CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 34 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1334V34VV5358VsyngtCgtT22515224900.9988916336-16338

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1334V34VgtCgtT2249022515All0.004301
ORF1ab/nsp1334V34VgtCgtT1502715027AY.270.972558
ORF1ab/nsp1334V34VgtCgtT26972699AY.40.004198
ORF1ab/nsp1334V34VgtCgtT11991199B.1.351.50.718825
ORF1ab/nsp1334V34VgtCgtT531531B.1.617.20.001999
ORF1ab/nsp1334V34VgtCgtT412416B.1.1.70.000369
ORF1ab/nsp1334V34VgtCgtT183183AY.390.004522
ORF1ab/nsp1334V34VgtCgtT158158B.1.20.001391
ORF1ab/nsp1334V34VgtCgtT148149AY.30.001472
ORF1ab/nsp1334V34VgtCgtT131131B.1.10.002376
ORF1ab/nsp1334V34VgtCgtT117117AY.440.000712
ORF1ab/nsp1334V34VgtCgtT115115AY.430.00051
ORF1ab/nsp1334V34VgtCgtT111111B.1.4270.005605
ORF1ab/nsp1334V34VgtCgtT106106AY.1020.00281
ORF1ab/nsp1334V34VgtCgtT102104B.1.1770.001343
ORF1ab/nsp1334V34VgtCgtT6868P.10.001071
ORF1ab/nsp1334V34VgtCgtT6767AY.370.021176
ORF1ab/nsp1334V34VgtCgtT6565AY.250.000391
ORF1ab/nsp1334V34VgtCgtT6565B.1.5260.001528
ORF1ab/nsp1334V34VgtCgtT5555B.1.2210.003907
ORF1ab/nsp1334V34VgtCgtT5052B.10.000458
ORF1ab/nsp1334V34VgtCgtT4242AY.990.044071
ORF1ab/nsp1334V34VgtCgtT3838B.1.258.170.003951
ORF1ab/nsp1334V34VgtCgtT3636AY.330.002404
ORF1ab/nsp1334V34VgtCgtT3434B.1.438.10.003647
ORF1ab/nsp1334V34VgtCgtT3030AY.1030.000186
ORF1ab/nsp1334V34VgtCgtT3030B.1.4290.000706
ORF1ab/nsp1334V34VgtCgtT2828B.1.2580.001863
ORF1ab/nsp1334V34VgtCgtT2324AY.420.000925
ORF1ab/nsp1334V34VgtCgtT2424B.1.2430.00167
ORF1ab/nsp1334V34VgtCgtT2323C.370.002669
ORF1ab/nsp1334V34VgtCgtT2122B.1.3510.000624
ORF1ab/nsp1334V34VgtCgtT2121AY.980.001659
ORF1ab/nsp1334V34VgtCgtT2020C.300.034542
ORF1ab/nsp1334V34VgtCgtT2020P.1.70.006386
ORF1ab/nsp1334V34VgtCgtT1919AY.1060.006363
ORF1ab/nsp1334V34VgtCgtT1919AY.200.000738
ORF1ab/nsp1334V34VgtCgtT1919AY.740.002197
ORF1ab/nsp1334V34VgtCgtT1818AY.160.006834
ORF1ab/nsp1334V34VgtCgtT1717AY.1080.018743
ORF1ab/nsp1334V34VgtCgtT1717B.1.4000.007293
ORF1ab/nsp1334V34VgtCgtT1616AY.470.000498
ORF1ab/nsp1334V34VgtCgtT1616B.1.240.10.4
ORF1ab/nsp1334V34VgtCgtT1515AY.46.60.001083
ORF1ab/nsp1334V34VgtCgtT1515AY.50.00031
ORF1ab/nsp1334V34VgtCgtT1414AY.260.000396
ORF1ab/nsp1334V34VgtCgtT1414AY.99.20.00129
ORF1ab/nsp1334V34VgtCgtT1212B.1.1.5190.000477
ORF1ab/nsp1334V34VgtCgtT1112B.1.1600.000343
ORF1ab/nsp1334V34VgtCgtT1111AY.1150.057292
ORF1ab/nsp1334V34VgtCgtT811AY.1190.000282
ORF1ab/nsp1334V34VgtCgtT1111AY.75.10.001983
ORF1ab/nsp1334V34VgtCgtT1010B.1.1.630.003858
ORF1ab/nsp1334V34VgtCgtT99AY.39.10.000357
