CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 268

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13268N268NN5592NsynaaTaaC322174322174117038-17040
ORF1ab/nsp13268N268SN5592SnonsynaAtaGt3973920.98740617038-17040
ORF1ab/nsp13268N268SN5592SnonsynaATaGC39750.012594517038-17040
ORF1ab/nsp13268N268HN5592HnonsynAatCat231231117038-17040
ORF1ab/nsp13268N268KN5592KnonsynaaTaaA1701140.67058817038-17040
ORF1ab/nsp13268N268KN5592KnonsynaaTaaG170560.32941217038-17040
ORF1ab/nsp13268N268DN5592DnonsynAaTGaC86710.82558117038-17040
ORF1ab/nsp13268N268DN5592DnonsynAatGat86150.17441917038-17040
ORF1ab/nsp13268N268TN5592TnonsynaAtaCt7575117038-17040
ORF1ab/nsp13268N268delN5592deldelAAT---1515117038-17040
ORF1ab/nsp13268N268IN5592InonsynaAtaTt1313117038-17040
ORF1ab/nsp13268N268del1N5592del1delAat-at530.617038-17040
ORF1ab/nsp13268N268del1N5592del1delaaTaa-520.417038-17040
ORF1ab/nsp13268N268CN5592CnonsynAAtTGt33117038-17040
ORF1ab/nsp13268N268LN5592LnonsynAAtCTt33117038-17040
ORF1ab/nsp13268N268YN5592YnonsynAatTat33117038-17040
ORF1ab/nsp13268N268del2N5592del2delAAt--t11117038-17040
ORF1ab/nsp13268N268PN5592PnonsynAAtCCt11117038-17040
ORF1ab/nsp13268N268VN5592VnonsynAAtGTt11117038-17040
ORF1ab/nsp13268N268FN5592FnonsynAAtTTt11117038-17040

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13268N268NaaTaaC322174322174All0.06162
ORF1ab/nsp13268N268NaaTaaC258834258834AY.40.402855
ORF1ab/nsp13268N268NaaTaaC4609646096AY.4.20.999761
ORF1ab/nsp13268N268NaaTaaC65656565AY.4.2.10.978099
ORF1ab/nsp13268N268NaaTaaC56765676B.1.617.20.021372
ORF1ab/nsp13268N268NaaTaaC13541354AY.4.10.998525
ORF1ab/nsp13268N268NaaTaaC966966AY.430.00428
ORF1ab/nsp13268N268NaaTaaC627627AY.420.025224
ORF1ab/nsp13268N268NaaTaaC438438AY.90.029607
ORF1ab/nsp13268N268SaAtaGt392397All0.000075
ORF1ab/nsp13268N268SaATaGC5397All0.000001
ORF1ab/nsp13268N268NaaTaaC300300B.1.4330.958466
ORF1ab/nsp13268N268HAatCat231231All0.000044
ORF1ab/nsp13268N268NaaTaaC217217AY.410.063786
ORF1ab/nsp13268N268HAatCat187187B.1.1.70.000167
ORF1ab/nsp13268N268NaaTaaC175175AY.390.004325
ORF1ab/nsp13268N268KaaTaaA114170All0.000022
ORF1ab/nsp13268N268KaaTaaG56170All0.000011
ORF1ab/nsp13268N268SaAtaGt165165B.1.1.70.000148
ORF1ab/nsp13268N268NaaTaaC105105AY.4.50.011287
ORF1ab/nsp13268N268KaaTaaA104104AY.420.004184
