CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 236

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13236S236IS5560InonsynaGtaTt28192819116942-16944
ORF1ab/nsp13236S236SS5560SsynagTagC439439116942-16944
ORF1ab/nsp13236S236GS5560GnonsynAgtGgt1791770.98882716942-16944
ORF1ab/nsp13236S236GS5560GnonsynAgTGgC17920.011173216942-16944
ORF1ab/nsp13236S236NS5560NnonsynaGtaAt79780.98734216942-16944
ORF1ab/nsp13236S236NS5560NnonsynaGTaAC7910.012658216942-16944
ORF1ab/nsp13236S236delS5560deldelAGT---2323116942-16944
ORF1ab/nsp13236S236RS5560RnonsynAgtCgt1580.53333316942-16944
ORF1ab/nsp13236S236RS5560RnonsynagTagA1540.26666716942-16944
ORF1ab/nsp13236S236RS5560RnonsynagTagG1530.216942-16944
ORF1ab/nsp13236S236CS5560CnonsynAgtTgt1090.916942-16944
ORF1ab/nsp13236S236CS5560CnonsynAgTTgC1010.116942-16944
ORF1ab/nsp13236S236TS5560TnonsynaGtaCt77116942-16944
ORF1ab/nsp13236S236VS5560VnonsynAGtGTt33116942-16944
ORF1ab/nsp13236S236KS5560KnonsynaGTaAA320.66666716942-16944
ORF1ab/nsp13236S236del2S5560del2delAGt--t320.66666716942-16944
ORF1ab/nsp13236S236KS5560KnonsynaGTaAG310.33333316942-16944
ORF1ab/nsp13236S236del2S5560del2delAGT--N310.33333316942-16944
ORF1ab/nsp13236S236MS5560MnonsynaGTaTG22116942-16944
ORF1ab/nsp13236S236FS5560FnonsynAGtTTt22116942-16944
ORF1ab/nsp13236S236WS5560WnonsynAgTTgG11116942-16944
ORF1ab/nsp13236S236LS5560LnonsynAGTTTG11116942-16944

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13236S236IaGtaTt28192819All0.000539
ORF1ab/nsp13236S236IaGtaTt703703AY.98.10.034047
ORF1ab/nsp13236S236IaGtaTt640640B.1.1.70.000573
ORF1ab/nsp13236S236SagTagC439439All0.000084
ORF1ab/nsp13236S236GAgtGgt177179All0.000034
ORF1ab/nsp13236S236GAgTGgC2179All0
ORF1ab/nsp13236S236SagTagC175175B.1.617.20.000659
ORF1ab/nsp13236S236IaGtaTt161161B.1.20.001418
ORF1ab/nsp13236S236IaGtaTt128128AY.40.000199
ORF1ab/nsp13236S236IaGtaTt106106AY.430.00047
ORF1ab/nsp13236S236GAgtGgt9898R.10.008821
ORF1ab/nsp13236S236IaGtaTt9696AY.250.000577
ORF1ab/nsp13236S236IaGtaTt8989B.1.2580.005923
ORF1ab/nsp13236S236NaGtaAt7879All0.000015
ORF1ab/nsp13236S236NaGTaAC179All0
ORF1ab/nsp13236S236SagTagC7171B.1.1.70.000064
ORF1ab/nsp13236S236IaGtaTt7070B.1.617.20.000264
ORF1ab/nsp13236S236SagTagC6060AY.430.000266
ORF1ab/nsp13236S236IaGtaTt5454AY.9.20.001983
ORF1ab/nsp13236S236IaGtaTt5050D.20.003752
ORF1ab/nsp13236S236IaGtaTt4040B.1.1600.001248
ORF1ab/nsp13236S236IaGtaTt3838AY.1030.000236
ORF1ab/nsp13236S236IaGtaTt3737B.1.10.000671
ORF1ab/nsp13236S236IaGtaTt3636B.1.1.5190.00143
ORF1ab/nsp13236S236IaGtaTt3030AY.230.002092
ORF1ab/nsp13236S236SagTagC3030B.1.1.3320.9375
