CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 34 | V34V | V5358V | syn | gtC | gtT | 22515 | 22490 | 0.99889 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34V | V5358V | syn | gtC | gtA | 22515 | 15 | 0.000666223 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34V | V5358V | syn | gtC | gtG | 22515 | 10 | 0.000444148 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34I | V5358I | nonsyn | Gtc | Atc | 156 | 155 | 0.99359 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34I | V5358I | nonsyn | GtC | AtA | 156 | 1 | 0.00641026 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34del | V5358del | del | GTC | --- | 74 | 74 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34A | V5358A | nonsyn | gTc | gCc | 31 | 31 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34F | V5358F | nonsyn | Gtc | Ttc | 24 | 24 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34S | V5358S | nonsyn | GTc | TCc | 8 | 8 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34L | V5358L | nonsyn | Gtc | Ctc | 7 | 6 | 0.857143 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34D | V5358D | nonsyn | gTc | gAc | 7 | 5 | 0.714286 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34D | V5358D | nonsyn | gTC | gAT | 7 | 2 | 0.285714 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34L | V5358L | nonsyn | GtC | CtT | 7 | 1 | 0.142857 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34Y | V5358Y | nonsyn | GTc | TAc | 4 | 2 | 0.5 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34Y | V5358Y | nonsyn | GTC | TAT | 4 | 2 | 0.5 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34del1 | V5358del1 | del | Gtc | -tc | 3 | 2 | 0.666667 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34del1 | V5358del1 | del | gtC | gt- | 3 | 1 | 0.333333 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34N | V5358N | nonsyn | GTC | AAT | 1 | 1 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34M | V5358M | nonsyn | GtC | AtG | 1 | 1 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34del2 | V5358del2 | del | GTc | --c | 1 | 1 | 1 | 16336-16338 |
ORF1ab/nsp13 | 34 | V34T | V5358T | nonsyn | GTC | ACA | 1 | 1 | 1 | 16336-16338 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 22490 | 22515 | All | 0.004301 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 15 | 22515 | All | 0.000003 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 10 | 22515 | All | 0.000002 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 15027 | 15027 | AY.27 | 0.972558 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2697 | 2699 | AY.4 | 0.004198 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 2 | 2699 | AY.4 | 0.000003 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1199 | 1199 | B.1.351.5 | 0.718825 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 531 | 531 | B.1.617.2 | 0.001999 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 412 | 416 | B.1.1.7 | 0.000369 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 3 | 416 | B.1.1.7 | 0.000003 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 1 | 416 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 183 | 183 | AY.39 | 0.004522 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 158 | 158 | B.1.2 | 0.001391 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 155 | 156 | All | 0.00003 |
ORF1ab/nsp13 | 34 | V34I | GtC | AtA | 1 | 156 | All | 0 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 148 | 149 | AY.3 | 0.001472 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 1 | 149 | AY.3 | 0.00001 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 131 | 131 | B.1.1 | 0.002376 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 117 | 117 | AY.44 | 0.000712 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 115 | 115 | AY.43 | 0.00051 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 111 | 111 | B.1.427 | 0.005605 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 106 | 106 | AY.102 | 0.00281 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 102 | 104 | B.1.177 | 0.001343 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 2 | 104 | B.1.177 | 0.000026 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 74 | 74 | All | 0.000014 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 68 | 68 | P.1 | 0.001071 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 67 | 67 | AY.37 | 0.021176 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 65 | 65 | AY.25 | 0.000391 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 65 | 65 | B.1.526 | 0.001528 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 55 | 55 | B.1.221 | 0.003907 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 50 | 52 | B.1 | 0.000458 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 2 | 52 | B.1 | 0.000018 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 42 | 42 | AY.99 | 0.044071 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 38 | 38 | B.1.258.17 | 0.003951 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 36 | 36 | AY.33 | 0.002404 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 34 | 34 | B.1.438.1 | 0.003647 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 33 | 33 | B.1.1.7 | 0.00003 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 31 | 31 | All | 0.000006 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 30 | 30 | AY.103 | 0.000186 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 30 | 30 | B.1.429 | 0.000706 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 28 | 28 | B.1.1.426 | 1 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 28 | 28 | B.1.258 | 0.001863 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 24 | 24 | All | 0.000005 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 23 | 24 | AY.42 | 0.000925 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 1 | 24 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 24 | 24 | B.1.1 | 0.000435 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 24 | 24 | B.1.243 | 0.00167 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 23 | 23 | C.37 | 0.002669 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 21 | 22 | B.1.351 | 0.000624 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 1 | 22 | B.1.351 | 0.00003 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 21 | 21 | AY.98 | 0.001659 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 20 | 20 | C.30 | 0.034542 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 20 | 20 | P.1.7 | 0.006386 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 19 | 19 | AY.106 | 0.006363 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 19 | 19 | AY.20 | 0.000738 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 19 | 19 | AY.74 | 0.002197 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 18 | 18 | AY.16 | 0.006834 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 17 | 17 | AY.108 | 0.018743 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 17 | 17 | B.1.400 | 0.007293 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 16 | 16 | AY.4 | 0.000025 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 16 | 16 | AY.47 | 0.000498 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 16 | 16 | B.1.240.1 | 0.4 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 15 | 15 | AY.46.6 | 0.001083 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 15 | 15 | AY.5 | 0.00031 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 14 | 14 | AY.26 | 0.000396 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 14 | 14 | AY.99.2 | 0.00129 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 14 | 14 | B.1.617.2 | 0.000053 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 13 | 13 | B.1.1.7 | 0.000012 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 12 | 12 | B.1.1.519 | 0.000477 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 11 | 12 | B.1.160 | 0.000343 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 1 | 12 | B.1.160 | 0.000031 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 11 | 11 | AY.115 | 0.057292 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 8 | 11 | AY.119 | 0.000282 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 3 | 11 | AY.119 | 0.000106 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 11 | 11 | AY.75.1 | 0.001983 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 10 | 10 | B.1.1.63 | 0.003858 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 9 | 9 | AY.39.1 | 0.000357 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 9 | 9 | AY.75 | 0.000504 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 9 | 9 | B.1.36.29 | 0.004656 |