ORF1ab/nsp13268N268DAaTGaC7186All0.000014
ORF1ab/nsp13268N268DAatGat1586All0.000003
ORF1ab/nsp13268N268SaAtaGt7676AY.1190.002683
ORF1ab/nsp13268N268TaAtaCt7575All0.000014
ORF1ab/nsp13268N268NaaTaaC7171B.1.2580.004725
ORF1ab/nsp13268N268DAaTGaC6566AY.40.000101
ORF1ab/nsp13268N268DAatGat166AY.40.000002
ORF1ab/nsp13268N268NaaTaaC6161B.1.258.240.655914
ORF1ab/nsp13268N268NaaTaaC5252AY.46.60.003755
ORF1ab/nsp13268N268KaaTaaG4444B.1.1.70.000039
ORF1ab/nsp13268N268NaaTaaC3838AY.1200.001413
ORF1ab/nsp13268N268NaaTaaC3333AY.1020.000875
ORF1ab/nsp13268N268NaaTaaC3030AY.840.013123
ORF1ab/nsp13268N268NaaTaaC2727AY.50.000558
ORF1ab/nsp13268N268TaAtaCt2626B.1.1.70.000023
ORF1ab/nsp13268N268NaaTaaC2424AY.4.30.020202
ORF1ab/nsp13268N268TaAtaCt2020AY.260.000566
ORF1ab/nsp13268N268SaAtaGt1919AY.250.000114
ORF1ab/nsp13268N268SaAtaGt1819B.10.000165
ORF1ab/nsp13268N268SaATaGC119B.10.000009
ORF1ab/nsp13268N268NaaTaaC1818AY.1030.000112
ORF1ab/nsp13268N268NaaTaaC1717AY.330.001135
ORF1ab/nsp13268N268NaaTaaC1717AY.440.000103
ORF1ab/nsp13268N268NaaTaaC1717AY.460.001769
ORF1ab/nsp13268N268NaaTaaC1616AY.980.001264
ORF1ab/nsp13268N268delAAT---1515All0.000003
ORF1ab/nsp13268N268NaaTaaC1515AY.890.073529
ORF1ab/nsp13268N268SaAtaGt1515B.1.20.000132
ORF1ab/nsp13268N268IaAtaTt1313All0.000002
ORF1ab/nsp13268N268NaaTaaC1313AY.1170.001099
ORF1ab/nsp13268N268NaaTaaC1313AY.230.000907
ORF1ab/nsp13268N268NaaTaaC1313AY.450.001582
ORF1ab/nsp13268N268NaaTaaC1313AY.910.009496
ORF1ab/nsp13268N268NaaTaaC1313B.10.000119
ORF1ab/nsp13268N268NaaTaaC1212AY.5.30.004049
ORF1ab/nsp13268N268NaaTaaC1212AY.520.009772
ORF1ab/nsp13268N268NaaTaaC1212AY.540.001144
ORF1ab/nsp13268N268NaaTaaC1212AY.60.000494
ORF1ab/nsp13268N268NaaTaaC1212AY.990.012592
ORF1ab/nsp13268N268SaAtaGt1212B.1.1110.014101
ORF1ab/nsp13268N268HAatCat1212B.1.5260.000282
ORF1ab/nsp13268N268NaaTaaC1111AY.320.005857
ORF1ab/nsp13268N268HAatCat1010AY.330.000668
ORF1ab/nsp13268N268NaaTaaC1010AY.340.00097
ORF1ab/nsp13268N268NaaTaaC1010AY.46.10.010267
ORF1ab/nsp13268N268NaaTaaC1010AY.46.20.006353
ORF1ab/nsp13268N268HAatCat99A.2.50.004491
ORF1ab/nsp13268N268NaaTaaC99AY.130.001449
ORF1ab/nsp13268N268NaaTaaC99AY.590.004767
ORF1ab/nsp13268N268SaAtaGt99B.1.360.001313
ORF1ab/nsp13268N268KaaTaaA88AY.40.000012
ORF1ab/nsp13268N268NaaTaaC88AY.780.012327
