CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 290

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13290H290YH5614YnonsynCatTat3536435364117104-17106
ORF1ab/nsp13290H290HH5614HsyncaTcaC183183117104-17106
ORF1ab/nsp13290H290RH5614RnonsyncAtcGt124124117104-17106
ORF1ab/nsp13290H290del1H5614del1delcaTca-58550.94827617104-17106
ORF1ab/nsp13290H290del1H5614del1delCAtT-t5820.034482817104-17106
ORF1ab/nsp13290H290del1H5614del1delcAtc-t5810.017241417104-17106
ORF1ab/nsp13290H290LH5614LnonsyncAtcTt32180.562517104-17106
ORF1ab/nsp13290H290LH5614LnonsyncATcTC32140.437517104-17106
ORF1ab/nsp13290H290delH5614deldelCAT---1616117104-17106
ORF1ab/nsp13290H290QH5614QnonsyncaTcaA15110.73333317104-17106
ORF1ab/nsp13290H290QH5614QnonsyncaTcaG1540.26666717104-17106
ORF1ab/nsp13290H290del2H5614del2delcATc--530.617104-17106
ORF1ab/nsp13290H290del2H5614del2delCAt--t520.417104-17106
ORF1ab/nsp13290H290NH5614NnonsynCatAat44117104-17106
ORF1ab/nsp13290H290DH5614DnonsynCatGat210.517104-17106
ORF1ab/nsp13290H290DH5614DnonsynCaTGaC210.517104-17106

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13290H290YCatTat3536435364All0.006764
ORF1ab/nsp13290H290YCatTat1479414794B.1.2580.984495
ORF1ab/nsp13290H290YCatTat96119611B.1.258.170.999272
ORF1ab/nsp13290H290YCatTat24912491B.1.258.110.987317
ORF1ab/nsp13290H290YCatTat10161016B.1.258.140.996078
ORF1ab/nsp13290H290YCatTat824824B.10.007547
ORF1ab/nsp13290H290YCatTat610610B.1.258.160.998363
ORF1ab/nsp13290H290YCatTat596596B.1.258.30.998325
ORF1ab/nsp13290H290YCatTat523523B.1.258.71
ORF1ab/nsp13290H290YCatTat373373B.1.258.220.994667
ORF1ab/nsp13290H290YCatTat354354B.1.1.70.000317
ORF1ab/nsp13290H290YCatTat301301B.1.20.00265
ORF1ab/nsp13290H290YCatTat290290B.1.258.41
ORF1ab/nsp13290H290YCatTat222222B.1.258.21
ORF1ab/nsp13290H290YCatTat200200B.1.258.91
ORF1ab/nsp13290H290HcaTcaC183183All0.000035
ORF1ab/nsp13290H290YCatTat183183B.1.5900.831818
ORF1ab/nsp13290H290YCatTat159159AY.40.000247
ORF1ab/nsp13290H290YCatTat140140B.1.258.190.992908
ORF1ab/nsp13290H290YCatTat128128B.1.258.210.992248
ORF1ab/nsp13290H290YCatTat127127B.1.258.121
ORF1ab/nsp13290H290RcAtcGt124124All0.000024
ORF1ab/nsp13290H290YCatTat114114B.1.258.51
ORF1ab/nsp13290H290YCatTat9393B.1.258.241
ORF1ab/nsp13290H290YCatTat9090B.1.10.001633
ORF1ab/nsp13290H290YCatTat8888B.1.258.101
ORF1ab/nsp13290H290YCatTat8484B.1.5260.001974
ORF1ab/nsp13290H290YCatTat7777AY.30.000766
ORF1ab/nsp13290H290YCatTat7676B.1.617.20.000286
ORF1ab/nsp13290H290YCatTat6868B.1.1770.000895
ORF1ab/nsp13290H290YCatTat6767AY.430.000297
ORF1ab/nsp13290H290YCatTat6363B.1.258.201
ORF1ab/nsp13290H290RcAtcGt5959B.10.00054