ORF1ab/nsp1334V34VgtCgtT99AY.750.000504
ORF1ab/nsp1334V34VgtCgtT99B.1.36.290.004656
ORF1ab/nsp1334V34VgtCgtT88AY.1200.000297
ORF1ab/nsp1334V34VgtCgtT78AY.4.50.000752
ORF1ab/nsp1334V34VgtCgtT77AY.460.000729
ORF1ab/nsp1334V34VgtCgtT77AY.610.000733
ORF1ab/nsp1334V34VgtCgtT77B.1.1.4120.053435
ORF1ab/nsp1334V34VgtCgtT77B.1.177.570.001967
ORF1ab/nsp1334V34VgtCgtT77B.1.2400.001509
ORF1ab/nsp1334V34VgtCgtT77B.1.6210.00062
ORF1ab/nsp1334V34VgtCgtT66AY.1170.000507
ORF1ab/nsp1334V34VgtCgtT66AY.290.000095
ORF1ab/nsp1334V34VgtCgtT66AY.3.10.000512
ORF1ab/nsp1334V34VgtCgtT56AY.90.000338
ORF1ab/nsp1334V34VgtCgtT66B.1.1.2220.001224
ORF1ab/nsp1334V34VgtCgtT66B.1.1790.022556
ORF1ab/nsp1334V34VgtCgtT66B.1.360.000875
ORF1ab/nsp1334V34VgtCgtT66P.1.140.000287
ORF1ab/nsp1334V34VgtCgtT55AY.340.000485
ORF1ab/nsp1334V34VgtCgtT55AY.4.20.000108
ORF1ab/nsp1334V34VgtCgtT55AY.540.000477
ORF1ab/nsp1334V34VgtCgtT55AY.620.002179
ORF1ab/nsp1334V34VgtCgtT55AY.98.10.000242
ORF1ab/nsp1334V34VgtCgtT55B.1.36.310.008757
ORF1ab/nsp1334V34VgtCgtT55B.1.4150.071429
ORF1ab/nsp1334V34VgtCgtT55R.10.00045
ORF1ab/nsp1334V34VgtCgtT44AY.1160.001147
ORF1ab/nsp1334V34VgtCgtT44AY.230.000279
ORF1ab/nsp1334V34VgtCgtT44AY.450.000487
ORF1ab/nsp1334V34VgtCgtT44AY.690.000747
ORF1ab/nsp1334V34VgtCgtT44AY.790.004843
ORF1ab/nsp1334V34VgtCgtT44AY.9.10.000335
ORF1ab/nsp1334V34VgtCgtT44B.1.1.2140.000222
ORF1ab/nsp1334V34VgtCgtT14B.1.177.70.000165
ORF1ab/nsp1334V34VgtCgtT44B.1.2340.000528
ORF1ab/nsp1334V34VgtCgtT44B.1.3060.022857
ORF1ab/nsp1334V34VgtCgtT44B.1.5750.001214
ORF1ab/nsp1334V34VgtCgtT44B.1.621.10.002023
ORF1ab/nsp1334V34VgtCgtT33AY.1100.000338
ORF1ab/nsp1334V34VgtCgtT33AY.46.40.000494
ORF1ab/nsp1334V34VgtCgtT33AY.850.001282
ORF1ab/nsp1334V34VgtCgtT33AY.910.002191
ORF1ab/nsp1334V34VgtCgtT33AY.930.000819
ORF1ab/nsp1334V34VgtCgtT33B0.000383
ORF1ab/nsp1334V34VgtCgtT33B.1.1.4320.003797
ORF1ab/nsp1334V34VgtCgtT33B.1.177.120.000455
ORF1ab/nsp1334V34VgtCgtT33B.1.177.440.001557
ORF1ab/nsp1334V34VgtCgtT33B.1.36.390.006652
ORF1ab/nsp1334V34VgtCgtT33B.1.3690.000856
ORF1ab/nsp1334V34VgtCgtT33B.1.3960.002117
ORF1ab/nsp1334V34VgtCgtT33B.1.5640.001278
ORF1ab/nsp1334V34VgtCgtT33B.1.5960.000261
ORF1ab/nsp1334V34VgtCgtT23B.1.617.10.000258
ORF1ab/nsp1334V34VgtCgtT33B.1.619.10.001924
ORF1ab/nsp1334V34VgtCgtT33N.30.017442
ORF1ab/nsp1334V34VgtCgtT33P.1.150.000697
ORF1ab/nsp1334V34VgtCgtT33Q.40.001364
ORF1ab/nsp1334V34VgtCgtT22A.270.003311
ORF1ab/nsp1334V34VgtCgtT22AD.20.000438
ORF1ab/nsp1334V34VgtCgtT22AY.1000.000092
ORF1ab/nsp1334V34VgtCgtT22AY.1040.003968
ORF1ab/nsp1334V34VgtCgtT22AY.1130.000285
ORF1ab/nsp1334V34VgtCgtT22AY.220.004184
