CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 301 & Codon = tcA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301SS5625SsyntcTtcA236420630.87267317137-17139

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301StcTtcA20632364All0.000395
ORF1ab/nsp13301S301StcTtcA17741848B.1.1.70.001588
ORF1ab/nsp13301S301StcTtcA4879AY.40.000075
ORF1ab/nsp13301S301StcTtcA5353AU.30.111814
ORF1ab/nsp13301S301StcTtcA4242AY.140.003697
ORF1ab/nsp13301S301StcTtcA1535B.1.617.20.000056
ORF1ab/nsp13301S301StcTtcA1518AY.390.000371
ORF1ab/nsp13301S301StcTtcA1115R.10.00099
ORF1ab/nsp13301S301StcTtcA1414B.4.81
ORF1ab/nsp13301S301StcTtcA412AY.430.000018
ORF1ab/nsp13301S301StcTtcA110AY.1020.000027
ORF1ab/nsp13301S301StcTtcA410AY.260.000113
ORF1ab/nsp13301S301StcTtcA910B.10.000082
ORF1ab/nsp13301S301StcTtcA18AY.30.00001
ORF1ab/nsp13301S301StcTtcA17B.1.10.000018
ORF1ab/nsp13301S301StcTtcA77B.1.1.2630.010903
ORF1ab/nsp13301S301StcTtcA37P.10.000047
ORF1ab/nsp13301S301StcTtcA17P.1.140.000048
ORF1ab/nsp13301S301StcTtcA26B.1.20.000018
ORF1ab/nsp13301S301StcTtcA45B.1.1770.000053
ORF1ab/nsp13301S301StcTtcA44AY.39.10.000158
ORF1ab/nsp13301S301StcTtcA14B.1.5260.000024
ORF1ab/nsp13301S301StcTtcA33AY.1000.000138
ORF1ab/nsp13301S301StcTtcA33AY.420.000121
ORF1ab/nsp13301S301StcTtcA13AY.440.000006
ORF1ab/nsp13301S301StcTtcA13AY.980.000079
ORF1ab/nsp13301S301StcTtcA33B0.000383
ORF1ab/nsp13301S301StcTtcA33B.1.1.5190.000119
ORF1ab/nsp13301S301StcTtcA33B.1.6280.001057
ORF1ab/nsp13301S301StcTtcA12AY.250.000006
ORF1ab/nsp13301S301StcTtcA12AY.540.000095
ORF1ab/nsp13301S301StcTtcA22B.1.4710.005464
ORF1ab/nsp13301S301StcTtcA22B.1.5960.000174
ORF1ab/nsp13301S301StcTtcA22Q.20.001227
ORF1ab/nsp13301S301StcTtcA11A0.000387
ORF1ab/nsp13301S301StcTtcA11A.2.50.000499
ORF1ab/nsp13301S301StcTtcA11AY.200.000039
ORF1ab/nsp13301S301StcTtcA11AY.290.000016
ORF1ab/nsp13301S301StcTtcA11AY.330.000067
ORF1ab/nsp13301S301StcTtcA11AY.840.000437
ORF1ab/nsp13301S301StcTtcA11AY.870.000833
ORF1ab/nsp13301S301StcTtcA11B.1.1.2980.000862
ORF1ab/nsp13301S301StcTtcA11B.1.1570.002985
ORF1ab/nsp13301S301StcTtcA11B.1.177.40.000211
ORF1ab/nsp13301S301StcTtcA11B.1.2150.009615
ORF1ab/nsp13301S301StcTtcA11B.1.2580.000067
ORF1ab/nsp13301S301StcTtcA11B.1.3400.004292
ORF1ab/nsp13301S301StcTtcA11B.1.3510.00003
ORF1ab/nsp13301S301StcTtcA11B.1.3610.001289
ORF1ab/nsp13301S301StcTtcA11B.1.3980.002976
ORF1ab/nsp13301S301StcTtcA11B.1.5200.021739
ORF1ab/nsp13301S301StcTtcA11B.1.5870.001898
ORF1ab/nsp13301S301StcTtcA11B.1.617.10.000129
ORF1ab/nsp13301S301StcTtcA11B.40.002208
ORF1ab/nsp13301S301StcTtcA11B.4.70.010101
ORF1ab/nsp13301S301StcTtcA11B.580.010204
ORF1ab/nsp13301S301StcTtcA11Q.10.000126
ORF1ab/nsp13301S301StcTtcA11Q.80.000165