CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 232 | V232V | V5556V | syn | gtA | gtG | 2284 | 2238 | 0.97986 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232V | V5556V | syn | gtA | gtT | 2284 | 43 | 0.0188266 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232V | V5556V | syn | gtA | gtC | 2284 | 3 | 0.00131349 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232I | V5556I | nonsyn | Gta | Ata | 376 | 376 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232E | V5556E | nonsyn | gTa | gAa | 39 | 39 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232L | V5556L | nonsyn | Gta | Cta | 23 | 16 | 0.695652 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232L | V5556L | nonsyn | Gta | Tta | 23 | 6 | 0.26087 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232L | V5556L | nonsyn | GtA | TtG | 23 | 1 | 0.0434783 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del | V5556del | del | GTA | --- | 19 | 19 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232A | V5556A | nonsyn | gTa | gCa | 10 | 9 | 0.9 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232A | V5556A | nonsyn | gTA | gCG | 10 | 1 | 0.1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232P | V5556P | nonsyn | GTa | CCa | 6 | 6 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del1 | V5556del1 | del | Gta | -ta | 5 | 3 | 0.6 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del1 | V5556del1 | del | gtA | gt- | 5 | 2 | 0.4 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232K | V5556K | nonsyn | GTa | AAa | 4 | 4 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232S | V5556S | nonsyn | GTa | TCa | 4 | 3 | 0.75 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232S | V5556S | nonsyn | GTA | TCG | 4 | 1 | 0.25 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232T | V5556T | nonsyn | GTa | ACa | 3 | 2 | 0.666667 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del2 | V5556del2 | del | GTA | --T | 3 | 1 | 0.333333 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del2 | V5556del2 | del | gTA | g-- | 3 | 1 | 0.333333 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232del2 | V5556del2 | del | GTa | --a | 3 | 1 | 0.333333 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232T | V5556T | nonsyn | GTA | ACG | 3 | 1 | 0.333333 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232F | V5556F | nonsyn | GtA | TtT | 1 | 1 | 1 | 16930-16932 |
ORF1ab/nsp13 | 232 | V232M | V5556M | nonsyn | GtA | AtG | 1 | 1 | 1 | 16930-16932 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2238 | 2284 | All | 0.000428 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 43 | 2284 | All | 0.000008 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtC | 3 | 2284 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1903 | 1905 | B.1.1.176 | 0.836116 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 1905 | B.1.1.176 | 0.000879 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 376 | 376 | All | 0.000072 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 160 | 160 | AY.46 | 0.016653 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 109 | 116 | B.1.1.7 | 0.000098 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 6 | 116 | B.1.1.7 | 0.000005 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtC | 1 | 116 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 99 | 99 | B.1.177 | 0.001304 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 78 | 78 | AY.68 | 0.021352 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 48 | 48 | P.1.17 | 0.007764 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 39 | 39 | All | 0.000007 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 31 | 31 | B.1.621 | 0.002744 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 14 | 24 | B.1.617.2 | 0.000053 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 10 | 24 | B.1.617.2 | 0.000038 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 16 | 23 | All | 0.000003 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 6 | 23 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232L | GtA | TtG | 1 | 23 | All | 0 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 19 | 19 | All | 0.000004 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 19 | 19 | AY.85 | 0.008116 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 16 | 16 | AY.100 | 0.000736 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 16 | 16 | AY.99 | 0.016789 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 11 | 11 | AY.118 | 0.000689 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 9 | 11 | AY.4 | 0.000014 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 11 | AY.4 | 0.000003 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 9 | 10 | All | 0.000002 |
ORF1ab/nsp13 | 232 | V232A | gTA | gCG | 1 | 10 | All | 0 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 7 | 7 | AS.1 | 0.066667 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp13 | 232 | V232P | GTa | CCa | 6 | 6 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 6 | 6 | AY.30 | 0.002374 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 4 | 6 | B.1 | 0.000037 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 6 | B.1 | 0.000018 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp13 | 232 | V232del1 | Gta | -ta | 3 | 5 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232del1 | gtA | gt- | 2 | 5 | All | 0 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp13 | 232 | V232K | GTa | AAa | 4 | 4 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232S | GTa | TCa | 3 | 4 | All | 0.000001 |
ORF1ab/nsp13 | 232 | V232S | GTA | TCG | 1 | 4 | All | 0 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp13 | 232 | V232K | GTa | AAa | 4 | 4 | AY.85 | 0.001709 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 3 | 0.111111 | |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 3 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232T | GTa | ACa | 2 | 3 | All | 0 |
ORF1ab/nsp13 | 232 | V232del2 | GTa | --a | 1 | 3 | All | 0 |
ORF1ab/nsp13 | 232 | V232T | GTA | ACG | 1 | 3 | All | 0 |
ORF1ab/nsp13 | 232 | V232del2 | gTA | g-- | 1 | 3 | All | 0 |
ORF1ab/nsp13 | 232 | V232del2 | GTA | --T | 1 | 3 | All | 0 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 3 | AY.103 | 0.000012 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 3 | AY.103 | 0.000006 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 3 | AY.44 | 0.000012 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 3 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp13 | 232 | V232del1 | Gta | -ta | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232L | GtA | TtG | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232S | GTA | TCG | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232A | gTA | gCG | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232T | GTA | ACG | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232S | GTa | TCa | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232T | GTa | ACa | 1 | 2 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232P | GTa | CCa | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 2 | AY.119 | 0.000035 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 2 | AY.119 | 0.000035 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp13 | 232 | V232del1 | Gta | -ta | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 232 | V232del1 | gtA | gt- | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtC | 1 | 2 | B.1.526 | 0.000024 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 2 | B.1.526 | 0.000024 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp13 | 232 | V232P | GTa | CCa | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp13 | 232 | V232M | GtA | AtG | 1 | 1 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | 0.055556 | |
ORF1ab/nsp13 | 232 | V232M | GtA | AtG | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 232 | V232F | GtA | TtT | 1 | 1 | All | 0 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp13 | 232 | V232F | GtA | TtT | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 232 | V232del2 | GTA | --T | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp13 | 232 | V232T | GTa | ACa | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 232 | V232S | GTa | TCa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp13 | 232 | V232del2 | gTA | g-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 232 | V232del2 | GTa | --a | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp13 | 232 | V232S | GTa | TCa | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtC | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtG | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp13 | 232 | V232del | GTA | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp13 | 232 | V232del1 | gtA | gt- | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp13 | 232 | V232V | gtA | gtT | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp13 | 232 | V232E | gTa | gAa | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp13 | 232 | V232P | GTa | CCa | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp13 | 232 | V232P | GTa | CCa | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 232 | V232L | Gta | Cta | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 232 | V232A | gTa | gCa | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp13 | 232 | V232L | Gta | Tta | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp13 | 232 | V232I | Gta | Ata | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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