CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 302 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13302A302SA5626SnonsynGctTct6796480.95434517140-17142

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13302A302SGctTct648679All0.000124
ORF1ab/nsp13302A302SGctTct134134B.1.1.2940.16962
ORF1ab/nsp13302A302SGctTct9090AY.250.000541
ORF1ab/nsp13302A302SGctTct4270B.1.1.70.000038
ORF1ab/nsp13302A302SGctTct4343AY.40.000067
ORF1ab/nsp13302A302SGctTct3737B.10.000339
ORF1ab/nsp13302A302SGctTct3232B.1.10.000581
ORF1ab/nsp13302A302SGctTct2424B.1.617.20.00009
ORF1ab/nsp13302A302SGctTct2222AY.46.60.001589
ORF1ab/nsp13302A302SGctTct1616AY.1030.000099
ORF1ab/nsp13302A302SGctTct1515AY.430.000066
ORF1ab/nsp13302A302SGctTct1415B.1.20.000123
ORF1ab/nsp13302A302SGctTct1212AY.1190.000424
ORF1ab/nsp13302A302SGctTct99B.1.1770.000119
ORF1ab/nsp13302A302SGctTct99B.1.2210.000639
ORF1ab/nsp13302A302SGctTct99C.30.10.060403
ORF1ab/nsp13302A302SGctTct99P.1.150.002091
ORF1ab/nsp13302A302SGctTct77B.1.2350.017632
ORF1ab/nsp13302A302SGctTct55B.1.1.1740.016892
ORF1ab/nsp13302A302SGctTct55B.1.1.3060.002192
ORF1ab/nsp13302A302SGctTct55B.1.1.540.015106
ORF1ab/nsp13302A302SGctTct55B.1.5260.000118
ORF1ab/nsp13302A302SGctTct44AY.1020.000106
ORF1ab/nsp13302A302SGctTct44AY.290.000063
ORF1ab/nsp13302A302SGctTct44AY.330.000267
ORF1ab/nsp13302A302SGctTct44AY.440.000024
ORF1ab/nsp13302A302SGctTct44AY.470.000124
ORF1ab/nsp13302A302SGctTct44B.1.1.280.001245
ORF1ab/nsp13302A302SGctTct44B.1.5090.003463
ORF1ab/nsp13302A302SGctTct44B.1.6370.000292
ORF1ab/nsp13302A302SGctTct44D.20.0003
ORF1ab/nsp13302A302SGctTct33AY.200.000117
ORF1ab/nsp13302A302SGctTct33AY.260.000085
ORF1ab/nsp13302A302SGctTct33AY.30.00003
ORF1ab/nsp13302A302SGctTct33AY.780.004622
ORF1ab/nsp13302A302SGctTct33B.1.4290.000071
ORF1ab/nsp13302A302SGctTct23P.10.000032
ORF1ab/nsp13302A302SGctTct12A0.000387
ORF1ab/nsp13302A302SGctTct22AY.300.000791
ORF1ab/nsp13302A302SGctTct22AY.34.10.00102
ORF1ab/nsp13302A302SGctTct22AY.390.000049
ORF1ab/nsp13302A302SGctTct22AY.610.00021
ORF1ab/nsp13302A302SGctTct22AY.690.000373
ORF1ab/nsp13302A302SGctTct22B.1.2340.000264
ORF1ab/nsp13302A302SGctTct22B.1.617.30.00597
ORF1ab/nsp13302A302SGctTct11A.120.166667
ORF1ab/nsp13302A302SGctTct11A.2.5.20.001572
ORF1ab/nsp13302A302SGctTct11AD.20.000219
ORF1ab/nsp13302A302SGctTct11AY.1000.000046
ORF1ab/nsp13302A302SGctTct11AY.1160.000287
ORF1ab/nsp13302A302SGctTct11AY.410.000294
ORF1ab/nsp13302A302SGctTct11AY.420.00004
ORF1ab/nsp13302A302SGctTct11AY.450.000122
ORF1ab/nsp13302A302SGctTct11AY.490.003195
ORF1ab/nsp13302A302SGctTct11AY.5.30.000337
ORF1ab/nsp13302A302SGctTct11AY.520.000814
ORF1ab/nsp13302A302SGctTct11AY.540.000095
ORF1ab/nsp13302A302SGctTct11AY.7.10.000113
ORF1ab/nsp13302A302SGctTct11AY.740.000116
ORF1ab/nsp13302A302SGctTct11AY.750.000056
ORF1ab/nsp13302A302SGctTct11AY.830.001724
ORF1ab/nsp13302A302SGctTct11AY.880.000884
ORF1ab/nsp13302A302SGctTct11AY.990.001049
ORF1ab/nsp13302A302SGctTct11B.1.1.330.000421
ORF1ab/nsp13302A302SGctTct11B.1.1.370.000193
ORF1ab/nsp13302A302SGctTct11B.1.1.5190.00004
ORF1ab/nsp13302A302SGctTct11B.1.1600.000031
ORF1ab/nsp13302A302SGctTct11B.1.2410.000812
ORF1ab/nsp13302A302SGctTct11B.1.3510.00003
ORF1ab/nsp13302A302SGctTct11B.1.36.240.006173
ORF1ab/nsp13302A302SGctTct11B.1.3620.001541
ORF1ab/nsp13302A302SGctTct11B.1.3690.000285
ORF1ab/nsp13302A302SGctTct11B.1.4270.00005
ORF1ab/nsp13302A302SGctTct11B.1.517.10.005263
ORF1ab/nsp13302A302SGctTct11B.1.5820.000491
ORF1ab/nsp13302A302SGctTct11B.1.5950.000261
ORF1ab/nsp13302A302SGctTct11B.1.6090.000479
ORF1ab/nsp13302A302SGctTct11B.1.700.02439
ORF1ab/nsp13302A302SGctTct11B.4.80.071429
ORF1ab/nsp13302A302SGctTct11C.10.002392
ORF1ab/nsp13302A302SGctTct11N.90.005952