CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 218

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13218K218RK5542RnonsynaAaaGa37911379090.99994716888-16890
ORF1ab/nsp13218K218RK5542RnonsynaAAaGG3791120.000052755116888-16890
ORF1ab/nsp13218K218KK5542KsynaaAaaG414414116888-16890
ORF1ab/nsp13218K218delK5542deldelAAA---3434116888-16890
ORF1ab/nsp13218K218NK5542NnonsynaaAaaT870.87516888-16890
ORF1ab/nsp13218K218XK5542XnonsynAaaTaa870.87516888-16890
ORF1ab/nsp13218K218NK5542NnonsynaaAaaC810.12516888-16890
ORF1ab/nsp13218K218XK5542XnonsynAAaTGa810.12516888-16890
ORF1ab/nsp13218K218EK5542EnonsynAaaGaa750.71428616888-16890
ORF1ab/nsp13218K218EK5542EnonsynAaAGaG720.28571416888-16890
ORF1ab/nsp13218K218SK5542SnonsynaAAaGT420.516888-16890
ORF1ab/nsp13218K218SK5542SnonsynAAaTCa420.516888-16890
ORF1ab/nsp13218K218IK5542InonsynaAaaTa33116888-16890
ORF1ab/nsp13218K218QK5542QnonsynAaACaG320.66666716888-16890
ORF1ab/nsp13218K218QK5542QnonsynAaaCaa310.33333316888-16890
ORF1ab/nsp13218K218HK5542HnonsynAaACaT22116888-16890
ORF1ab/nsp13218K218del1K5542del1delAaa-aa11116888-16890
ORF1ab/nsp13218K218del2K5542del2delaAAa--11116888-16890

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13218K218RaAaaGa3790937911All0.007251
ORF1ab/nsp13218K218RaAAaGG237911All0
ORF1ab/nsp13218K218RaAaaGa2973429735B.1.1600.927333
ORF1ab/nsp13218K218RaAAaGG129735B.1.1600.000031
ORF1ab/nsp13218K218RaAaaGa10601060B.1.160.160.98513
ORF1ab/nsp13218K218RaAaaGa776776B.1.160.81
ORF1ab/nsp13218K218RaAaaGa588588B.1.160.171
ORF1ab/nsp13218K218RaAaaGa503503AY.40.000783
ORF1ab/nsp13218K218RaAaaGa481481B.1.160.71
ORF1ab/nsp13218K218RaAaaGa471471B.1.160.140.997881
ORF1ab/nsp13218K218KaaAaaG414414All0.000079
ORF1ab/nsp13218K218RaAaaGa409409B.1.160.260.990315
ORF1ab/nsp13218K218RaAaaGa340340B.1.160.280.994152
ORF1ab/nsp13218K218RaAaaGa237237B.1.160.291
ORF1ab/nsp13218K218RaAaaGa226226B.1.160.331
ORF1ab/nsp13218K218RaAaaGa224224B.1.160.240.99115
ORF1ab/nsp13218K218RaAaaGa207207B.1.160.231
ORF1ab/nsp13218K218RaAaaGa205205B.1.160.300.610119
ORF1ab/nsp13218K218RaAaaGa202202B.1.160.151
ORF1ab/nsp13218K218RaAaaGa189189B.1.160.320.811159
ORF1ab/nsp13218K218RaAaaGa185185B.10.001695
ORF1ab/nsp13218K218RaAaaGa175175B.1.160.111
ORF1ab/nsp13218K218RaAaaGa156156B.1.160.121
ORF1ab/nsp13218K218RaAaaGa148149B.1.160.221
ORF1ab/nsp13218K218RaAAaGG1149B.1.160.220.006757
ORF1ab/nsp13218K218RaAaaGa139139B.1.160.91
ORF1ab/nsp13218K218RaAaaGa137137B.1.160.181
ORF1ab/nsp13218K218RaAaaGa122122AB.11
ORF1ab/nsp13218K218RaAaaGa122122B.1.160.310.983871
ORF1ab/nsp13218K218RaAaaGa118118B.1.160.100.951613
ORF1ab/nsp13218K218KaaAaaG9797B.1.617.20.000365
ORF1ab/nsp13218K218RaAaaGa9090B.1.160.251
ORF1ab/nsp13218K218RaAaaGa8282B.1.160.200.732143
ORF1ab/nsp13218K218RaAaaGa6666B.1.160.271
