CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 292 | A292S | A5616S | nonsyn | Gct | Tct | 1357 | 1357 | 1 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292A | A5616A | syn | gcT | gcC | 191 | 146 | 0.764398 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292A | A5616A | syn | gcT | gcA | 191 | 36 | 0.188482 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292A | A5616A | syn | gcT | gcG | 191 | 9 | 0.0471204 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292V | A5616V | nonsyn | gCt | gTt | 60 | 60 | 1 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292T | A5616T | nonsyn | Gct | Act | 31 | 30 | 0.967742 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292T | A5616T | nonsyn | GcT | AcA | 31 | 1 | 0.0322581 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292del | A5616del | del | GCT | --- | 17 | 17 | 1 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292del1 | A5616del1 | del | Gct | -ct | 9 | 8 | 0.888889 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292del1 | A5616del1 | del | gcT | gc- | 9 | 1 | 0.111111 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292G | A5616G | nonsyn | gCt | gGt | 8 | 7 | 0.875 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292G | A5616G | nonsyn | gCT | gGG | 8 | 1 | 0.125 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292P | A5616P | nonsyn | Gct | Cct | 4 | 2 | 0.5 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292P | A5616P | nonsyn | GcT | CcG | 4 | 1 | 0.25 | 17110-17112 |
ORF1ab/nsp13 | 292 | A292P | A5616P | nonsyn | GcT | CcA | 4 | 1 | 0.25 | 17110-17112 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1357 | 1357 | All | 0.00026 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1033 | 1033 | B.1.620 | 0.977294 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 146 | 191 | All | 0.000028 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 36 | 191 | All | 0.000007 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcG | 9 | 191 | All | 0.000002 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 95 | 95 | B.1 | 0.00087 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 60 | 60 | All | 0.000011 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 36 | 44 | B.1.1.7 | 0.000032 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcG | 6 | 44 | B.1.1.7 | 0.000005 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 2 | 44 | B.1.1.7 | 0.000002 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 43 | 43 | AY.3 | 0.000428 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 40 | 40 | B.1.160 | 0.001248 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 39 | 39 | B.1.1.7 | 0.000035 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 28 | 39 | B.1.177 | 0.000369 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 11 | 39 | B.1.177 | 0.000145 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 30 | 31 | All | 0.000006 |
ORF1ab/nsp13 | 292 | A292T | GcT | AcA | 1 | 31 | All | 0 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 17 | 17 | All | 0.000003 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 17 | 17 | AY.29 | 0.000268 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 12 | 12 | AY.4 | 0.000019 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 10 | 10 | AY.4 | 0.000016 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 8 | 9 | All | 0.000002 |
ORF1ab/nsp13 | 292 | A292del1 | gcT | gc- | 1 | 9 | All | 0 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 9 | 9 | AY.103 | 0.000056 |
ORF1ab/nsp13 | 292 | A292G | gCt | gGt | 7 | 8 | All | 0.000001 |
ORF1ab/nsp13 | 292 | A292G | gCT | gGG | 1 | 8 | All | 0 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 8 | 8 | AY.69 | 0.001493 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 7 | 7 | B.1.177.60 | 0.001529 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 6 | 6 | AY.103 | 0.000037 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 5 | 6 | AY.43 | 0.000022 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcG | 1 | 6 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 6 | 6 | AY.67 | 0.002786 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 4 | 5 | AY.29 | 0.000063 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 5 | AY.29 | 0.000016 |
ORF1ab/nsp13 | 292 | A292G | gCt | gGt | 5 | 5 | AY.38 | 0.002496 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 5 | 5 | AY.99.2 | 0.000461 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 5 | 5 | B.1.351 | 0.000149 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 5 | 5 | B.1.499 | 0.005252 |
ORF1ab/nsp13 | 292 | A292P | Gct | Cct | 2 | 4 | All | 0 |
ORF1ab/nsp13 | 292 | A292P | GcT | CcG | 1 | 4 | All | 0 |
ORF1ab/nsp13 | 292 | A292P | GcT | CcA | 1 | 4 | All | 0 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 4 | 4 | B.27 | 0.061538 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 2 | 3 | AY.4 | 0.000003 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 3 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 3 | 3 | B.6.6 | 0.002667 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B | 0.000256 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcG | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp13 | 292 | A292G | gCt | gGt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 292 | A292G | gCT | gGG | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | B.1.335 | 0.020619 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AK.1 | 0.012658 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp13 | 292 | A292T | GcT | AcA | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcG | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp13 | 292 | A292P | GcT | CcA | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp13 | 292 | A292P | GcT | CcG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 292 | A292P | Gct | Cct | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B | 0.000128 |
ORF1ab/nsp13 | 292 | A292P | Gct | Cct | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.1.412 | 0.007634 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp13 | 292 | A292G | gCt | gGt | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp13 | 292 | A292del1 | gcT | gc- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | B.1.258.5 | 0.008772 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.362.2 | 0.004717 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.40 | 0.019608 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.479 | 0.038462 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp13 | 292 | A292del1 | Gct | -ct | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp13 | 292 | A292S | Gct | Tct | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp13 | 292 | A292T | Gct | Act | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp13 | 292 | A292V | gCt | gTt | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcC | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp13 | 292 | A292del | GCT | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp13 | 292 | A292A | gcT | gcA | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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