ORF1ab/nsp13236S236NaGtaAt3030B.1.1.70.000027
ORF1ab/nsp13236S236IaGtaTt2929AY.410.008524
ORF1ab/nsp13236S236IaGtaTt2727B.1.1770.000356
ORF1ab/nsp13236S236IaGtaTt2626P.10.00041
ORF1ab/nsp13236S236delAGT---2323All0.000004
ORF1ab/nsp13236S236GAgtGgt2121B.1.1.70.000019
ORF1ab/nsp13236S236IaGtaTt2020AY.200.000777
ORF1ab/nsp13236S236IaGtaTt1919B.1.1.2140.001054
ORF1ab/nsp13236S236IaGtaTt1818AY.440.00011
ORF1ab/nsp13236S236IaGtaTt1818B.10.000165
ORF1ab/nsp13236S236IaGtaTt1818R.10.00162
ORF1ab/nsp13236S236IaGtaTt1616AY.1020.000424
ORF1ab/nsp13236S236IaGtaTt1616AY.30.000159
ORF1ab/nsp13236S236RAgtCgt815All0.000002
ORF1ab/nsp13236S236RagTagA415All0.000001
ORF1ab/nsp13236S236RagTagG315All0.000001
ORF1ab/nsp13236S236IaGtaTt1515AY.270.000971
ORF1ab/nsp13236S236GAgtGgt1515B.1.10.000272
ORF1ab/nsp13236S236IaGtaTt1414B.1.4270.000707
ORF1ab/nsp13236S236SagTagC1212AY.99.20.001106
ORF1ab/nsp13236S236IaGtaTt1111AY.140.000968
ORF1ab/nsp13236S236SagTagC1111AY.40.000017
ORF1ab/nsp13236S236CAgtTgt910All0.000002
ORF1ab/nsp13236S236CAgTTgC110All0
ORF1ab/nsp13236S236IaGtaTt1010AY.240.00431
ORF1ab/nsp13236S236IaGtaTt1010AY.390.000247
ORF1ab/nsp13236S236IaGtaTt1010B.1.3510.000297
ORF1ab/nsp13236S236SagTagC1010P.1.140.000478
ORF1ab/nsp13236S236IaGtaTt99AY.29.10.001985
ORF1ab/nsp13236S236IaGtaTt99AY.980.000711
ORF1ab/nsp13236S236IaGtaTt99P.20.00168
ORF1ab/nsp13236S236IaGtaTt88AY.330.000534
ORF1ab/nsp13236S236NaGtaAt88AY.40.000012
ORF1ab/nsp13236S236IaGtaTt88B.1.5960.000697
ORF1ab/nsp13236S236TaGtaCt77All0.000001
ORF1ab/nsp13236S236GAgtGgt77B.10.000064
ORF1ab/nsp13236S236delAGT---77B.1.1.70.000006
ORF1ab/nsp13236S236SagTagC66AY.330.000401
ORF1ab/nsp13236S236GAgtGgt66AY.40.000009
ORF1ab/nsp13236S236IaGtaTt66AY.46.60.000433
ORF1ab/nsp13236S236SagTagC66B.1.10.000109
ORF1ab/nsp13236S236IaGtaTt66B.1.2430.000418
ORF1ab/nsp13236S236IaGtaTt66B.1.36.290.003104
ORF1ab/nsp13236S236IaGtaTt66B.1.617.10.000774
ORF1ab/nsp13236S236SagTagC55AY.1030.000031
ORF1ab/nsp13236S236IaGtaTt55AY.1190.000177
ORF1ab/nsp13236S236IaGtaTt55B.1.177.750.005203
ORF1ab/nsp13236S236SagTagC55B.1.4160.006345
ORF1ab/nsp13236S236IaGtaTt55B.1.4290.000118
ORF1ab/nsp13236S236delAGT---440.222222
ORF1ab/nsp13236S236IaGtaTt44AY.160.001519
ORF1ab/nsp13236S236SagTagC44AY.440.000024
ORF1ab/nsp13236S236GAgtGgt34AY.440.000018
ORF1ab/nsp13236S236GAgTGgC14AY.440.000006
ORF1ab/nsp13236S236IaGtaTt44AY.450.000487
ORF1ab/nsp13236S236NaGtaAt44AY.450.000487
ORF1ab/nsp13236S236IaGtaTt44AY.920.001149
ORF1ab/nsp13236S236IaGtaTt44B.1.1.1530.004381
ORF1ab/nsp13236S236IaGtaTt44B.1.1.930.102564