ORF1ab/nsp13218K218RaAaaGa6363B.1.1770.00083
ORF1ab/nsp13218K218RaAaaGa5252B.1.2210.003694
ORF1ab/nsp13218K218RaAaaGa4949B.1.160.211
ORF1ab/nsp13218K218KaaAaaG4545AY.40.00007
ORF1ab/nsp13218K218KaaAaaG4242B.1.5260.000987
ORF1ab/nsp13218K218RaAaaGa4040B.1.10.000726
ORF1ab/nsp13218K218RaAaaGa3636B.1.160.131
ORF1ab/nsp13218K218delAAA---3434All0.000007
ORF1ab/nsp13218K218RaAaaGa3232B.1.177.440.016606
ORF1ab/nsp13218K218KaaAaaG2929AY.1170.002451
ORF1ab/nsp13218K218RaAaaGa2828B.1.160.191
ORF1ab/nsp13218K218RaAaaGa2727B.1.1.4451
ORF1ab/nsp13218K218RaAaaGa2525B.1.258.110.009909
ORF1ab/nsp13218K218KaaAaaG2424B.1.1.70.000021
ORF1ab/nsp13218K218RaAaaGa2222B.1.1.390.011213
ORF1ab/nsp13218K218KaaAaaG2121AY.430.000093
ORF1ab/nsp13218K218KaaAaaG1818B.1.4290.000424
ORF1ab/nsp13218K218RaAaaGa1515B.1.1.70.000013
ORF1ab/nsp13218K218delAAA---1212B.1.1.70.000011
ORF1ab/nsp13218K218RaAaaGa1212B.1.177.430.017725
ORF1ab/nsp13218K218KaaAaaG1111AY.1020.000292
ORF1ab/nsp13218K218RaAaaGa1111B.1.617.20.000041
ORF1ab/nsp13218K218RaAaaGa1010B.1.177.730.005663
ORF1ab/nsp13218K218NaaAaaT78All0.000001
ORF1ab/nsp13218K218XAaaTaa78All0.000001
ORF1ab/nsp13218K218NaaAaaC18All0
ORF1ab/nsp13218K218XAAaTGa18All0
ORF1ab/nsp13218K218KaaAaaG88AY.1030.00005
ORF1ab/nsp13218K218KaaAaaG88B.1.6370.000585
ORF1ab/nsp13218K218KaaAaaG88P.10.000126
ORF1ab/nsp13218K218EAaaGaa57All0.000001
ORF1ab/nsp13218K218EAaAGaG27All0
ORF1ab/nsp13218K218KaaAaaG77AY.250.000042
ORF1ab/nsp13218K218KaaAaaG77AY.330.000467
ORF1ab/nsp13218K218KaaAaaG66B.1.177.70.000989
ORF1ab/nsp13218K218RaAaaGa66B.1.5090.005195
ORF1ab/nsp13218K218KaaAaaG55AY.390.000124
ORF1ab/nsp13218K218RaAaaGa55B0.000639
ORF1ab/nsp13218K218RaAaaGa55B.1.2580.000333
ORF1ab/nsp13218K218SAAaTCa24All0
ORF1ab/nsp13218K218SaAAaGT24All0
ORF1ab/nsp13218K218KaaAaaG44B.10.000037
ORF1ab/nsp13218K218KaaAaaG44B.1.1.2140.000222
ORF1ab/nsp13218K218RaAaaGa44B.1.1.700.001364
ORF1ab/nsp13218K218RaAaaGa44B.1.177.310.045977
ORF1ab/nsp13218K218RaAaaGa44B.1.177.750.004162
ORF1ab/nsp13218K218RaAaaGa44B.1.177.810.000757
ORF1ab/nsp13218K218RaAaaGa44B.1.4730.076923
ORF1ab/nsp13218K218KaaAaaG44B.1.4970.001259
ORF1ab/nsp13218K218KaaAaaG44B.1.6210.000354
ORF1ab/nsp13218K218KaaAaaG330.166667
ORF1ab/nsp13218K218IaAaaTa33All0.000001
ORF1ab/nsp13218K218QAaACaG23All0
ORF1ab/nsp13218K218QAaaCaa13All0
ORF1ab/nsp13218K218delAAA---33AY.40.000005
ORF1ab/nsp13218K218KaaAaaG33AY.440.000018
ORF1ab/nsp13218K218KaaAaaG33AY.460.000312
ORF1ab/nsp13218K218RaAaaGa33B.1.1.370.000579
ORF1ab/nsp13218K218RaAaaGa33B.1.20.000026
ORF1ab/nsp13218K218KaaAaaG33B.1.2210.000213
ORF1ab/nsp13218K218RaAaaGa33B.1.360.000438
ORF1ab/nsp13218K218RaAaaGa33B.1.36.10.003421
ORF1ab/nsp13218K218RaAaaGa33B.1.36.290.001552
ORF1ab/nsp13218K218RaAaaGa33B.1.5330.028846