ORF1ab/nsp1334V34VgtCgtT22AY.4.2.10.000298
ORF1ab/nsp1334V34VgtCgtT22AY.410.000588
ORF1ab/nsp1334V34VgtCgtT22AY.60.000082
ORF1ab/nsp1334V34VgtCgtT22AY.670.000929
ORF1ab/nsp1334V34VgtCgtT22AY.710.00095
ORF1ab/nsp1334V34VgtCgtT22AY.840.000875
ORF1ab/nsp1334V34VgtCgtT22AZ.30.00304
ORF1ab/nsp1334V34VgtCgtT22B.1.1.1660.066667
ORF1ab/nsp1334V34VgtCgtT22B.1.1.330.000842
ORF1ab/nsp1334V34VgtCgtT22B.1.1.5260.007092
ORF1ab/nsp1334V34VgtCgtT22B.1.1.830.00542
ORF1ab/nsp1334V34VgtCgtT22B.1.1040.00738
ORF1ab/nsp1334V34VgtCgtT22B.1.177.190.002861
ORF1ab/nsp1334V34VgtCgtT22B.1.177.320.002699
ORF1ab/nsp1334V34VgtCgtT22B.1.177.40.000422
ORF1ab/nsp1334V34VgtCgtT22B.1.177.50.002484
ORF1ab/nsp1334V34VgtCgtT22B.1.2390.002442
ORF1ab/nsp1334V34VgtCgtT22B.1.36.80.002
ORF1ab/nsp1334V34VgtCgtT22B.1.4090.001563
ORF1ab/nsp1334V34VgtCgtT22B.1.4620.014493
ORF1ab/nsp1334V34VgtCgtT22B.1.4990.002101
ORF1ab/nsp1334V34VgtCgtT22B.1.6040.034483
ORF1ab/nsp1334V34VgtCgtT22B.1.6200.001892
ORF1ab/nsp1334V34VgtCgtT12B.6.60.000889
ORF1ab/nsp1334V34VgtCgtT22C.380.016129
ORF1ab/nsp1334V34VgtCgtT22D.20.00015
ORF1ab/nsp1334V34VgtCgtT22P.1.170.000324
ORF1ab/nsp1334V34VgtCgtT22P.40.007605
ORF1ab/nsp1334V34VgtCgtT22Q.30.00029
ORF1ab/nsp1334V34VgtCgtT11A.10.000282
ORF1ab/nsp1334V34VgtCgtT11A.30.002096
ORF1ab/nsp1334V34VgtCgtT11AY.10.000396
ORF1ab/nsp1334V34VgtCgtT11AY.1050.000643
ORF1ab/nsp1334V34VgtCgtT11AY.110.001339
ORF1ab/nsp1334V34VgtCgtT11AY.1110.000183
ORF1ab/nsp1334V34VgtCgtT11AY.140.000088
ORF1ab/nsp1334V34VgtCgtT11AY.170.008197
ORF1ab/nsp1334V34VgtCgtT11AY.23.10.000417
ORF1ab/nsp1334V34VgtCgtT11AY.29.10.000221
ORF1ab/nsp1334V34VgtCgtT11AY.4.30.000842
ORF1ab/nsp1334V34VgtCgtT11AY.46.10.001027
ORF1ab/nsp1334V34VgtCgtT11AY.46.20.000635
ORF1ab/nsp1334V34VgtCgtT11AY.5.30.000337
ORF1ab/nsp1334V34VgtCgtT11AY.5.40.000277
ORF1ab/nsp1334V34VgtCgtT11AY.530.000288
ORF1ab/nsp1334V34VgtCgtT11AY.560.001605
ORF1ab/nsp1334V34VgtCgtT11AY.590.00053
ORF1ab/nsp1334V34VgtCgtT11AY.600.000938
ORF1ab/nsp1334V34VgtCgtT11AY.630.000387
ORF1ab/nsp1334V34VgtCgtT11AY.650.000533
ORF1ab/nsp1334V34VgtCgtT11AY.660.00107
ORF1ab/nsp1334V34VgtCgtT11AY.7.20.000559
ORF1ab/nsp1334V34VgtCgtT11AY.800.001129
ORF1ab/nsp1334V34VgtCgtT11AY.860.00083
ORF1ab/nsp1334V34VgtCgtT11AY.9.20.000037
ORF1ab/nsp1334V34VgtCgtT11B.1.1.10.000327
ORF1ab/nsp1334V34VgtCgtT11B.1.1.1180.010204
ORF1ab/nsp1334V34VgtCgtT11B.1.1.2280.003049
ORF1ab/nsp1334V34VgtCgtT11B.1.1.2310.003096
ORF1ab/nsp1334V34VgtCgtT11B.1.1.2840.000107
ORF1ab/nsp1334V34VgtCgtT11B.1.1.2940.001266
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3010.001179
