000662
ORF1ab/nsp13364P364LcCtcTt11A.2.20.001689
ORF1ab/nsp13364P364HcCtcAt11AD.20.000219
ORF1ab/nsp13364P364TCctAct11All0
ORF1ab/nsp13364P364delCCT---11AU.30.00211
ORF1ab/nsp13364P364PccTccC11AY.1000.000046
ORF1ab/nsp13364P364PccTccG11AY.1010.00049
ORF1ab/nsp13364P364LcCtcTt11AY.1030.000006
ORF1ab/nsp13364P364SCctTct11AY.1070.000466
ORF1ab/nsp13364P364LcCtcTt11AY.1180.000063
ORF1ab/nsp13364P364SCctTct11AY.1190.000035
ORF1ab/nsp13364P364PccTccA11AY.1190.000035
ORF1ab/nsp13364P364PccTccA11AY.1200.000037
ORF1ab/nsp13364P364SCctTct11AY.1200.000037
ORF1ab/nsp13364P364SCctTct11AY.160.00038
ORF1ab/nsp13364P364SCctTct11AY.200.000039
ORF1ab/nsp13364P364HcCtcAt11AY.200.000039
ORF1ab/nsp13364P364PccTccA11AY.200.000039
ORF1ab/nsp13364P364ACctGct11AY.200.000039
ORF1ab/nsp13364P364LcCtcTt11AY.230.00007
ORF1ab/nsp13364P364PccTccC11AY.230.00007
ORF1ab/nsp13364P364HcCtcAt11AY.230.00007
ORF1ab/nsp13364P364PccTccA11AY.260.000028
ORF1ab/nsp13364P364LcCtcTt11AY.290.000016
ORF1ab/nsp13364P364PccTccC11AY.290.000016
ORF1ab/nsp13364P364HcCtcAt11AY.29.10.000221
ORF1ab/nsp13364P364HcCtcAt11AY.30.00001
ORF1ab/nsp13364P364SCctTct11AY.30.00001
ORF1ab/nsp13364P364HcCtcAt11AY.390.000025
ORF1ab/nsp13364P364HcCtcAt11AY.39.10.00004
ORF1ab/nsp13364P364PccTccA11AY.4.10.000737
ORF1ab/nsp13364P364LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp13364P364LcCtcTt11AY.4.50.000107
ORF1ab/nsp13364P364SCctTct11AY.410.000294
ORF1ab/nsp13364P364LcCtcTt11AY.440.000006
ORF1ab/nsp13364P364SCctTct11AY.46.60.000072
ORF1ab/nsp13364P364PccTccC11AY.46.60.000072
ORF1ab/nsp13364P364HcCtcAt11AY.50.000021
ORF1ab/nsp13364P364PccTccA11AY.5.40.000277
ORF1ab/nsp13364P364PccTccC11AY.500.000799
ORF1ab/nsp13364P364HcCtcAt11AY.520.000814
ORF1ab/nsp13364P364delCCT---11AY.540.000095
ORF1ab/nsp13364P364LcCtcTt11AY.570.000656
ORF1ab/nsp13364P364ACctGct11AY.590.00053
ORF1ab/nsp13364P364HcCtcAt11AY.610.000105
ORF1ab/nsp13364P364SCctTct11AY.670.000464
ORF1ab/nsp13364P364LcCtcTt11AY.75.10.00018
ORF1ab/nsp13364P364HcCtcAt11AY.75.10.00018
ORF1ab/nsp13364P364HcCtcAt11AY.850.000427
ORF1ab/nsp13364P364LcCtcTt11AY.90.000068
ORF1ab/nsp13364P364SCctTct11AY.90.000068
ORF1ab/nsp13364P364SCctTct11AY.9.20.000037
ORF1ab/nsp13364P364LcCtcTt11AY.950.000761
ORF1ab/nsp13364P364HcCtcAt11AY.960.002075
ORF1ab/nsp13364P364SCctTct11AY.960.002075
ORF1ab/nsp13364P364LcCtcTt11AY.980.000079
ORF1ab/nsp13364P364PccTccA11AY.98.10.000048
ORF1ab/nsp13364P364TCctAct11B.10.000009
ORF1ab/nsp13364P364HcCtcAt11B.10.000009
ORF1ab/nsp13364P364LcCtcTt11B.1.10.000018
ORF1ab/nsp13364P364SCctTct11B.1.1.1210.002427
ORF1ab/nsp13364P364PccTccA11B.1.1.1580.012195
ORF1ab/nsp13364P364PccTccG11B.1.1.1980.001468
ORF1ab/nsp13364P364SCctTct11B.1.1.2140.000055
ORF1ab/nsp13364P364SCctTct11B.1.1.2220.000204
ORF1ab/nsp13364P364SCctTct11B.1.1.2310.003096
ORF1ab/nsp13364P364SCctTct11B.1.1.2400.004695
ORF1ab/nsp13364P364PccTccC11B.1.1.2750.011236
ORF1ab/nsp13364P364LcCtcTt11B.1.1.2840.000107
ORF1ab/nsp13364P364SCctTct11B.1.1.2970.002237
ORF1ab/nsp13364P364SCctTct11B.1.1.3060.000438
ORF1ab/nsp13364P364PccTccC11B.1.1.330.000421
ORF1ab/nsp13364P364LcCtcTt11B.1.1.3720.000689
ORF1ab/nsp13364P364PccTccA11B.1.1.3770.001381
