CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 301 & Codon = tTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301FS5625FnonsyntCttTt4654580.98494617137-17139

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301FtCttTt458465All0.000088
ORF1ab/nsp13301S301FtCttTt279286B.1.1.70.00025
ORF1ab/nsp13301S301FtCttTt2626B.1.3490.018585
ORF1ab/nsp13301S301FtCttTt2222B.1.1770.00029
ORF1ab/nsp13301S301FtCttTt1818B.1.20.000158
ORF1ab/nsp13301S301FtCttTt1010C.30.10.067114
ORF1ab/nsp13301S301FtCttTt99B.1.1.1890.013616
ORF1ab/nsp13301S301FtCttTt77B.10.000064
ORF1ab/nsp13301S301FtCttTt77B.1.4290.000165
ORF1ab/nsp13301S301FtCttTt77B.1.5260.000165
ORF1ab/nsp13301S301FtCttTt55B.1.617.10.000645
ORF1ab/nsp13301S301FtCttTt33AY.90.000203
ORF1ab/nsp13301S301FtCttTt33B.1.177.860.00055
ORF1ab/nsp13301S301FtCttTt33B.1.2580.0002
ORF1ab/nsp13301S301FtCttTt33P.10.000047
ORF1ab/nsp13301S301FtCttTt33Q.30.000435
ORF1ab/nsp13301S301FtCttTt22AY.1030.000012
ORF1ab/nsp13301S301FtCttTt22AY.1190.000071
ORF1ab/nsp13301S301FtCttTt22AY.390.000049
ORF1ab/nsp13301S301FtCttTt22B.1.10.000036
ORF1ab/nsp13301S301FtCttTt22B.1.1.10.000653
ORF1ab/nsp13301S301FtCttTt22B.1.1.2220.000408
ORF1ab/nsp13301S301FtCttTt22B.1.177.540.001213
ORF1ab/nsp13301S301FtCttTt22B.1.2210.000142
ORF1ab/nsp13301S301FtCttTt22B.1.4270.000101
ORF1ab/nsp13301S301FtCttTt22B.1.617.20.000008
ORF1ab/nsp13301S301FtCttTt22B.1.6200.001892
ORF1ab/nsp13301S301FtCttTt22D.20.00015
ORF1ab/nsp13301S301FtCttTt11AU.20.002421
ORF1ab/nsp13301S301FtCttTt11AY.270.000065
ORF1ab/nsp13301S301FtCttTt11AY.30.00001
ORF1ab/nsp13301S301FtCttTt11AY.40.000002
ORF1ab/nsp13301S301FtCttTt11AY.750.000056
ORF1ab/nsp13301S301FtCttTt11AY.990.001049
ORF1ab/nsp13301S301FtCttTt11B.1.1.2140.000055
ORF1ab/nsp13301S301FtCttTt11B.1.1.2730.006757
ORF1ab/nsp13301S301FtCttTt11B.1.1.280.000311
ORF1ab/nsp13301S301FtCttTt11B.1.1.3060.000438
ORF1ab/nsp13301S301FtCttTt11B.1.1.3110.000358
ORF1ab/nsp13301S301FtCttTt11B.1.1.3170.000412
ORF1ab/nsp13301S301FtCttTt11B.1.1.3700.012658
ORF1ab/nsp13301S301FtCttTt11B.1.1.4150.05
ORF1ab/nsp13301S301FtCttTt11B.1.1.5190.00004
ORF1ab/nsp13301S301FtCttTt11B.1.1600.000031
ORF1ab/nsp13301S301FtCttTt11B.1.177.50.001242
ORF1ab/nsp13301S301FtCttTt11B.1.2410.000812
ORF1ab/nsp13301S301FtCttTt11B.1.2430.00007
ORF1ab/nsp13301S301FtCttTt11B.1.2650.001271
ORF1ab/nsp13301S301FtCttTt11B.1.3510.00003
ORF1ab/nsp13301S301FtCttTt11B.1.438.10.000107
ORF1ab/nsp13301S301FtCttTt11B.1.4520.013699
ORF1ab/nsp13301S301FtCttTt11B.1.466.20.000391
ORF1ab/nsp13301S301FtCttTt11B.1.5750.000303
ORF1ab/nsp13301S301FtCttTt11B.1.6320.006711
ORF1ab/nsp13301S301FtCttTt11B.1.930.000934
ORF1ab/nsp13301S301FtCttTt11B.400.000364
ORF1ab/nsp13301S301FtCttTt11Q.10.000126