CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 31 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1331Y31HY5355HnonsynTacCac66640.96969716327-16329

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1331Y31HTacCac6466All0.000012
ORF1ab/nsp1331Y31HTacCac2121AY.430.000093
ORF1ab/nsp1331Y31HTacCac1111B.1.1.70.00001
ORF1ab/nsp1331Y31HTacCac1010AY.98.10.000484
ORF1ab/nsp1331Y31HTacCac44AY.1030.000025
ORF1ab/nsp1331Y31HTacCac33B.1.617.20.000011
ORF1ab/nsp1331Y31HTacCac22AY.1180.000125
ORF1ab/nsp1331Y31HTacCac11AY.1010.00049
ORF1ab/nsp1331Y31HTacCac11AY.250.000006
ORF1ab/nsp1331Y31HTacCac11AY.440.000006
ORF1ab/nsp1331Y31HTacCac11AY.50.000021
ORF1ab/nsp1331Y31HTacCac11B.10.000009
ORF1ab/nsp1331Y31HTacCac11B.1.10.000018
ORF1ab/nsp1331Y31HTacCac11B.1.1.10.000327
ORF1ab/nsp1331Y31HTacCac11B.1.1.2190.005
ORF1ab/nsp1331Y31HTacCac11B.1.177.570.000281
ORF1ab/nsp1331Y31HTacCac11B.1.20.000009
ORF1ab/nsp1331Y31HTacCac11B.1.2140.003663
ORF1ab/nsp1331Y31HTacCac11B.1.621.10.000506
ORF1ab/nsp1331Y31HTacCac11D.20.000075