ORF1ab/nsp13268N268DAaTGaC68B.1.617.20.000023
ORF1ab/nsp13268N268DAatGat28B.1.617.20.000008
ORF1ab/nsp13268N268NaaTaaC77B.1.1.70.000006
ORF1ab/nsp13268N268SaAtaGt77B.1.617.20.000026
ORF1ab/nsp13268N268NaaTaaC66AY.1190.000212
ORF1ab/nsp13268N268TaAtaCt66AY.40.000009
ORF1ab/nsp13268N268NaaTaaC66AY.4.40.002455
ORF1ab/nsp13268N268KaaTaaG66AY.75.10.001082
ORF1ab/nsp13268N268NaaTaaC66AY.75.10.001082
ORF1ab/nsp13268N268del1Aat-at35All0.000001
ORF1ab/nsp13268N268del1aaTaa-25All0
ORF1ab/nsp13268N268NaaTaaC55AY.1080.005513
ORF1ab/nsp13268N268NaaTaaC55AY.1090.003698
ORF1ab/nsp13268N268NaaTaaC55AY.1210.000677
ORF1ab/nsp13268N268SaAtaGt55AY.260.000142
ORF1ab/nsp13268N268SaAtaGt45AY.40.000006
ORF1ab/nsp13268N268SaATaGC15AY.40.000002
ORF1ab/nsp13268N268NaaTaaC55AY.800.005643
ORF1ab/nsp13268N268NaaTaaC55AY.880.004421
ORF1ab/nsp13268N268NaaTaaC55AY.920.001436
ORF1ab/nsp13268N268SaAtaGt55B.1.1600.000156
ORF1ab/nsp13268N268NaaTaaC55B.1.177.810.000947
ORF1ab/nsp13268N268delAAT---440.222222
ORF1ab/nsp13268N268NaaTaaC44AY.1050.002572
ORF1ab/nsp13268N268NaaTaaC44AY.1060.00134
ORF1ab/nsp13268N268NaaTaaC44AY.250.000024
ORF1ab/nsp13268N268NaaTaaC44AY.360.000593
ORF1ab/nsp13268N268HAatCat44AY.440.000024
ORF1ab/nsp13268N268NaaTaaC44AY.470.000124
ORF1ab/nsp13268N268NaaTaaC44AY.5.40.001107
ORF1ab/nsp13268N268NaaTaaC44AY.530.00115
ORF1ab/nsp13268N268NaaTaaC44AY.770.00451
ORF1ab/nsp13268N268NaaTaaC44AY.820.005427
ORF1ab/nsp13268N268NaaTaaC44AY.950.003044
ORF1ab/nsp13268N268NaaTaaC44AY.98.10.000194
ORF1ab/nsp13268N268del1Aat-at24B.1.1.70.000002
ORF1ab/nsp13268N268del1aaTaa-24B.1.1.70.000002
ORF1ab/nsp13268N268TaAtaCt44B.1.1490.013699
ORF1ab/nsp13268N268SaAtaGt44B.1.5550.088889
ORF1ab/nsp13268N268SaAtaGt44Q.80.00066
ORF1ab/nsp13268N268YAatTat33All0.000001
ORF1ab/nsp13268N268CAAtTGt33All0.000001
ORF1ab/nsp13268N268LAAtCTt33All0.000001
ORF1ab/nsp13268N268NaaTaaC33AY.140.000264
ORF1ab/nsp13268N268NaaTaaC33AY.160.001139
ORF1ab/nsp13268N268NaaTaaC33AY.34.10.00153
ORF1ab/nsp13268N268SaAtaGt33AY.450.000365
ORF1ab/nsp13268N268NaaTaaC33AY.46.40.000494
ORF1ab/nsp13268N268NaaTaaC33AY.560.004815
ORF1ab/nsp13268N268NaaTaaC33AY.750.000168
ORF1ab/nsp13268N268IaAtaTt33B.10.000027
ORF1ab/nsp13268N268TaAtaCt33B.10.000027
ORF1ab/nsp13268N268delAAT---33B.1.1.70.000003
ORF1ab/nsp13268N268SaAtaGt33B.1.760.034091
ORF1ab/nsp13268N268TaAtaCt220.111111