ORF1ab/nsp13290H290del1caTca-5558All0.000011
ORF1ab/nsp13290H290del1CAtT-t258All0
ORF1ab/nsp13290H290del1cAtc-t158All0
ORF1ab/nsp13290H290YCatTat5858B.1.2561
ORF1ab/nsp13290H290YCatTat5656B.1.6210.004957
ORF1ab/nsp13290H290YCatTat5353B.1.258.151
ORF1ab/nsp13290H290YCatTat5151B.1.258.61
ORF1ab/nsp13290H290YCatTat4545Q.20.027607
ORF1ab/nsp13290H290YCatTat4444AY.4.50.00473
ORF1ab/nsp13290H290YCatTat4242B.1.258.231
ORF1ab/nsp13290H290YCatTat3535B.1.1600.001092
ORF1ab/nsp13290H290YCatTat3434B.1.1.1760.014938
ORF1ab/nsp13290H290YCatTat3333AY.250.000198
ORF1ab/nsp13290H290YCatTat3333B0.004218
ORF1ab/nsp13290H290YCatTat3333B.1.3360.080488
ORF1ab/nsp13290H290YCatTat3333B.1.6090.01582
ORF1ab/nsp13290H290LcAtcTt1832All0.000003
ORF1ab/nsp13290H290LcATcTC1432All0.000003
ORF1ab/nsp13290H290YCatTat3131AY.130.00499
ORF1ab/nsp13290H290YCatTat3131B.1.438.10.003325
ORF1ab/nsp13290H290YCatTat2828B.1.2430.001948
ORF1ab/nsp13290H290YCatTat2828B.1.4270.001414
ORF1ab/nsp13290H290YCatTat2626B.1.2210.001847
ORF1ab/nsp13290H290YCatTat2626P.10.00041
ORF1ab/nsp13290H290YCatTat2525AY.470.000778
ORF1ab/nsp13290H290del1caTca-2525B.1.1.70.000022
ORF1ab/nsp13290H290YCatTat2525B.1.5960.002178
ORF1ab/nsp13290H290YCatTat2424G.11
ORF1ab/nsp13290H290HcaTcaC2222AY.430.000097
ORF1ab/nsp13290H290YCatTat2222B.1.3510.000654
ORF1ab/nsp13290H290HcaTcaC2222B.1.617.20.000083
ORF1ab/nsp13290H290YCatTat2121AY.1030.00013
ORF1ab/nsp13290H290YCatTat2121B.1.1.2840.002255
ORF1ab/nsp13290H290YCatTat2020AY.440.000122
ORF1ab/nsp13290H290YCatTat2020B.1.4290.000471
ORF1ab/nsp13290H290HcaTcaC1919AY.620.008279
ORF1ab/nsp13290H290YCatTat1919B.1.1.5190.000755
ORF1ab/nsp13290H290HcaTcaC1818AY.40.000028
ORF1ab/nsp13290H290HcaTcaC1717B.1.1.70.000015
ORF1ab/nsp13290H290delCAT---1616All0.000003
ORF1ab/nsp13290H290YCatTat1616B.1.910.033195
ORF1ab/nsp13290H290YCatTat1515A.10.004228
ORF1ab/nsp13290H290QcaTcaA1115All0.000002
ORF1ab/nsp13290H290QcaTcaG415All0.000001
ORF1ab/nsp13290H290YCatTat1515B.1.6370.001096
ORF1ab/nsp13290H290YCatTat1414A0.005418
ORF1ab/nsp13290H290del1caTca-1414B.1.1770.000184
ORF1ab/nsp13290H290YCatTat1313AY.1200.000483
ORF1ab/nsp13290H290YCatTat1313B.1.3670.010301
ORF1ab/nsp13290H290YCatTat1212B.1.1870.4
ORF1ab/nsp13290H290LcATcTC1111AY.420.000443
ORF1ab/nsp13290H290YCatTat1010AY.390.000247
ORF1ab/nsp13290H290YCatTat1010AY.4.20.000217
ORF1ab/nsp13290H290RcAtcGt1010B.1.1.70.000009
ORF1ab/nsp13290H290YCatTat1010B.1.258.181
ORF1ab/nsp13290H290YCatTat1010B.1.617.10.00129
ORF1ab/nsp13290H290YCatTat99AY.200.00035
ORF1ab/nsp13290H290YCatTat99AY.270.000582
ORF1ab/nsp13290H290YCatTat99AY.290.000142
ORF1ab/nsp13290H290YCatTat99B.1.1.2140.000499
ORF1ab/nsp13290H290YCatTat99B.1.177.450.003431
