CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 260 | D260Y | D5584Y | nonsyn | Gat | Tat | 66390 | 66389 | 0.999985 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260Y | D5584Y | nonsyn | GaT | TaC | 66390 | 1 | 0.0000150625 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260D | D5584D | syn | gaT | gaC | 404 | 404 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260N | D5584N | nonsyn | Gat | Aat | 332 | 332 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260G | D5584G | nonsyn | gAt | gGt | 106 | 106 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260H | D5584H | nonsyn | Gat | Cat | 90 | 90 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260E | D5584E | nonsyn | gaT | gaG | 33 | 20 | 0.606061 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260E | D5584E | nonsyn | gaT | gaA | 33 | 13 | 0.393939 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260del | D5584del | del | GAT | --- | 32 | 32 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260A | D5584A | nonsyn | gAt | gCt | 28 | 28 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260V | D5584V | nonsyn | gAt | gTt | 12 | 12 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260del1 | D5584del1 | del | Gat | -at | 5 | 4 | 0.8 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260del1 | D5584del1 | del | gaT | ga- | 5 | 1 | 0.2 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260I | D5584I | nonsyn | GAT | ATC | 2 | 2 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260R | D5584R | nonsyn | GAt | CGt | 1 | 1 | 1 | 17014-17016 |
ORF1ab/nsp13 | 260 | D260S | D5584S | nonsyn | GAt | AGt | 1 | 1 | 1 | 17014-17016 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 66389 | 66390 | All | 0.012698 |
ORF1ab/nsp13 | 260 | D260Y | GaT | TaC | 1 | 66390 | All | 0 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 41934 | 41934 | B.1.429 | 0.986659 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 19604 | 19604 | B.1.427 | 0.989951 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1364 | 1365 | B.1 | 0.012494 |
ORF1ab/nsp13 | 260 | D260Y | GaT | TaC | 1 | 1365 | B.1 | 0.000009 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 501 | 501 | B.1.1.70 | 0.170873 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 404 | 404 | All | 0.000077 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 403 | 403 | AY.37 | 0.12737 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 393 | 393 | AY.4 | 0.000612 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 377 | 377 | A.28 | 0.997354 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 332 | 332 | All | 0.000063 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 257 | 257 | B.1.351.2 | 0.077761 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 187 | 187 | B.1.1 | 0.003392 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 123 | 123 | B.1.1.7 | 0.00011 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 106 | 106 | All | 0.00002 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 91 | 91 | B.1.1.7 | 0.000081 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 90 | 90 | All | 0.000017 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 83 | 83 | B.1.429.1 | 1 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 81 | 81 | AY.44 | 0.000493 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 75 | 75 | AY.107 | 0.034949 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 69 | 69 | AY.4 | 0.000107 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 62 | 62 | B.1.595 | 0.01618 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 57 | 57 | B.1.2 | 0.000502 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 56 | 56 | B.1.617.2 | 0.000211 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 49 | 49 | B.1.1.432 | 0.062025 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 49 | 49 | B.1.2 | 0.000431 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 47 | 47 | AY.43 | 0.000208 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 42 | 42 | B.1.1.220 | 0.078067 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 41 | 41 | AY.26 | 0.001161 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 36 | 36 | B.1.311 | 0.009885 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 36 | 36 | B.1.94 | 0.972973 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 35 | 35 | AY.25 | 0.000211 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 34 | 34 | B.1.1.416 | 0.030769 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 20 | 33 | All | 0.000004 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 13 | 33 | All | 0.000002 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 32 | 32 | All | 0.000006 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 28 | 28 | All | 0.000005 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 28 | 28 | AY.9.1 | 0.002344 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 27 | 27 | AY.57 | 0.017717 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 26 | 26 | AY.20 | 0.00101 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 26 | 26 | B.1.1.214 | 0.001442 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 26 | 26 | B.1.596 | 0.002266 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 24 | 24 | AY.5 | 0.000496 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 21 | 21 | AY.75.1 | 0.003787 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 21 | 21 | B.1.2 | 0.000185 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 20 | 20 | B.1.617.2 | 0.000075 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 19 | 19 | AY.39 | 0.00047 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 19 | 19 | AY.85 | 0.008116 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 19 | 19 | B.1.239 | 0.023199 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 19 | 19 | B.1.367 | 0.015055 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 18 | 18 | AY.102 | 0.000477 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 18 | 18 | B.1.177 | 0.000237 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 17 | 17 | B.1.160 | 0.00053 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 17 | 17 | P.1 | 0.000268 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 16 | 16 | AY.120 | 0.000595 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 16 | 16 | B.1.1.519 | 0.000635 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 16 | 16 | B.1.243 | 0.001113 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 15 | 15 | AY.4 | 0.000023 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 15 | 15 | B | 0.001917 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 15 | 15 | B.1.591 | 0.159574 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 14 | 14 | B.1.336 | 0.034146 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 13 | 13 | A | 0.005031 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 13 | 13 | B.1.575.1 | 0.031707 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 12 | 12 | All | 0.000002 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 12 | 12 | AY.103 | 0.000075 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 11 | 11 | AY.103 | 0.000068 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 11 | 11 | AY.3 | 0.000109 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 11 | 11 | AY.69 | 0.002053 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 11 | 11 | B.1.618 | 0.044355 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 10 | 10 | AY.5 | 0.000206 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 10 | 10 | AY.7.1 | 0.001127 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 10 | 10 | B.1.234 | 0.001319 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 9 | 9 | AY.39 | 0.000222 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 9 | 9 | AY.47 | 0.00028 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 9 | 9 | AY.98.1 | 0.000436 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 9 | 9 | B.1.258 | 0.000599 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 8 | 8 | A.2.5 | 0.003992 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 8 | 8 | AY.46 | 0.000833 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 8 | 8 | B.1.157 | 0.023881 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 8 | 8 | B.1.561 | 0.003176 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 8 | 8 | B.1.609 | 0.003835 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 8 | 8 | N.5 | 0.014134 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 7 | 7 | AY.3 | 0.00007 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 7 | 7 | AY.54 | 0.000667 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | B.1.1.192 | 0.016166 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | B.1.1.316 | 0.006475 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | B.1.621.1 | 0.003541 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 7 | 7 | B.11 | 0.035897 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 6 | 6 | AY.102 | 0.000159 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 6 | 6 | AY.25 | 0.000036 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 6 | 6 | AY.26 | 0.00017 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | AY.39.1 | 0.000238 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 6 | 6 | B.1.177 | 0.000079 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | B.1.177.73 | 0.003398 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | B.1.623 | 0.003219 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 6 | 6 | R.1 | 0.00054 |
ORF1ab/nsp13 | 260 | D260del1 | Gat | -at | 4 | 5 | All | 0.000001 |
ORF1ab/nsp13 | 260 | D260del1 | gaT | ga- | 1 | 5 | All | 0 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | AY.75 | 0.00028 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | B.1.1.335 | 0.064935 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | B.1.1.507 | 0.043478 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 5 | 5 | B.1.258 | 0.000333 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | B.1.375 | 0.004098 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 5 | 5 | B.1.441 | 0.048077 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | A.2.5.2 | 0.006289 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | AY.107 | 0.001864 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | AY.117 | 0.000338 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | B.1.1.302 | 0.008299 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 4 | 4 | B.1.1.347 | 0.072727 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | B.1.324 | 0.006421 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 4 | 4 | B.1.411 | 0.014815 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | AZ.2 | 0.002463 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.269 | 0.00406 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.1.517 | 0.020408 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.36.1 | 0.003421 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp13 | 260 | D260I | GAT | ATC | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 260 | D260del1 | Gat | -at | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp13 | 260 | D260I | GAT | ATC | 2 | 2 | All | 0 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AP.1 | 0.003003 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.1.229 | 0.011494 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.1.301 | 0.002358 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.126 | 0.002551 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.177.65 | 0.001331 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp13 | 260 | D260del1 | Gat | -at | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 260 | D260del1 | gaT | ga- | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.281 | 0.043478 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | B.1.443 | 0.009346 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | A | 0.000387 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | A.2.3 | 0.004739 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp13 | 260 | D260S | GAt | AGt | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 260 | D260R | GAt | CGt | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 260 | D260S | GAt | AGt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaG | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 260 | D260del1 | Gat | -at | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.225 | 0.007194 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.514 | 0.038462 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.108 | 0.005814 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.160.10 | 0.008065 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp13 | 260 | D260A | gAt | gCt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.252 | 0.006623 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.289 | 0.00266 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.354 | 0.043478 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp13 | 260 | D260R | GAt | CGt | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.437 | 0.020833 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.451 | 0.008197 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | B.1.473 | 0.019231 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 1 | 1 | B.1.520 | 0.021739 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.550 | 0.013699 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp13 | 260 | D260V | gAt | gTt | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.6 | 0.017241 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 260 | D260N | Gat | Aat | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.639 | 0.021739 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.9 | 0.006173 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp13 | 260 | D260G | gAt | gGt | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp13 | 260 | D260E | gaT | gaA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp13 | 260 | D260H | Gat | Cat | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp13 | 260 | D260D | gaT | gaC | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | P.4 | 0.003802 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp13 | 260 | D260Y | Gat | Tat | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp13 | 260 | D260del | GAT | --- | 1 | 1 | Q.8 | 0.000165 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|