ORF1ab/nsp13268N268LAAtCTt220.111111
ORF1ab/nsp13268N268SaAtaGt22AU.30.004219
ORF1ab/nsp13268N268SaAtaGt22AY.1000.000092
ORF1ab/nsp13268N268DAatGat22AY.1000.000092
ORF1ab/nsp13268N268NaaTaaC22AY.1040.003968
ORF1ab/nsp13268N268SaAtaGt22AY.1180.000125
ORF1ab/nsp13268N268NaaTaaC22AY.120.000632
ORF1ab/nsp13268N268TaAtaCt22AY.1200.000074
ORF1ab/nsp13268N268NaaTaaC22AY.120.10.000642
ORF1ab/nsp13268N268SaAtaGt22AY.1210.000271
ORF1ab/nsp13268N268NaaTaaC22AY.190.002281
ORF1ab/nsp13268N268SaAtaGt12AY.340.000097
ORF1ab/nsp13268N268SaATaGC12AY.340.000097
ORF1ab/nsp13268N268SaAtaGt22AY.390.000049
ORF1ab/nsp13268N268SaATaGC22AY.4.20.000043
ORF1ab/nsp13268N268SaAtaGt22AY.4.2.10.000298
ORF1ab/nsp13268N268KaaTaaG22AY.4.40.000818
ORF1ab/nsp13268N268NaaTaaC22AY.400.001929
ORF1ab/nsp13268N268SaAtaGt22AY.440.000012
ORF1ab/nsp13268N268TaAtaCt22AY.460.000208
ORF1ab/nsp13268N268SaAtaGt22AY.460.000208
ORF1ab/nsp13268N268NaaTaaC22AY.580.001815
ORF1ab/nsp13268N268SaAtaGt22AY.690.000373
ORF1ab/nsp13268N268NaaTaaC22AY.730.001331
ORF1ab/nsp13268N268NaaTaaC22AY.810.003984
ORF1ab/nsp13268N268NaaTaaC22AY.860.00166
ORF1ab/nsp13268N268NaaTaaC22AY.99.10.003106
ORF1ab/nsp13268N268SaAtaGt22AY.99.20.000184
ORF1ab/nsp13268N268NaaTaaC22B.1.10.000036
ORF1ab/nsp13268N268NaaTaaC22B.1.1.2160.001781
ORF1ab/nsp13268N268KaaTaaG22B.1.1.3180.000604
ORF1ab/nsp13268N268IaAtaTt22B.1.1.70.000002
ORF1ab/nsp13268N268IaAtaTt22B.1.20.000018
ORF1ab/nsp13268N268HAatCat22B.1.360.000292
ORF1ab/nsp13268N268NaaTaaC22B.1.360.000292
ORF1ab/nsp13268N268SaAtaGt22B.1.3660.009756
ORF1ab/nsp13268N268NaaTaaC22B.1.5950.000522
ORF1ab/nsp13268N268NaaTaaC22B.1.6120.005305
ORF1ab/nsp13268N268NaaTaaC110.055556
ORF1ab/nsp13268N268FAAtTTt11All0
ORF1ab/nsp13268N268del2AAt--t11All0
ORF1ab/nsp13268N268VAAtGTt11All0
ORF1ab/nsp13268N268PAAtCCt11All0
ORF1ab/nsp13268N268NaaTaaC11AY.100.00053
ORF1ab/nsp13268N268NaaTaaC11AY.1000.000046
ORF1ab/nsp13268N268TaAtaCt11AY.1000.000046
ORF1ab/nsp13268N268NaaTaaC11AY.1010.00049
ORF1ab/nsp13268N268DAatGat11AY.1030.000006
ORF1ab/nsp13268N268KaaTaaG11AY.1030.000006
ORF1ab/nsp13268N268SaAtaGt11AY.1030.000006
ORF1ab/nsp13268N268HAatCat11AY.1030.000006
ORF1ab/nsp13268N268delAAT---11AY.1080.001103
ORF1ab/nsp13268N268NaaTaaC11AY.110.001339
ORF1ab/nsp13268N268NaaTaaC11AY.1100.000113