ORF1ab/nsp13290H290YCatTat99B.1.2340.001187
ORF1ab/nsp13290H290YCatTat99B.1.5750.002731
ORF1ab/nsp13290H290HcaTcaC88AY.1000.000368
ORF1ab/nsp13290H290YCatTat77AY.1180.000439
ORF1ab/nsp13290H290YCatTat77AY.260.000198
ORF1ab/nsp13290H290YCatTat77B.1.1.700.002387
ORF1ab/nsp13290H290RcAtcGt77B.1.177.730.003964
ORF1ab/nsp13290H290YCatTat77B.1.3750.005738
ORF1ab/nsp13290H290RcAtcGt77B.1.5250.000792
ORF1ab/nsp13290H290YCatTat77B.1.6000.040936
ORF1ab/nsp13290H290YCatTat77B.4.10.132075
ORF1ab/nsp13290H290RcAtcGt77B.550.020649
ORF1ab/nsp13290H290YCatTat66AY.1100.000676
ORF1ab/nsp13290H290YCatTat66AY.3.10.000512
ORF1ab/nsp13290H290YCatTat66AY.98.10.000291
ORF1ab/nsp13290H290YCatTat66B.1.1.2770.004552
ORF1ab/nsp13290H290YCatTat66B.1.1.280.001867
ORF1ab/nsp13290H290YCatTat66B.1.177.860.001101
ORF1ab/nsp13290H290HcaTcaC66B.1.20.000053
ORF1ab/nsp13290H290YCatTat66B.1.214.20.003597
ORF1ab/nsp13290H290YCatTat66B.1.362.20.028302
ORF1ab/nsp13290H290YCatTat66P.1.140.000287
ORF1ab/nsp13290H290del2cATc--35All0.000001
ORF1ab/nsp13290H290del2CAt--t25All0
ORF1ab/nsp13290H290RcAtcGt55AY.40.000008
ORF1ab/nsp13290H290YCatTat55AY.420.000201
ORF1ab/nsp13290H290HcaTcaC55AY.440.00003
ORF1ab/nsp13290H290YCatTat55AY.50.000103
ORF1ab/nsp13290H290YCatTat55AY.750.00028
ORF1ab/nsp13290H290YCatTat55AY.850.002136
ORF1ab/nsp13290H290YCatTat55AY.980.000395
ORF1ab/nsp13290H290YCatTat55B.1.1.3170.002058
ORF1ab/nsp13290H290YCatTat55B.1.1.500.003394
ORF1ab/nsp13290H290LcAtcTt55B.1.1.70.000004
ORF1ab/nsp13290H290RcAtcGt55B.1.1600.000156
ORF1ab/nsp13290H290YCatTat55B.1.2180.025773
ORF1ab/nsp13290H290YCatTat55B.1.2320.002687
ORF1ab/nsp13290H290YCatTat55B.1.4110.018519
ORF1ab/nsp13290H290NCatAat44All0.000001
ORF1ab/nsp13290H290YCatTat44AY.1020.000106
ORF1ab/nsp13290H290HcaTcaC44AY.1030.000025
ORF1ab/nsp13290H290RcAtcGt44AY.1190.000141
ORF1ab/nsp13290H290YCatTat44AY.230.000279
ORF1ab/nsp13290H290HcaTcaC44AY.250.000024
ORF1ab/nsp13290H290delCAT---44AY.250.000024
ORF1ab/nsp13290H290YCatTat44AY.340.000388
ORF1ab/nsp13290H290YCatTat44AY.4.2.10.000596
ORF1ab/nsp13290H290RcAtcGt44AY.440.000024
ORF1ab/nsp13290H290YCatTat44AY.99.20.000369
ORF1ab/nsp13290H290YCatTat44B.1.1.1160.25
ORF1ab/nsp13290H290YCatTat44B.1.1.2220.000816
ORF1ab/nsp13290H290YCatTat44B.1.1.3110.001433
ORF1ab/nsp13290H290YCatTat44B.1.1.390.002039
ORF1ab/nsp13290H290QcaTcaA34B.1.1.70.000003
ORF1ab/nsp13290H290QcaTcaG14B.1.1.70.000001
ORF1ab/nsp13290H290YCatTat44B.1.177.60.003906
ORF1ab/nsp13290H290YCatTat44B.1.177.730.002265
ORF1ab/nsp13290H290YCatTat44B.1.5250.000453
ORF1ab/nsp13290H290YCatTat33AY.1090.002219
ORF1ab/nsp13290H290HcaTcaC33AY.1190.000106