ORF1ab/nsp13236S236NaGtaAt44B.1.160.90.028777
ORF1ab/nsp13236S236TaGtaCt44B.1.2350.010076
ORF1ab/nsp13236S236IaGtaTt44B.1.5260.000094
ORF1ab/nsp13236S236IaGtaTt44B.1.5900.018182
ORF1ab/nsp13236S236NaGtaAt44B.1.617.20.000015
ORF1ab/nsp13236S236VAGtGTt33All0.000001
ORF1ab/nsp13236S236del2AGt--t23All0
ORF1ab/nsp13236S236KaGTaAA23All0
ORF1ab/nsp13236S236del2AGT--N13All0
ORF1ab/nsp13236S236KaGTaAG13All0
ORF1ab/nsp13236S236IaGtaTt33AY.10.001187
ORF1ab/nsp13236S236IaGtaTt33AY.1130.000427
ORF1ab/nsp13236S236IaGtaTt33AY.1180.000188
ORF1ab/nsp13236S236IaGtaTt33AY.1200.000112
ORF1ab/nsp13236S236NaGtaAt33AY.250.000018
ORF1ab/nsp13236S236SagTagC33AY.30.00003
ORF1ab/nsp13236S236IaGtaTt33AY.3.10.000256
ORF1ab/nsp13236S236IaGtaTt33AY.360.000445
ORF1ab/nsp13236S236NaGtaAt33AY.440.000018
ORF1ab/nsp13236S236IaGtaTt33AY.470.000093
ORF1ab/nsp13236S236IaGtaTt33AY.50.000062
ORF1ab/nsp13236S236IaGtaTt33AY.610.000314
ORF1ab/nsp13236S236IaGtaTt33AY.680.000821
ORF1ab/nsp13236S236SagTagC33B.10.000027
ORF1ab/nsp13236S236IaGtaTt33B.1.1.250.001706
ORF1ab/nsp13236S236IaGtaTt33B.1.1.3190.052632
ORF1ab/nsp13236S236SagTagC33B.1.20.000026
ORF1ab/nsp13236S236GAgtGgt23B.1.20.000018
ORF1ab/nsp13236S236GAgTGgC13B.1.20.000009
ORF1ab/nsp13236S236IaGtaTt33B.1.5400.029126
ORF1ab/nsp13236S236IaGtaTt33B.1.6210.000266
ORF1ab/nsp13236S236IaGtaTt33B.60.00273
ORF1ab/nsp13236S236VAGtGTt220.111111
ORF1ab/nsp13236S236GAgtGgt220.111111
ORF1ab/nsp13236S236MaGTaTG22All0
ORF1ab/nsp13236S236FAGtTTt22All0
ORF1ab/nsp13236S236IaGtaTt22AY.1000.000092
ORF1ab/nsp13236S236GAgtGgt22AY.1020.000053
ORF1ab/nsp13236S236SagTagC22AY.1160.000574
ORF1ab/nsp13236S236SagTagC22AY.260.000057
ORF1ab/nsp13236S236SagTagC22AY.390.000049
ORF1ab/nsp13236S236GAgtGgt22AY.39.10.000079
ORF1ab/nsp13236S236CAgtTgt22AY.40.000003
ORF1ab/nsp13236S236SagTagC22AY.4.20.000043
ORF1ab/nsp13236S236NaGtaAt22AY.430.000009
ORF1ab/nsp13236S236IaGtaTt22AY.46.40.000329
ORF1ab/nsp13236S236IaGtaTt22AY.5.30.000675
ORF1ab/nsp13236S236IaGtaTt22AY.5.40.000553
ORF1ab/nsp13236S236SagTagC22AY.60.000082
ORF1ab/nsp13236S236IaGtaTt22B0.000256
ORF1ab/nsp13236S236RAgtCgt22B.10.000018
ORF1ab/nsp13236S236IaGtaTt22B.1.1.10.000653
ORF1ab/nsp13236S236IaGtaTt22B.1.1.100.00223
ORF1ab/nsp13236S236IaGtaTt22B.1.1.1980.002937
ORF1ab/nsp13236S236GAgtGgt22B.1.1.2140.000111
ORF1ab/nsp13236S236SagTagC22B.1.1.280.000622
ORF1ab/nsp13236S236IaGtaTt22B.1.1.3050.007722
ORF1ab/nsp13236S236NaGtaAt22B.1.1.5190.000079
ORF1ab/nsp13236S236KaGTaAG12B.1.1.70.000001
ORF1ab/nsp13236S236KaGTaAA12B.1.1.70.000001
ORF1ab/nsp13236S236IaGtaTt22B.1.1.890.012121