ORF1ab/nsp13268N268NaaTaaC11AY.1110.000183
ORF1ab/nsp13268N268YAatTat11AY.1130.000142
ORF1ab/nsp13268N268NaaTaaC11AY.1130.000142
ORF1ab/nsp13268N268NaaTaaC11AY.116.10.000311
ORF1ab/nsp13268N268NaaTaaC11AY.1180.000063
ORF1ab/nsp13268N268SaAtaGt11AY.1200.000037
ORF1ab/nsp13268N268NaaTaaC11AY.120.2.10.000498
ORF1ab/nsp13268N268SaAtaGt11AY.200.000039
ORF1ab/nsp13268N268SaAtaGt11AY.23.10.000417
ORF1ab/nsp13268N268FAAtTTt11AY.240.000431
ORF1ab/nsp13268N268HAatCat11AY.250.000006
ORF1ab/nsp13268N268DAatGat11AY.260.000028
ORF1ab/nsp13268N268SaAtaGt11AY.290.000016
ORF1ab/nsp13268N268NaaTaaC11AY.29.10.000221
ORF1ab/nsp13268N268SaAtaGt11AY.30.00001
ORF1ab/nsp13268N268DAatGat11AY.30.00001
ORF1ab/nsp13268N268SaAtaGt11AY.330.000067
ORF1ab/nsp13268N268delAAT---11AY.330.000067
ORF1ab/nsp13268N268NaaTaaC11AY.350.000233
ORF1ab/nsp13268N268DAatGat11AY.390.000025
ORF1ab/nsp13268N268HAatCat11AY.390.000025
ORF1ab/nsp13268N268SaAtaGt11AY.39.10.00004
ORF1ab/nsp13268N268TaAtaCt11AY.4.50.000107
ORF1ab/nsp13268N268TaAtaCt11AY.430.000004
ORF1ab/nsp13268N268delAAT---11AY.430.000004
ORF1ab/nsp13268N268DAatGat11AY.430.000004
ORF1ab/nsp13268N268CAAtTGt11AY.440.000006
ORF1ab/nsp13268N268DAatGat11AY.46.40.000165
ORF1ab/nsp13268N268NaaTaaC11AY.46.50.000198
ORF1ab/nsp13268N268SaAtaGt11AY.470.000031
ORF1ab/nsp13268N268DAatGat11AY.470.000031
ORF1ab/nsp13268N268NaaTaaC11AY.490.003195
ORF1ab/nsp13268N268SaAtaGt11AY.50.000021
ORF1ab/nsp13268N268HAatCat11AY.5.40.000277
ORF1ab/nsp13268N268NaaTaaC11AY.620.000436
ORF1ab/nsp13268N268NaaTaaC11AY.640.000595
ORF1ab/nsp13268N268NaaTaaC11AY.660.00107
ORF1ab/nsp13268N268CAAtTGt11AY.670.000464
ORF1ab/nsp13268N268NaaTaaC11AY.680.000274
ORF1ab/nsp13268N268NaaTaaC11AY.690.000187
ORF1ab/nsp13268N268SaAtaGt11AY.7.10.000113
ORF1ab/nsp13268N268IaAtaTt11AY.700.000209
ORF1ab/nsp13268N268NaaTaaC11AY.710.000475
ORF1ab/nsp13268N268CAAtTGt11AY.750.000056
ORF1ab/nsp13268N268NaaTaaC11AY.790.001211
ORF1ab/nsp13268N268NaaTaaC11AY.850.000427
ORF1ab/nsp13268N268NaaTaaC11AY.870.000833
ORF1ab/nsp13268N268NaaTaaC11AY.9.20.000037
ORF1ab/nsp13268N268NaaTaaC11AY.930.000273
ORF1ab/nsp13268N268delAAT---11AY.990.001049
ORF1ab/nsp13268N268del1Aat-at11B.10.000009
ORF1ab/nsp13268N268HAatCat11B.10.000009
ORF1ab/nsp13268N268delAAT---11B.1.10.000018
ORF1ab/nsp13268N268SaAtaGt11B.1.10.000018