ORF1ab/nsp13290H290YCatTat33AY.1190.000106
ORF1ab/nsp13290H290YCatTat33AY.29.10.000662
ORF1ab/nsp13290H290LcAtcTt33AY.30.00003
ORF1ab/nsp13290H290YCatTat33AY.350.000699
ORF1ab/nsp13290H290YCatTat33AY.450.000365
ORF1ab/nsp13290H290YCatTat33AY.460.000312
ORF1ab/nsp13290H290YCatTat33AY.46.40.000494
ORF1ab/nsp13290H290YCatTat33AY.46.60.000217
ORF1ab/nsp13290H290YCatTat33AY.660.003209
ORF1ab/nsp13290H290YCatTat33AY.7.10.000338
ORF1ab/nsp13290H290delCAT---33B.10.000027
ORF1ab/nsp13290H290del1caTca-23B.10.000018
ORF1ab/nsp13290H290del1CAtT-t13B.10.000009
ORF1ab/nsp13290H290YCatTat33B.1.1.2160.002671
ORF1ab/nsp13290H290YCatTat33B.1.1.250.001706
ORF1ab/nsp13290H290YCatTat33B.1.1.5260.010638
ORF1ab/nsp13290H290YCatTat33B.1.177.180.00348
ORF1ab/nsp13290H290YCatTat33B.1.2220.005076
ORF1ab/nsp13290H290YCatTat33B.1.2600.010033
ORF1ab/nsp13290H290YCatTat33B.1.2930.0375
ORF1ab/nsp13290H290YCatTat33B.1.3800.019868
ORF1ab/nsp13290H290YCatTat33B.1.4000.001287
ORF1ab/nsp13290H290RcAtcGt33B.1.4160.003807
ORF1ab/nsp13290H290YCatTat33B.1.466.20.001174
ORF1ab/nsp13290H290YCatTat33B.1.4970.000944
ORF1ab/nsp13290H290HcaTcaC33B.1.5260.000071
ORF1ab/nsp13290H290YCatTat33B.1.5880.00273
ORF1ab/nsp13290H290HcaTcaC33B.1.5960.000261
ORF1ab/nsp13290H290del1caTca-33B.1.617.20.000011
ORF1ab/nsp13290H290YCatTat33C.160.003181
ORF1ab/nsp13290H290YCatTat33R.10.00027
ORF1ab/nsp13290H290DCatGat12All0
ORF1ab/nsp13290H290DCaTGaC12All0
ORF1ab/nsp13290H290YCatTat22AV.10.010101
ORF1ab/nsp13290H290YCatTat22AY.1000.000092
ORF1ab/nsp13290H290HcaTcaC22AY.1020.000053
ORF1ab/nsp13290H290YCatTat22AY.1060.00067
ORF1ab/nsp13290H290YCatTat22AY.1140.000462
ORF1ab/nsp13290H290YCatTat22AY.140.000176
ORF1ab/nsp13290H290HcaTcaC22AY.160.000759
ORF1ab/nsp13290H290YCatTat22AY.160.000759
ORF1ab/nsp13290H290LcAtcTt22AY.250.000012
ORF1ab/nsp13290H290del2CAt--t12AY.250.000006
ORF1ab/nsp13290H290del2cATc--12AY.250.000006
ORF1ab/nsp13290H290HcaTcaC22AY.30.00002
ORF1ab/nsp13290H290YCatTat22AY.39.1.10.001449
ORF1ab/nsp13290H290LcAtcTt22AY.40.000003
ORF1ab/nsp13290H290delCAT---22AY.430.000009
ORF1ab/nsp13290H290HcaTcaC22AY.470.000062
ORF1ab/nsp13290H290YCatTat22AY.530.000575
ORF1ab/nsp13290H290YCatTat22AY.60.000082
ORF1ab/nsp13290H290YCatTat22AY.610.00021
ORF1ab/nsp13290H290del1caTca-22AY.610.00021
ORF1ab/nsp13290H290YCatTat22AY.690.000373
ORF1ab/nsp13290H290YCatTat22AY.710.00095
ORF1ab/nsp13290H290YCatTat22AY.90.000135
ORF1ab/nsp13290H290LcATcTC22AY.9.20.000073
ORF1ab/nsp13290H290YCatTat22AZ.30.00304
ORF1ab/nsp13290H290LcAtcTt22B.10.000018
ORF1ab/nsp13290H290HcaTcaC22B.10.000018
ORF1ab/nsp13290H290QcaTcaA22B.1.10.000036
ORF1ab/nsp13290H290YCatTat22B.1.1.10.000653