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3040.002809
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3180.000302
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3480.000796
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3530.020833
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3680.003086
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3690.000446
ORF1ab/nsp1334V34VgtCgtT11B.1.1.370.000193
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3710.010417
ORF1ab/nsp1334V34VgtCgtT11B.1.1.3800.009804
ORF1ab/nsp1334V34VgtCgtT11B.1.1.390.00051
ORF1ab/nsp1334V34VgtCgtT11B.1.1.400.034483
ORF1ab/nsp1334V34VgtCgtT11B.1.1.4170.002703
ORF1ab/nsp1334V34VgtCgtT11B.1.1.4340.000349
ORF1ab/nsp1334V34VgtCgtT11B.1.1.4860.001577
ORF1ab/nsp1334V34VgtCgtT11B.1.1.500.000679
ORF1ab/nsp1334V34VgtCgtT11B.1.1.5250.005464
ORF1ab/nsp1334V34VgtCgtT11B.1.1280.000635
ORF1ab/nsp1334V34VgtCgtT11B.1.1340.005464
ORF1ab/nsp1334V34VgtCgtT11B.1.160.150.00495
ORF1ab/nsp1334V34VgtCgtT11B.1.160.230.004831
ORF1ab/nsp1334V34VgtCgtT11B.1.1690.014925
ORF1ab/nsp1334V34VgtCgtT11B.1.177.160.000664
ORF1ab/nsp1334V34VgtCgtT11B.1.177.600.000218
ORF1ab/nsp1334V34VgtCgtT11B.1.177.720.00339
ORF1ab/nsp1334V34VgtCgtT11B.1.1990.004132
ORF1ab/nsp1334V34VgtCgtT11B.1.258.50.008772
ORF1ab/nsp1334V34VgtCgtT11B.1.2930.0125
ORF1ab/nsp1334V34VgtCgtT11B.1.3110.000275
ORF1ab/nsp1334V34VgtCgtT11B.1.3200.001245
ORF1ab/nsp1334V34VgtCgtT11B.1.3240.001605
ORF1ab/nsp1334V34VgtCgtT11B.1.351.30.000876
ORF1ab/nsp1334V34VgtCgtT11B.1.36.170.000494
ORF1ab/nsp1334V34VgtCgtT11B.1.36.70.004
ORF1ab/nsp1334V34VgtCgtT11B.1.3750.00082
ORF1ab/nsp1334V34VgtCgtT11B.1.3780.006849
ORF1ab/nsp1334V34VgtCgtT11B.1.3890.001002
ORF1ab/nsp1334V34VgtCgtT11B.1.466.20.000391
ORF1ab/nsp1334V34VgtCgtT11B.1.5170.000427
ORF1ab/nsp1334V34VgtCgtT11B.1.5250.000113
ORF1ab/nsp1334V34VgtCgtT11B.1.5510.00129
ORF1ab/nsp1334V34VgtCgtT11B.1.5600.00463
ORF1ab/nsp1334V34VgtCgtT11B.1.5670.003333
ORF1ab/nsp1334V34VgtCgtT11B.1.5760.000907
ORF1ab/nsp1334V34VgtCgtT11B.1.5950.000261
ORF1ab/nsp1334V34VgtCgtT11B.1.6000.005848
ORF1ab/nsp1334V34VgtCgtT11B.1.6090.000479
ORF1ab/nsp1334V34VgtCgtT11B.1.6180.004032
ORF1ab/nsp1334V34VgtCgtT11B.1.6270.00202
ORF1ab/nsp1334V34VgtCgtT11B.1.6280.000352
ORF1ab/nsp1334V34VgtCgtT11B.1.6370.000073
ORF1ab/nsp1334V34VgtCgtT11B.560.028571
ORF1ab/nsp1334V34VgtCgtT11C.1.20.004255
ORF1ab/nsp1334V34VgtCgtT11N.50.001767
ORF1ab/nsp1334V34VgtCgtT11P.1.20.001156
ORF1ab/nsp1334V34VgtCgtT11P.20.000187
ORF1ab/nsp1334V34VgtCgtT11P.30.001595
ORF1ab/nsp1334V34VgtCgtT11P.60.003145