ORF1ab/nsp13364P364HcCtcAt11B.1.1.3880.045455
ORF1ab/nsp13364P364HcCtcAt11B.1.1.4170.002703
ORF1ab/nsp13364P364LcCtcTt11B.1.1.510.001718
ORF1ab/nsp13364P364SCctTct11B.1.1310.008772
ORF1ab/nsp13364P364PccTccC11B.1.140.017544
ORF1ab/nsp13364P364SCctTct11B.1.1470.000756
ORF1ab/nsp13364P364LcCtcTt11B.1.160.260.002421
ORF1ab/nsp13364P364SCctTct11B.1.1770.000013
ORF1ab/nsp13364P364LcCtcTt11B.1.177.200.001517
ORF1ab/nsp13364P364SCctTct11B.1.177.30.007634
ORF1ab/nsp13364P364LcCtcTt11B.1.177.520.001757
ORF1ab/nsp13364P364LcCtcTt11B.1.177.570.000281
ORF1ab/nsp13364P364SCctTct11B.1.177.790.002342
ORF1ab/nsp13364P364PccTccC11B.1.2060.000816
ORF1ab/nsp13364P364SCctTct11B.1.2140.003663
ORF1ab/nsp13364P364PccTccC11B.1.2210.000071
ORF1ab/nsp13364P364PccTccC11B.1.2340.000132
ORF1ab/nsp13364P364SCctTct11B.1.2430.00007
ORF1ab/nsp13364P364LcCtcTt11B.1.258.210.007752
ORF1ab/nsp13364P364SCctTct11B.1.258.220.002667
ORF1ab/nsp13364P364LcCtcTt11B.1.2810.021739
ORF1ab/nsp13364P364LcCtcTt11B.1.3110.000275
ORF1ab/nsp13364P364HcCtcAt11B.1.3210.034483
ORF1ab/nsp13364P364SCctTct11B.1.3490.000715
ORF1ab/nsp13364P364PccTccC11B.1.3510.00003
ORF1ab/nsp13364P364SCctTct11B.1.3510.00003
ORF1ab/nsp13364P364LcCtcTt11B.1.351.20.000303
ORF1ab/nsp13364P364LcCtcTt11B.1.360.000146
ORF1ab/nsp13364P364HcCtcAt11B.1.360.000146
ORF1ab/nsp13364P364HcCtcAt11B.1.36.390.002217
ORF1ab/nsp13364P364SCctTct11B.1.3690.000285
ORF1ab/nsp13364P364PccTccC11B.1.3980.002976
ORF1ab/nsp13364P364SCctTct11B.1.400.019608
ORF1ab/nsp13364P364SCctTct11B.1.4000.000429
ORF1ab/nsp13364P364SCctTct11B.1.4080.00369
ORF1ab/nsp13364P364PccTccC11B.1.4270.00005
ORF1ab/nsp13364P364SCctTct11B.1.4270.00005
ORF1ab/nsp13364P364LcCtcTt11B.1.4270.00005
ORF1ab/nsp13364P364LcCtcTt11B.1.4380.006536
ORF1ab/nsp13364P364HcCtcAt11B.1.438.10.000107
ORF1ab/nsp13364P364LcCtcTt11B.1.4700.001404
ORF1ab/nsp13364P364LcCtcTt11B.1.4970.000315
ORF1ab/nsp13364P364PccTccC11B.1.5250.000113
ORF1ab/nsp13364P364SCctTct11B.1.5260.000024
ORF1ab/nsp13364P364LcCtcTt11B.1.5260.000024
ORF1ab/nsp13364P364HcCtcAt11B.1.5260.000024
ORF1ab/nsp13364P364SCctTct11B.1.5640.000426
ORF1ab/nsp13364P364LcCtcTt11B.1.5640.000426
ORF1ab/nsp13364P364HcCtcAt11B.1.5820.000491
ORF1ab/nsp13364P364PccTccG11B.1.5960.000087
ORF1ab/nsp13364P364LcCtcTt11B.1.5960.000087
ORF1ab/nsp13364P364LcCtcTt11B.1.6040.017241
ORF1ab/nsp13364P364LcCtcTt11B.1.6210.000089
ORF1ab/nsp13364P364PccTccC11B.1.6210.000089
ORF1ab/nsp13364P364HcCtcAt11B.1.621.10.000506
ORF1ab/nsp13364P364SCctTct11B.1.621.10.000506
ORF1ab/nsp13364P364SCctTct11B.1.910.002075
ORF1ab/nsp13364P364delCCT---11B.340.013699
ORF1ab/nsp13364P364SCctTct11C.140.004329
ORF1ab/nsp13364P364PccTccC11C.140.004329
ORF1ab/nsp13364P364LcCtcTt11C.160.00106
ORF1ab/nsp13364P364LcCtcTt11C.360.000911
ORF1ab/nsp13364P364LcCtcTt11C.370.000116
ORF1ab/nsp13364P364HcCtcAt11M.10.023256
ORF1ab/nsp13364P364delCCT---11P.10.000016
ORF1ab/nsp13364P364PccTccC11P.1.120.000484
ORF1ab/nsp13364P364LcCtcTt11P.1.140.000048
ORF1ab/nsp13364P364HcCtcAt11P.1.140.000048
ORF1ab/nsp13364P364SCctTct11Q.20.000613
ORF1ab/nsp13364P364HcCtcAt11Q.20.000613
ORF1ab/nsp13364P364SCctTct11R.10.00009
ORF1ab/nsp13364P364HcCtcAt11R.10.00009