ORF1ab/nsp13290H290YCatTat22B.1.1.1530.002191
ORF1ab/nsp13290H290YCatTat22B.1.1.1860.006873
ORF1ab/nsp13290H290HcaTcaC22B.1.1.280.000622
ORF1ab/nsp13290H290YCatTat22B.1.1.4480.004065
ORF1ab/nsp13290H290HcaTcaC22B.1.1.4610.024096
ORF1ab/nsp13290H290YCatTat22B.1.1.560.035714
ORF1ab/nsp13290H290delCAT---22B.1.1.70.000002
ORF1ab/nsp13290H290YCatTat22B.1.1.890.012121
ORF1ab/nsp13290H290YCatTat22B.1.1110.00235
ORF1ab/nsp13290H290YCatTat22B.1.1570.00597
ORF1ab/nsp13290H290YCatTat22B.1.160.140.004237
ORF1ab/nsp13290H290QcaTcaA12B.1.1770.000013
ORF1ab/nsp13290H290QcaTcaG12B.1.1770.000013
ORF1ab/nsp13290H290YCatTat22B.1.177.210.000153
ORF1ab/nsp13290H290YCatTat22B.1.177.320.002699
ORF1ab/nsp13290H290YCatTat22B.1.177.70.00033
ORF1ab/nsp13290H290YCatTat22B.1.177.810.000379
ORF1ab/nsp13290H290del1caTca-12B.1.20.000009
ORF1ab/nsp13290H290del1CAtT-t12B.1.20.000009
ORF1ab/nsp13290H290YCatTat22B.1.2100.004264
ORF1ab/nsp13290H290YCatTat22B.1.2370.00995
ORF1ab/nsp13290H290YCatTat22B.1.2400.000431
ORF1ab/nsp13290H290YCatTat22B.1.3110.000549
ORF1ab/nsp13290H290HcaTcaC22B.1.3510.000059
ORF1ab/nsp13290H290YCatTat22B.1.351.50.001199
ORF1ab/nsp13290H290YCatTat22B.1.360.000292
ORF1ab/nsp13290H290YCatTat22B.1.36.180.00084
ORF1ab/nsp13290H290YCatTat22B.1.36.220.002415
ORF1ab/nsp13290H290HcaTcaC22B.1.36.290.001035
ORF1ab/nsp13290H290YCatTat22B.1.3690.00057
ORF1ab/nsp13290H290YCatTat22B.1.4060.012121
ORF1ab/nsp13290H290QcaTcaA22B.1.4270.000101
ORF1ab/nsp13290H290HcaTcaC22B.1.4270.000101
ORF1ab/nsp13290H290YCatTat22B.1.4320.022472
ORF1ab/nsp13290H290YCatTat22B.1.4990.002101
ORF1ab/nsp13290H290YCatTat22B.1.6230.001073
ORF1ab/nsp13290H290YCatTat22B.1.6280.000705
ORF1ab/nsp13290H290YCatTat22B.610.011494
ORF1ab/nsp13290H290HcaTcaC22C.160.002121
ORF1ab/nsp13290H290YCatTat22C.36.30.001134
ORF1ab/nsp13290H290YCatTat22C.370.000232
ORF1ab/nsp13290H290YCatTat22D.20.00015
ORF1ab/nsp13290H290YCatTat22P.1.170.000324
ORF1ab/nsp13290H290YCatTat22Q.40.00091
ORF1ab/nsp13290H290HcaTcaC110.055556
ORF1ab/nsp13290H290YCatTat110.055556
ORF1ab/nsp13290H290RcAtcGt11A.10.000282
ORF1ab/nsp13290H290YCatTat11A.2.20.001689
ORF1ab/nsp13290H290YCatTat11A.2.50.000499
ORF1ab/nsp13290H290HcaTcaC11A.2.50.000499
ORF1ab/nsp13290H290YCatTat11A.2.5.10.004808
ORF1ab/nsp13290H290YCatTat11AD.20.000219
ORF1ab/nsp13290H290YCatTat11AE.60.038462
ORF1ab/nsp13290H290YCatTat11AU.10.001266
ORF1ab/nsp13290H290del1caTca-11AY.1020.000027
ORF1ab/nsp13290H290YCatTat11AY.1050.000643
ORF1ab/nsp13290H290del1caTca-11AY.1060.000335
ORF1ab/nsp13290H290YCatTat11AY.1130.000142
ORF1ab/nsp13290H290HcaTcaC11AY.1130.000142
ORF1ab/nsp13290H290YCatTat11AY.116.10.000311
ORF1ab/nsp13290H290YCatTat11AY.1170.000085