ORF1ab/nsp13236S236NaGtaAt22B.1.1600.000062
ORF1ab/nsp13236S236IaGtaTt22B.1.177.210.000153
ORF1ab/nsp13236S236IaGtaTt22B.1.177.520.003515
ORF1ab/nsp13236S236IaGtaTt22B.1.177.770.001452
ORF1ab/nsp13236S236SagTagC22B.1.2210.000142
ORF1ab/nsp13236S236IaGtaTt22B.1.2210.000142
ORF1ab/nsp13236S236IaGtaTt22B.1.2340.000264
ORF1ab/nsp13236S236IaGtaTt22B.1.258.170.000208
ORF1ab/nsp13236S236GAgtGgt22B.1.258.30.00335
ORF1ab/nsp13236S236SagTagC22B.1.3510.000059
ORF1ab/nsp13236S236IaGtaTt22B.1.360.000292
ORF1ab/nsp13236S236IaGtaTt22B.1.4970.00063
ORF1ab/nsp13236S236IaGtaTt22B.1.6090.000959
ORF1ab/nsp13236S236GAgtGgt22B.1.617.10.000258
ORF1ab/nsp13236S236delAGT---22B.1.617.20.000008
ORF1ab/nsp13236S236GAgtGgt22B.1.617.20.000008
ORF1ab/nsp13236S236CAgtTgt12B.1.617.20.000004
ORF1ab/nsp13236S236CAgTTgC12B.1.617.20.000004
ORF1ab/nsp13236S236SagTagC22B.1.6370.000146
ORF1ab/nsp13236S236IaGtaTt22B.260.029412
ORF1ab/nsp13236S236IaGtaTt22C.120.014388
ORF1ab/nsp13236S236IaGtaTt22P.1.140.000096
ORF1ab/nsp13236S236FAGtTTt110.055556
ORF1ab/nsp13236S236WAgTTgG110.055556
ORF1ab/nsp13236S236MaGTaTG110.055556
ORF1ab/nsp13236S236IaGtaTt110.055556
ORF1ab/nsp13236S236RagTagG110.055556
ORF1ab/nsp13236S236CAgtTgt110.055556
ORF1ab/nsp13236S236LAGTTTG110.055556
ORF1ab/nsp13236S236IaGtaTt11A0.000387
ORF1ab/nsp13236S236IaGtaTt11A.20.000662
ORF1ab/nsp13236S236RAgtCgt11A.270.001656
ORF1ab/nsp13236S236LAGTTTG11All0
ORF1ab/nsp13236S236WAgTTgG11All0
ORF1ab/nsp13236S236SagTagC11AY.1000.000046
ORF1ab/nsp13236S236SagTagC11AY.1020.000027
ORF1ab/nsp13236S236CAgtTgt11AY.1030.000006
ORF1ab/nsp13236S236NaGtaAt11AY.1030.000006
ORF1ab/nsp13236S236IaGtaTt11AY.1060.000335
ORF1ab/nsp13236S236delAGT---11AY.1080.001103
ORF1ab/nsp13236S236IaGtaTt11AY.1140.000231
ORF1ab/nsp13236S236RAgtCgt11AY.1170.000085
ORF1ab/nsp13236S236NaGtaAt11AY.1170.000085
ORF1ab/nsp13236S236NaGtaAt11AY.120.000316
ORF1ab/nsp13236S236IaGtaTt11AY.16.10.00047
ORF1ab/nsp13236S236SagTagC11AY.230.00007
ORF1ab/nsp13236S236SagTagC11AY.250.000006
ORF1ab/nsp13236S236IaGtaTt11AY.260.000028
ORF1ab/nsp13236S236IaGtaTt11AY.290.000016
ORF1ab/nsp13236S236NaGtaAt11AY.30.00001
ORF1ab/nsp13236S236IaGtaTt11AY.320.000532
ORF1ab/nsp13236S236IaGtaTt11AY.340.000097
ORF1ab/nsp13236S236IaGtaTt11AY.350.000233
ORF1ab/nsp13236S236GAgtGgt11AY.390.000025
ORF1ab/nsp13236S236delAGT---11AY.40.000002
ORF1ab/nsp13236S236RagTagG11AY.40.000002
ORF1ab/nsp13236S236IaGtaTt11AY.4.20.000022
ORF1ab/nsp13236S236IaGtaTt11AY.4.50.000107
ORF1ab/nsp13236S236NaGtaAt11AY.420.00004
ORF1ab/nsp13236S236IaGtaTt11AY.420.00004
