CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 301 & Codon = tcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301SS5625SsyntcTtcC23642660.11252117137-17139

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301StcTtcC2662364All0.000051
ORF1ab/nsp13301S301StcTtcC531848B.1.1.70.000047
ORF1ab/nsp13301S301StcTtcC3179AY.40.000048
ORF1ab/nsp13301S301StcTtcC1735B.1.617.20.000064
ORF1ab/nsp13301S301StcTtcC2727B.1.1.500.01833
ORF1ab/nsp13301S301StcTtcC2323AY.680.006296
ORF1ab/nsp13301S301StcTtcC318AY.390.000074
ORF1ab/nsp13301S301StcTtcC1515B.1.1.3480.011943
ORF1ab/nsp13301S301StcTtcC415R.10.00036
ORF1ab/nsp13301S301StcTtcC812AY.430.000035
ORF1ab/nsp13301S301StcTtcC710AY.1020.000186
ORF1ab/nsp13301S301StcTtcC610AY.260.00017
ORF1ab/nsp13301S301StcTtcC110B.10.000009
ORF1ab/nsp13301S301StcTtcC58AY.30.00005
ORF1ab/nsp13301S301StcTtcC67B.1.10.000109
ORF1ab/nsp13301S301StcTtcC47P.10.000063
ORF1ab/nsp13301S301StcTtcC67P.1.140.000287
ORF1ab/nsp13301S301StcTtcC46B.1.20.000035
ORF1ab/nsp13301S301StcTtcC16B.1.4290.000024
ORF1ab/nsp13301S301StcTtcC15B.1.1770.000013
ORF1ab/nsp13301S301StcTtcC34B.1.5260.000071
ORF1ab/nsp13301S301StcTtcC23AY.440.000012
ORF1ab/nsp13301S301StcTtcC23AY.980.000158
ORF1ab/nsp13301S301StcTtcC33B.1.221.30.0025
ORF1ab/nsp13301S301StcTtcC33C.360.002732
ORF1ab/nsp13301S301StcTtcC12AY.250.000006
ORF1ab/nsp13301S301StcTtcC22AY.4.20.000043
ORF1ab/nsp13301S301StcTtcC22AY.5.40.000553
ORF1ab/nsp13301S301StcTtcC12AY.540.000095
ORF1ab/nsp13301S301StcTtcC22AY.750.000112
ORF1ab/nsp13301S301StcTtcC22B.1.5950.000522
ORF1ab/nsp13301S301StcTtcC11AY.1030.000006
ORF1ab/nsp13301S301StcTtcC11AY.1170.000085
ORF1ab/nsp13301S301StcTtcC11AY.1180.000063
ORF1ab/nsp13301S301StcTtcC11AY.1190.000035
ORF1ab/nsp13301S301StcTtcC11AY.1200.000037
ORF1ab/nsp13301S301StcTtcC11AY.230.00007
ORF1ab/nsp13301S301StcTtcC11AY.340.000097
ORF1ab/nsp13301S301StcTtcC11AY.400.000964
ORF1ab/nsp13301S301StcTtcC11AY.50.000021
ORF1ab/nsp13301S301StcTtcC11AY.60.000041
ORF1ab/nsp13301S301StcTtcC11AY.690.000187
ORF1ab/nsp13301S301StcTtcC11AY.920.000287
ORF1ab/nsp13301S301StcTtcC11B.1.1.1890.001513
ORF1ab/nsp13301S301StcTtcC11B.1.177.210.000076
ORF1ab/nsp13301S301StcTtcC11B.1.177.50.001242
ORF1ab/nsp13301S301StcTtcC11B.1.177.540.000606
ORF1ab/nsp13301S301StcTtcC11B.1.2230.002778
ORF1ab/nsp13301S301StcTtcC11B.1.258.50.008772
ORF1ab/nsp13301S301StcTtcC11B.1.3110.000275
ORF1ab/nsp13301S301StcTtcC11B.1.6370.000073
ORF1ab/nsp13301S301StcTtcC11P.1.20.001156