ORF1ab/nsp13290H290RcAtcGt11AY.1180.000063
ORF1ab/nsp13290H290HcaTcaC11AY.1180.000063
ORF1ab/nsp13290H290HcaTcaC11AY.1200.000037
ORF1ab/nsp13290H290YCatTat11AY.150.002222
ORF1ab/nsp13290H290YCatTat11AY.16.10.00047
ORF1ab/nsp13290H290NCatAat11AY.200.000039
ORF1ab/nsp13290H290HcaTcaC11AY.230.00007
ORF1ab/nsp13290H290RcAtcGt11AY.250.000006
ORF1ab/nsp13290H290RcAtcGt11AY.29.10.000221
ORF1ab/nsp13290H290RcAtcGt11AY.30.00001
ORF1ab/nsp13290H290HcaTcaC11AY.320.000532
ORF1ab/nsp13290H290YCatTat11AY.330.000067
ORF1ab/nsp13290H290HcaTcaC11AY.34.10.00051
ORF1ab/nsp13290H290HcaTcaC11AY.360.000148
ORF1ab/nsp13290H290DCaTGaC11AY.360.000148
ORF1ab/nsp13290H290YCatTat11AY.380.000499
ORF1ab/nsp13290H290HcaTcaC11AY.390.000025
ORF1ab/nsp13290H290LcAtcTt11AY.39.10.00004
ORF1ab/nsp13290H290del2cATc--11AY.40.000002
ORF1ab/nsp13290H290QcaTcaA11AY.40.000002
ORF1ab/nsp13290H290delCAT---11AY.40.000002
ORF1ab/nsp13290H290HcaTcaC11AY.4.20.000022
ORF1ab/nsp13290H290delCAT---11AY.420.00004
ORF1ab/nsp13290H290QcaTcaG11AY.430.000004
ORF1ab/nsp13290H290LcATcTC11AY.430.000004
ORF1ab/nsp13290H290QcaTcaA11AY.440.000006
ORF1ab/nsp13290H290del1caTca-11AY.440.000006
ORF1ab/nsp13290H290HcaTcaC11AY.450.000122
ORF1ab/nsp13290H290YCatTat11AY.46.30.000934
ORF1ab/nsp13290H290YCatTat11AY.480.000465
ORF1ab/nsp13290H290HcaTcaC11AY.50.000021
ORF1ab/nsp13290H290YCatTat11AY.5.40.000277
ORF1ab/nsp13290H290YCatTat11AY.520.000814
ORF1ab/nsp13290H290YCatTat11AY.540.000095
ORF1ab/nsp13290H290YCatTat11AY.570.000656
ORF1ab/nsp13290H290YCatTat11AY.650.000533
ORF1ab/nsp13290H290YCatTat11AY.680.000274
ORF1ab/nsp13290H290YCatTat11AY.70.000196
ORF1ab/nsp13290H290YCatTat11AY.7.20.000559
ORF1ab/nsp13290H290YCatTat11AY.730.000665
ORF1ab/nsp13290H290del1caTca-11AY.750.000056
ORF1ab/nsp13290H290del1caTca-11AY.75.10.00018
ORF1ab/nsp13290H290YCatTat11AY.840.000437
ORF1ab/nsp13290H290YCatTat11AY.880.000884
ORF1ab/nsp13290H290HcaTcaC11AY.9.10.000084
ORF1ab/nsp13290H290YCatTat11AY.9.10.000084
ORF1ab/nsp13290H290YCatTat11AY.9.20.000037
ORF1ab/nsp13290H290HcaTcaC11AY.98.10.000048
ORF1ab/nsp13290H290delCAT---11AY.990.001049
ORF1ab/nsp13290H290YCatTat11AY.99.10.001553
ORF1ab/nsp13290H290HcaTcaC11AY.99.20.000092
ORF1ab/nsp13290H290del1caTca-11AY.99.20.000092
ORF1ab/nsp13290H290del2CAt--t11B0.000128
ORF1ab/nsp13290H290del1caTca-11B0.000128
ORF1ab/nsp13290H290RcAtcGt11B.1.10.000018
ORF1ab/nsp13290H290LcAtcTt11B.1.10.000018
ORF1ab/nsp13290H290YCatTat11B.1.1.1480.008772
ORF1ab/nsp13290H290YCatTat11B.1.1.1610.003534
ORF1ab/nsp13290H290YCatTat11B.1.1.1700.001247
ORF1ab/nsp13290H290YCatTat11B.1.1.1710.003676
ORF1ab/nsp13290H290YCatTat11B.1.1.2050.003717