ORF1ab/nsp13236S236SagTagC11AY.420.00004
ORF1ab/nsp13236S236delAGT---11AY.430.000004
ORF1ab/nsp13236S236TaGtaCt11AY.430.000004
ORF1ab/nsp13236S236TaGtaCt11AY.440.000006
ORF1ab/nsp13236S236CAgtTgt11AY.440.000006
ORF1ab/nsp13236S236del2AGt--t11AY.440.000006
ORF1ab/nsp13236S236SagTagC11AY.450.000122
ORF1ab/nsp13236S236SagTagC11AY.5.30.000337
ORF1ab/nsp13236S236IaGtaTt11AY.510.000909
ORF1ab/nsp13236S236IaGtaTt11AY.530.000288
ORF1ab/nsp13236S236NaGtaAt11AY.530.000288
ORF1ab/nsp13236S236IaGtaTt11AY.60.000041
ORF1ab/nsp13236S236IaGtaTt11AY.630.000387
ORF1ab/nsp13236S236RagTagA11AY.670.000464
ORF1ab/nsp13236S236SagTagC11AY.670.000464
ORF1ab/nsp13236S236delAGT---11AY.670.000464
ORF1ab/nsp13236S236IaGtaTt11AY.7.20.000559
ORF1ab/nsp13236S236IaGtaTt11AY.700.000209
ORF1ab/nsp13236S236delAGT---11AY.720.001361
ORF1ab/nsp13236S236IaGtaTt11AY.740.000116
ORF1ab/nsp13236S236NaGTaAC11AY.750.000056
ORF1ab/nsp13236S236IaGtaTt11AY.75.10.00018
ORF1ab/nsp13236S236IaGtaTt11AY.790.001211
ORF1ab/nsp13236S236GAgtGgt11AY.840.000437
ORF1ab/nsp13236S236VAGtGTt11AY.840.000437
ORF1ab/nsp13236S236IaGtaTt11AY.9.10.000084
ORF1ab/nsp13236S236IaGtaTt11AY.910.00073
ORF1ab/nsp13236S236IaGtaTt11AY.930.000273
ORF1ab/nsp13236S236delAGT---11AY.990.001049
ORF1ab/nsp13236S236IaGtaTt11AZ.20.000821
ORF1ab/nsp13236S236KaGTaAA11B.10.000009
ORF1ab/nsp13236S236TaGtaCt11B.10.000009
ORF1ab/nsp13236S236delAGT---11B.10.000009
ORF1ab/nsp13236S236NaGtaAt11B.10.000009
ORF1ab/nsp13236S236CAgtTgt11B.1.10.000018
ORF1ab/nsp13236S236NaGtaAt11B.1.10.000018
ORF1ab/nsp13236S236FAGtTTt11B.1.10.000018
ORF1ab/nsp13236S236NaGtaAt11B.1.1.1980.001468
ORF1ab/nsp13236S236SagTagC11B.1.1.2160.00089
ORF1ab/nsp13236S236GAgtGgt11B.1.1.2200.001859
ORF1ab/nsp13236S236SagTagC11B.1.1.2220.000204
ORF1ab/nsp13236S236IaGtaTt11B.1.1.2220.000204
ORF1ab/nsp13236S236IaGtaTt11B.1.1.2910.000742
ORF1ab/nsp13236S236IaGtaTt11B.1.1.3180.000302
ORF1ab/nsp13236S236NaGtaAt11B.1.1.390.00051
ORF1ab/nsp13236S236SagTagC11B.1.1.4210.030303
ORF1ab/nsp13236S236IaGtaTt11B.1.1.4250.045455
ORF1ab/nsp13236S236IaGtaTt11B.1.1.5260.003546
ORF1ab/nsp13236S236IaGtaTt11B.1.1.630.000386
ORF1ab/nsp13236S236RAgtCgt11B.1.1.70.000001
ORF1ab/nsp13236S236CAgtTgt11B.1.1.70.000001
ORF1ab/nsp13236S236MaGTaTG11B.1.1.70.000001
ORF1ab/nsp13236S236del2AGT--N11B.1.1.70.000001
ORF1ab/nsp13236S236IaGtaTt11B.1.1.700.000341
ORF1ab/nsp13236S236IaGtaTt11B.1.1120.005181
ORF1ab/nsp13236S236IaGtaTt11B.1.1280.000635
ORF1ab/nsp13236S236IaGtaTt11B.1.1400.018868
ORF1ab/nsp13236S236IaGtaTt11B.1.1570.002985
ORF1ab/nsp13236S236GAgtGgt11B.1.1770.000013
