CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 348 | V348L | V5672L | nonsyn | Gtg | Ttg | 7169 | 7092 | 0.989259 | 17278-17280 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 7092 | 7169 | All | 0.001356 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3366 | 3369 | AY.4 | 0.005239 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 388 | 397 | B.1.1.7 | 0.000347 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 357 | 357 | B.1.1.303 | 0.986188 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 297 | 297 | B.1.177.23 | 0.961165 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 224 | 239 | B.1.617.2 | 0.000843 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 165 | 165 | AY.5 | 0.003407 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 143 | 144 | AY.103 | 0.000888 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 133 | 134 | B.1.621 | 0.011773 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 99 | 100 | B.1.177 | 0.001304 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 88 | 89 | AY.44 | 0.000536 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 88 | 89 | B.1.2 | 0.000775 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 85 | 85 | AY.102 | 0.002254 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 83 | 85 | AY.43 | 0.000368 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 71 | 71 | AY.29 | 0.00112 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 68 | 70 | B.1 | 0.000623 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 64 | 65 | AY.3 | 0.000637 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 60 | 60 | AY.25 | 0.000361 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 51 | 51 | B.1.589 | 0.386364 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 44 | 44 | P.1.17 | 0.007117 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 42 | 42 | A.2.5 | 0.020958 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 40 | 40 | B.1.559 | 1 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 37 | 37 | B.1.1 | 0.000671 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 36 | 36 | AY.33 | 0.002404 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 36 | 36 | AY.46.4 | 0.005922 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 34 | 34 | AY.39 | 0.00084 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 31 | 31 | P.1 | 0.000488 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 28 | AY.91 | 0.002191 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 27 | 27 | AY.98.1 | 0.001308 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 26 | 26 | B.1.1.420 | 0.026157 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 24 | 24 | B.1.1.377 | 0.033149 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 24 | 24 | B.1.617.1 | 0.003095 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 21 | 21 | AY.20 | 0.000816 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 21 | 21 | AY.4.5 | 0.002257 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 21 | 21 | AY.42 | 0.000845 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 21 | 21 | B.1.628 | 0.0074 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 18 | 18 | AY.37 | 0.005689 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 18 | 18 | AY.99.2 | 0.001659 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 18 | 18 | B.1.1.519 | 0.000715 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 18 | 18 | B.1.429 | 0.000424 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 17 | 17 | AY.120 | 0.000632 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 16 | 16 | B.1.526 | 0.000376 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 15 | 15 | AY.4.2 | 0.000325 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 14 | 14 | AU.3 | 0.029536 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 14 | 14 | AY.121 | 0.001894 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 14 | 14 | AY.47 | 0.000435 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 14 | 14 | B.1.427 | 0.000707 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 12 | 12 | AY.9 | 0.000811 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 11 | 11 | AY.4.2.1 | 0.001639 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 11 | 11 | AY.45 | 0.001339 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 11 | 11 | AY.74 | 0.001272 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 11 | 11 | AY.75 | 0.000616 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 11 | 11 | AY.9.2 | 0.000404 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 10 | 10 | AY.117 | 0.000845 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 10 | 10 | AY.23 | 0.000697 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 10 | 10 | B.1.36 | 0.001459 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 10 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 10 | 10 | C.36 | 0.009107 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 9 | 9 | AY.118 | 0.000564 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 9 | 9 | AY.46 | 0.000937 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 9 | 9 | B.1.466.2 | 0.003521 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 8 | 8 | AY.100 | 0.000368 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 8 | 8 | AY.27 | 0.000518 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 8 | 8 | AY.70 | 0.001668 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 8 | 8 | B.1.609 | 0.003835 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 7 | AY.13 | 0.000966 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 7 | 7 | AY.3.1 | 0.000597 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 7 | 7 | AY.30 | 0.00277 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 7 | 7 | B.1.177.73 | 0.003964 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 6 | AY.106 | 0.002009 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 6 | B.1.36.29 | 0.003104 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | A.2.5.3 | 0.051546 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.39.1 | 0.000198 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.84 | 0.002187 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.85 | 0.002136 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | B.1.1.170 | 0.006234 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | B.1.1.277 | 0.003794 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | B.1.595.1 | 0.02924 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 5 | 5 | Q.1 | 0.000632 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.120.1 | 0.001284 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.4.4 | 0.001637 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.64 | 0.002381 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.7.2 | 0.002237 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | B.1.1.284 | 0.00043 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | B.1.177.32 | 0.005398 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 4 | 4 | B.1.509 | 0.003463 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.120.2.1 | 0.001495 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.51 | 0.002727 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.71 | 0.001425 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.77 | 0.003382 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.88 | 0.002653 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | AY.95 | 0.002283 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B | 0.000383 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.1.186 | 0.010309 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.111 | 0.003525 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.177.75 | 0.003122 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.36.17 | 0.001482 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 3 | B.1.369 | 0.000285 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.497 | 0.000944 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.599 | 0.010949 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.160.20 | 0.017857 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.177.85 | 0.01087 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.222 | 0.003384 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.258.16 | 0.003273 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.351.5 | 0.001199 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.36.9 | 0.006431 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.579 | 0.022472 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.113 | 0.006993 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.187 | 0.00885 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.3 | 0.008696 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.425 | 0.045455 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.429 | 0.004608 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.115 | 0.021739 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.192 | 0.009259 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.532 | 0.006211 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | C.2.1 | 0.006667 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | N.8 | 0.03125 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | P.1.11 | 0.010204 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp13 | 348 | V348L | Gtg | Ttg | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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