ORF1ab/nsp13290H290YCatTat11B.1.1.2070.001182
ORF1ab/nsp13290H290YCatTat11B.1.1.2340.012048
ORF1ab/nsp13290H290YCatTat11B.1.1.2410.00207
ORF1ab/nsp13290H290QcaTcaG11B.1.1.2440.015385
ORF1ab/nsp13290H290YCatTat11B.1.1.2580.003257
ORF1ab/nsp13290H290YCatTat11B.1.1.2620.015152
ORF1ab/nsp13290H290YCatTat11B.1.1.2630.001558
ORF1ab/nsp13290H290YCatTat11B.1.1.2800.003086
ORF1ab/nsp13290H290YCatTat11B.1.1.2910.000742
ORF1ab/nsp13290H290RcAtcGt11B.1.1.3030.002762
ORF1ab/nsp13290H290HcaTcaC11B.1.1.3160.000925
ORF1ab/nsp13290H290YCatTat11B.1.1.3180.000302
ORF1ab/nsp13290H290YCatTat11B.1.1.330.000421
ORF1ab/nsp13290H290HcaTcaC11B.1.1.340.013158
ORF1ab/nsp13290H290YCatTat11B.1.1.3680.003086
ORF1ab/nsp13290H290HcaTcaC11B.1.1.370.000193
ORF1ab/nsp13290H290YCatTat11B.1.1.370.000193
ORF1ab/nsp13290H290YCatTat11B.1.1.3970.002252
ORF1ab/nsp13290H290YCatTat11B.1.1.4090.002833
ORF1ab/nsp13290H290YCatTat11B.1.1.4130.006897
ORF1ab/nsp13290H290YCatTat11B.1.1.4160.000905
ORF1ab/nsp13290H290YCatTat11B.1.1.4340.000349
ORF1ab/nsp13290H290RcAtcGt11B.1.1.4480.002033
ORF1ab/nsp13290H290YCatTat11B.1.1.4670.019231
ORF1ab/nsp13290H290YCatTat11B.1.1.480.002874
ORF1ab/nsp13290H290HcaTcaC11B.1.1.5190.00004
ORF1ab/nsp13290H290NCatAat11B.1.1.5190.00004
ORF1ab/nsp13290H290YCatTat11B.1.1.5230.001563
ORF1ab/nsp13290H290YCatTat11B.1.1270.002198
ORF1ab/nsp13290H290YCatTat11B.1.1460.004237
ORF1ab/nsp13290H290YCatTat11B.1.160.70.002079
ORF1ab/nsp13290H290RcAtcGt11B.1.1770.000013
ORF1ab/nsp13290H290YCatTat11B.1.177.100.000878
ORF1ab/nsp13290H290YCatTat11B.1.177.120.000152
ORF1ab/nsp13290H290YCatTat11B.1.177.310.011494
ORF1ab/nsp13290H290YCatTat11B.1.177.40.000211
ORF1ab/nsp13290H290YCatTat11B.1.177.440.000519
ORF1ab/nsp13290H290YCatTat11B.1.177.570.000281
ORF1ab/nsp13290H290HcaTcaC11B.1.177.70.000165
ORF1ab/nsp13290H290del1caTca-11B.1.177.730.000566
ORF1ab/nsp13290H290YCatTat11B.1.177.750.001041
ORF1ab/nsp13290H290YCatTat11B.1.177.770.000726
ORF1ab/nsp13290H290HcaTcaC11B.1.177.810.000189
ORF1ab/nsp13290H290LcAtcTt11B.1.20.000009
ORF1ab/nsp13290H290HcaTcaC11B.1.2180.005155
ORF1ab/nsp13290H290RcAtcGt11B.1.2210.000071
ORF1ab/nsp13290H290YCatTat11B.1.221.20.004016
ORF1ab/nsp13290H290YCatTat11B.1.2390.001221
ORF1ab/nsp13290H290YCatTat11B.1.2420.018868
ORF1ab/nsp13290H290HcaTcaC11B.1.2430.00007
ORF1ab/nsp13290H290YCatTat11B.1.2470.014925
ORF1ab/nsp13290H290YCatTat11B.1.2480.029412
ORF1ab/nsp13290H290YCatTat11B.1.2740.011905
ORF1ab/nsp13290H290YCatTat11B.1.3010.005917
ORF1ab/nsp13290H290YCatTat11B.1.3060.005714
ORF1ab/nsp13290H290RcAtcGt11B.1.3110.000275
ORF1ab/nsp13290H290YCatTat11B.1.3130.006579
ORF1ab/nsp13290H290YCatTat11B.1.3230.020833