ORF1ab/nsp13236S236RagTagA11B.1.1770.000013
ORF1ab/nsp13236S236IaGtaTt11B.1.177.440.000519
ORF1ab/nsp13236S236GAgtGgt11B.1.177.500.004695
ORF1ab/nsp13236S236IaGtaTt11B.1.177.540.000606
ORF1ab/nsp13236S236IaGtaTt11B.1.177.550.002331
ORF1ab/nsp13236S236NaGtaAt11B.1.177.580.001332
ORF1ab/nsp13236S236IaGtaTt11B.1.177.730.000566
ORF1ab/nsp13236S236delAGT---11B.1.20.000009
ORF1ab/nsp13236S236IaGtaTt11B.1.214.20.0006
ORF1ab/nsp13236S236RagTagA11B.1.258.180.1
ORF1ab/nsp13236S236NaGtaAt11B.1.3110.000275
ORF1ab/nsp13236S236SagTagC11B.1.3110.000275
ORF1ab/nsp13236S236IaGtaTt11B.1.3490.000715
ORF1ab/nsp13236S236IaGtaTt11B.1.36.270.000763
ORF1ab/nsp13236S236IaGtaTt11B.1.3690.000285
ORF1ab/nsp13236S236IaGtaTt11B.1.3800.006623
ORF1ab/nsp13236S236IaGtaTt11B.1.4040.001302
ORF1ab/nsp13236S236GAgtGgt11B.1.4090.000781
ORF1ab/nsp13236S236delAGT---11B.1.4270.00005
ORF1ab/nsp13236S236IaGtaTt11B.1.4280.00102
ORF1ab/nsp13236S236RagTagG11B.1.4290.000024
ORF1ab/nsp13236S236RAgtCgt11B.1.438.10.000107
ORF1ab/nsp13236S236CAgtTgt11B.1.4590.004082
ORF1ab/nsp13236S236IaGtaTt11B.1.4990.00105
ORF1ab/nsp13236S236SagTagC11B.1.5090.000866
ORF1ab/nsp13236S236SagTagC11B.1.5240.001406
ORF1ab/nsp13236S236IaGtaTt11B.1.5250.000113
ORF1ab/nsp13236S236RAgtCgt11B.1.5260.000024
ORF1ab/nsp13236S236NaGtaAt11B.1.5470.02439
ORF1ab/nsp13236S236RAgtCgt11B.1.5510.00129
ORF1ab/nsp13236S236NaGtaAt11B.1.5750.000303
ORF1ab/nsp13236S236IaGtaTt11B.1.5770.000687
ORF1ab/nsp13236S236IaGtaTt11B.1.5950.000261
ORF1ab/nsp13236S236NaGtaAt11B.1.6010.030303
ORF1ab/nsp13236S236IaGtaTt11B.1.6120.002653
ORF1ab/nsp13236S236RagTagA11B.1.617.20.000004
ORF1ab/nsp13236S236del2AGt--t11B.1.617.20.000004
ORF1ab/nsp13236S236SagTagC11B.1.6180.004032
ORF1ab/nsp13236S236GAgtGgt11B.1.6210.000089
ORF1ab/nsp13236S236GAgtGgt11B.1.6230.000536
ORF1ab/nsp13236S236SagTagC11B.1.6290.013333
ORF1ab/nsp13236S236IaGtaTt11B.1.6370.000073
ORF1ab/nsp13236S236GAgtGgt11B.1.6370.000073
ORF1ab/nsp13236S236IaGtaTt11B.1.940.027027
ORF1ab/nsp13236S236IaGtaTt11B.390.002331
ORF1ab/nsp13236S236IaGtaTt11C.370.000116
ORF1ab/nsp13236S236GAgtGgt11D.20.000075
ORF1ab/nsp13236S236IaGtaTt11D.30.005917
ORF1ab/nsp13236S236IaGtaTt11P.1.10.000318
ORF1ab/nsp13236S236IaGtaTt11P.1.120.000484
ORF1ab/nsp13236S236IaGtaTt11P.1.150.000232
ORF1ab/nsp13236S236SagTagC11P.1.40.000977
ORF1ab/nsp13236S236NaGtaAt11P.1.60.001946
ORF1ab/nsp13236S236IaGtaTt11P.30.001595
ORF1ab/nsp13236S236IaGtaTt11Q.40.000455
ORF1ab/nsp13236S236delAGT---11Q.80.000165
ORF1ab/nsp13236S236GAgtGgt11Q.80.000165
ORF1ab/nsp13236S236IaGtaTt11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.