ORF1ab/nsp13268N268KaaTaaA11B.1.1.2050.003717
ORF1ab/nsp13268N268HAatCat11B.1.1.250.000569
ORF1ab/nsp13268N268NaaTaaC11B.1.1.2840.000107
ORF1ab/nsp13268N268NaaTaaC11B.1.1.2940.001266
ORF1ab/nsp13268N268SaAtaGt11B.1.1.3180.000302
ORF1ab/nsp13268N268SaAtaGt11B.1.1.3260.001761
ORF1ab/nsp13268N268SaAtaGt11B.1.1.5190.00004
ORF1ab/nsp13268N268SaAtaGt11B.1.1.5260.003546
ORF1ab/nsp13268N268DAatGat11B.1.1.70.000001
ORF1ab/nsp13268N268YAatTat11B.1.1.70.000001
ORF1ab/nsp13268N268PAAtCCt11B.1.1.70.000001
ORF1ab/nsp13268N268VAAtGTt11B.1.1.70.000001
ORF1ab/nsp13268N268NaaTaaC11B.1.110.30.000718
ORF1ab/nsp13268N268DAatGat11B.1.1190.010526
ORF1ab/nsp13268N268NaaTaaC11B.1.1600.000031
ORF1ab/nsp13268N268NaaTaaC11B.1.1770.000013
ORF1ab/nsp13268N268delAAT---11B.1.177.150.000631
ORF1ab/nsp13268N268IaAtaTt11B.1.177.650.000665
ORF1ab/nsp13268N268del2AAt--t11B.1.177.70.000165
ORF1ab/nsp13268N268TaAtaCt11B.1.20.000009
ORF1ab/nsp13268N268NaaTaaC11B.1.20.000009
ORF1ab/nsp13268N268LAAtCTt11B.1.20.000009
ORF1ab/nsp13268N268YAatTat11B.1.214.20.0006
ORF1ab/nsp13268N268TaAtaCt11B.1.2210.000071
ORF1ab/nsp13268N268KaaTaaG11B.1.2430.00007
ORF1ab/nsp13268N268NaaTaaC11B.1.258.110.000396
ORF1ab/nsp13268N268NaaTaaC11B.1.3110.000275
ORF1ab/nsp13268N268TaAtaCt11B.1.3200.001245
ORF1ab/nsp13268N268TaAtaCt11B.1.3360.002439
ORF1ab/nsp13268N268IaAtaTt11B.1.36.100.004785
ORF1ab/nsp13268N268NaaTaaC11B.1.3670.000792
ORF1ab/nsp13268N268TaAtaCt11B.1.4270.00005
ORF1ab/nsp13268N268SaAtaGt11B.1.4270.00005
ORF1ab/nsp13268N268delAAT---11B.1.4270.00005
ORF1ab/nsp13268N268DAatGat11B.1.4290.000024
ORF1ab/nsp13268N268KaaTaaA11B.1.4330.003195
ORF1ab/nsp13268N268NaaTaaC11B.1.438.10.000107
ORF1ab/nsp13268N268TaAtaCt11B.1.4560.003268
ORF1ab/nsp13268N268SaAtaGt11B.1.5960.000087
ORF1ab/nsp13268N268IaAtaTt11B.1.5960.000087
ORF1ab/nsp13268N268TaAtaCt11B.1.5960.000087
ORF1ab/nsp13268N268NaaTaaC11B.1.5960.000087
ORF1ab/nsp13268N268IaAtaTt11B.1.617.20.000004
ORF1ab/nsp13268N268delAAT---11B.1.617.20.000004
ORF1ab/nsp13268N268HAatCat11B.1.617.20.000004
ORF1ab/nsp13268N268NaaTaaC11B.1.6280.000352
ORF1ab/nsp13268N268NaaTaaC11B.400.000364
ORF1ab/nsp13268N268NaaTaaC11B.550.00295
ORF1ab/nsp13268N268IaAtaTt11D.20.000075
ORF1ab/nsp13268N268NaaTaaC11P.10.000016
ORF1ab/nsp13268N268SaAtaGt11P.10.000016
ORF1ab/nsp13268N268SaAtaGt11P.1.150.000232