ORF1ab/nsp13290H290YCatTat11B.1.3260.007576
ORF1ab/nsp13290H290YCatTat11B.1.3290.000608
ORF1ab/nsp13290H290DCatGat11B.1.3510.00003
ORF1ab/nsp13290H290YCatTat11B.1.351.20.000303
ORF1ab/nsp13290H290YCatTat11B.1.351.30.000876
ORF1ab/nsp13290H290HcaTcaC11B.1.36.170.000494
ORF1ab/nsp13290H290YCatTat11B.1.36.210.00216
ORF1ab/nsp13290H290YCatTat11B.1.36.270.000763
ORF1ab/nsp13290H290YCatTat11B.1.36.280.005747
ORF1ab/nsp13290H290YCatTat11B.1.36.290.000517
ORF1ab/nsp13290H290YCatTat11B.1.36.70.004
ORF1ab/nsp13290H290YCatTat11B.1.3620.001541
ORF1ab/nsp13290H290YCatTat11B.1.3910.001127
ORF1ab/nsp13290H290YCatTat11B.1.4040.001302
ORF1ab/nsp13290H290YCatTat11B.1.4090.000781
ORF1ab/nsp13290H290YCatTat11B.1.4160.001269
ORF1ab/nsp13290H290YCatTat11B.1.4220.000812
ORF1ab/nsp13290H290YCatTat11B.1.4260.001009
ORF1ab/nsp13290H290delCAT---11B.1.4270.00005
ORF1ab/nsp13290H290RcAtcGt11B.1.438.10.000107
ORF1ab/nsp13290H290YCatTat11B.1.4730.019231
ORF1ab/nsp13290H290YCatTat11B.1.5090.000866
ORF1ab/nsp13290H290YCatTat11B.1.5610.000397
ORF1ab/nsp13290H290YCatTat11B.1.5640.000426
ORF1ab/nsp13290H290YCatTat11B.1.564.10.001577
ORF1ab/nsp13290H290HcaTcaC11B.1.5650.00081
ORF1ab/nsp13290H290HcaTcaC11B.1.5680.001111
ORF1ab/nsp13290H290YCatTat11B.1.5680.001111
ORF1ab/nsp13290H290YCatTat11B.1.5730.006098
ORF1ab/nsp13290H290YCatTat11B.1.5760.000907
ORF1ab/nsp13290H290YCatTat11B.1.5950.000261
ORF1ab/nsp13290H290YCatTat11B.1.596.10.009346
ORF1ab/nsp13290H290YCatTat11B.1.5990.00365
ORF1ab/nsp13290H290delCAT---11B.1.617.20.000004
ORF1ab/nsp13290H290NCatAat11B.1.617.20.000004
ORF1ab/nsp13290H290YCatTat11B.1.6190.000871
ORF1ab/nsp13290H290del1cAtc-t11B.1.6210.000089
ORF1ab/nsp13290H290NCatAat11B.1.6230.000536
ORF1ab/nsp13290H290YCatTat11B.1.6250.002353
ORF1ab/nsp13290H290YCatTat11B.1.6270.00202
ORF1ab/nsp13290H290YCatTat11B.1.6380.052632
ORF1ab/nsp13290H290YCatTat11B.1.690.035714
ORF1ab/nsp13290H290YCatTat11B.1.90.006173
ORF1ab/nsp13290H290YCatTat11B.1.940.027027
ORF1ab/nsp13290H290YCatTat11B.30.000831
ORF1ab/nsp13290H290RcAtcGt11B.4.10.018868
ORF1ab/nsp13290H290YCatTat11B.400.000364
ORF1ab/nsp13290H290YCatTat11C.1.20.004255
ORF1ab/nsp13290H290QcaTcaA11C.20.016129
ORF1ab/nsp13290H290YCatTat11C.300.001727
ORF1ab/nsp13290H290YCatTat11C.350.000774
ORF1ab/nsp13290H290YCatTat11C.360.000911
ORF1ab/nsp13290H290YCatTat11C.400.027778
ORF1ab/nsp13290H290YCatTat11C.80.004464
ORF1ab/nsp13290H290LcAtcTt11D.20.000075
ORF1ab/nsp13290H290YCatTat11P.1.160.000374
ORF1ab/nsp13290H290YCatTat11P.1.30.034483
ORF1ab/nsp13290H290YCatTat11Q.10.000126
ORF1ab/nsp13290H290del2cATc--11Q.20.000613
ORF1ab/nsp13290H290YCatTat11Q.30.000145
ORF1ab/nsp13290H290YCatTat11Q.80.000165