ORF1ab/nsp13 | 34 | V34S | GTc | TCc | 8 | 8 | All | 0.000002 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 8 | 8 | AY.120 | 0.000297 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 8 | 8 | AY.20 | 0.000311 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 8 | AY.4.5 | 0.000752 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 1 | 8 | AY.4.5 | 0.000107 |
ORF1ab/nsp13 | 34 | V34S | GTc | TCc | 8 | 8 | B.1.160.27 | 0.121212 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 6 | 7 | All | 0.000001 |
ORF1ab/nsp13 | 34 | V34D | gTc | gAc | 5 | 7 | All | 0.000001 |
ORF1ab/nsp13 | 34 | V34D | gTC | gAT | 2 | 7 | All | 0 |
ORF1ab/nsp13 | 34 | V34L | GtC | CtT | 1 | 7 | All | 0 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | AY.46 | 0.000729 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | B.1.1.412 | 0.053435 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | B.1.177.57 | 0.001967 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | B.1.240 | 0.001509 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 7 | 7 | B.1.621 | 0.00062 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 6 | 6 | AY.43 | 0.000027 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 6 | AY.9 | 0.000338 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 1 | 6 | AY.9 | 0.000068 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | B.1.1.222 | 0.001224 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 6 | 6 | B.1.1.284 | 0.000644 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | B.1.179 | 0.022556 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | AY.4.2 | 0.000108 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | AY.62 | 0.002179 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | B.1.36.31 | 0.008757 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | B.1.415 | 0.071429 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 5 | 5 | R.1 | 0.00045 |
ORF1ab/nsp13 | 34 | V34Y | GTc | TAc | 2 | 4 | 0.111111 | |
ORF1ab/nsp13 | 34 | V34Y | GTC | TAT | 2 | 4 | 0.111111 | |
ORF1ab/nsp13 | 34 | V34D | gTc | gAc | 2 | 4 | 0.111111 | |
ORF1ab/nsp13 | 34 | V34D | gTC | gAT | 2 | 4 | 0.111111 | |
ORF1ab/nsp13 | 34 | V34Y | GTC | TAT | 2 | 4 | All | 0 |
ORF1ab/nsp13 | 34 | V34Y | GTc | TAc | 2 | 4 | All | 0 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.116 | 0.001147 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.79 | 0.004843 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | AY.9.1 | 0.000335 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtG | 3 | 4 | B.1.177.7 | 0.000495 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 4 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | B.1.306 | 0.022857 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | B.1.575 | 0.001214 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 4 | 4 | B.1.621.1 | 0.002023 |
ORF1ab/nsp13 | 34 | V34del1 | Gtc | -tc | 2 | 3 | All | 0 |
ORF1ab/nsp13 | 34 | V34del1 | gtC | gt- | 1 | 3 | All | 0 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | AY.91 | 0.002191 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.1.432 | 0.003797 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.177.12 | 0.000455 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.177.44 | 0.001557 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.36.39 | 0.006652 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.396 | 0.002117 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 3 | B.1.617.1 | 0.000258 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 1 | 3 | B.1.617.1 | 0.000129 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | B.1.619.1 | 0.001924 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | N.3 | 0.017442 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 3 | 3 | Q.4 | 0.001364 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | A.27 | 0.003311 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.22 | 0.004184 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.1.166 | 0.066667 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.1.526 | 0.007092 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.104 | 0.00738 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.177.19 | 0.002861 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.177.32 | 0.002699 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.177.5 | 0.002484 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.462 | 0.014493 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.604 | 0.034483 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | B.1.620 | 0.001892 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 2 | B.6.6 | 0.000889 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 1 | 2 | B.6.6 | 0.000889 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | C.38 | 0.016129 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | P.4 | 0.007605 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | 0.055556 | |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp13 | 34 | V34N | GTC | AAT | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 34 | V34M | GtC | AtG | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 34 | V34del2 | GTc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 34 | V34T | GTC | ACA | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp13 | 34 | V34I | GtC | AtA | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp13 | 34 | V34del2 | GTc | --c | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 34 | V34N | GTC | AAT | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 34 | V34D | gTc | gAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 34 | V34L | GtC | CtT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 34 | V34D | gTc | gAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.118 | 0.010204 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.368 | 0.003086 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.371 | 0.010417 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.380 | 0.009804 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.40 | 0.034483 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.417 | 0.002703 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp13 | 34 | V34D | gTc | gAc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.134 | 0.005464 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.160.23 | 0.004831 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.169 | 0.014925 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtA | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.177.72 | 0.00339 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 34 | V34del1 | Gtc | -tc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.258.5 | 0.008772 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp13 | 34 | V34L | Gtc | Ctc | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp13 | 34 | V34T | GTC | ACA | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp13 | 34 | V34A | gTc | gCc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp13 | 34 | V34M | GtC | AtG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 34 | V34del1 | gtC | gt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | B.56 | 0.028571 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp13 | 34 | V34del1 | Gtc | -tc | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp13 | 34 | V34F | Gtc | Ttc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp13 | 34 | V34V | gtC | gtT | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp13 | 34 | V34del | GTC | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp13 | 34 | V34I | Gtc | Atc | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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