ORF1ab/nsp13218K218SAAaTCa220.111111
ORF1ab/nsp13218K218HAaACaT220.111111
ORF1ab/nsp13218K218IaAaaTa220.111111
ORF1ab/nsp13218K218NaaAaaT220.111111
ORF1ab/nsp13218K218XAaaTaa220.111111
ORF1ab/nsp13218K218QAaACaG220.111111
ORF1ab/nsp13218K218EAaaGaa120.055556
ORF1ab/nsp13218K218EAaAGaG120.055556
ORF1ab/nsp13218K218HAaACaT22All0
ORF1ab/nsp13218K218KaaAaaG22AY.116.10.000623
ORF1ab/nsp13218K218KaaAaaG22AY.230.000139
ORF1ab/nsp13218K218KaaAaaG22AY.240.000862
ORF1ab/nsp13218K218KaaAaaG22AY.290.000032
ORF1ab/nsp13218K218RaAaaGa22AY.390.000049
ORF1ab/nsp13218K218RaAaaGa22AY.50.000041
ORF1ab/nsp13218K218KaaAaaG22AY.50.000041
ORF1ab/nsp13218K218delAAA---22AY.670.000929
ORF1ab/nsp13218K218KaaAaaG22AY.700.000417
ORF1ab/nsp13218K218KaaAaaG22AY.98.10.000097
ORF1ab/nsp13218K218delAAA---22B.10.000018
ORF1ab/nsp13218K218KaaAaaG22B.1.10.000036
ORF1ab/nsp13218K218EAaaGaa12B.1.10.000018
ORF1ab/nsp13218K218EAaAGaG12B.1.10.000018
ORF1ab/nsp13218K218RaAaaGa22B.1.1.4200.002012
ORF1ab/nsp13218K218KaaAaaG22B.1.1770.000026
ORF1ab/nsp13218K218KaaAaaG22B.1.20.000018
ORF1ab/nsp13218K218RaAaaGa22B.1.416.10.003125
ORF1ab/nsp13218K218KaaAaaG22C.370.000232
ORF1ab/nsp13218K218RaAaaGa11A.20.000662
ORF1ab/nsp13218K218RaAaaGa11AF.10.037037
ORF1ab/nsp13218K218del1Aaa-aa11All0
ORF1ab/nsp13218K218del2aAAa--11All0
ORF1ab/nsp13218K218RaAaaGa11AP.10.001502
ORF1ab/nsp13218K218RaAaaGa11AY.1020.000027
ORF1ab/nsp13218K218KaaAaaG11AY.1040.001984
ORF1ab/nsp13218K218KaaAaaG11AY.1060.000335
ORF1ab/nsp13218K218delAAA---11AY.1080.001103
ORF1ab/nsp13218K218KaaAaaG11AY.1190.000035
ORF1ab/nsp13218K218RaAaaGa11AY.1200.000037
ORF1ab/nsp13218K218delAAA---11AY.1200.000037
ORF1ab/nsp13218K218delAAA---11AY.190.00114
ORF1ab/nsp13218K218XAaaTaa11AY.250.000006
ORF1ab/nsp13218K218RaAaaGa11AY.250.000006
ORF1ab/nsp13218K218RaAaaGa11AY.260.000028
ORF1ab/nsp13218K218KaaAaaG11AY.360.000148
ORF1ab/nsp13218K218EAaaGaa11AY.40.000002
ORF1ab/nsp13218K218XAAaTGa11AY.430.000004
ORF1ab/nsp13218K218delAAA---11AY.430.000004
ORF1ab/nsp13218K218NaaAaaT11AY.430.000004
ORF1ab/nsp13218K218RaAaaGa11AY.430.000004
ORF1ab/nsp13218K218SaAAaGT11AY.440.000006
ORF1ab/nsp13218K218KaaAaaG11AY.450.000122
ORF1ab/nsp13218K218KaaAaaG11AY.470.000031
ORF1ab/nsp13218K218KaaAaaG11AY.5.40.000277
ORF1ab/nsp13218K218KaaAaaG11AY.540.000095
ORF1ab/nsp13218K218KaaAaaG11AY.60.000041
ORF1ab/nsp13218K218KaaAaaG11AY.640.000595
ORF1ab/nsp13218K218delAAA---11AY.680.000274
ORF1ab/nsp13218K218delAAA---11AY.720.001361
ORF1ab/nsp13218K218delAAA---11AY.750.000056
ORF1ab/nsp13218K218KaaAaaG11AY.750.000056
ORF1ab/nsp13218K218EAaaGaa11AY.850.000427
ORF1ab/nsp13218K218delAAA---11AY.90.000068
ORF1ab/nsp13218K218KaaAaaG11AY.9.20.000037
ORF1ab/nsp13218K218RaAaaGa11AY.940.000443
ORF1ab/nsp13218K218XAaaTaa11AY.980.000079
ORF1ab/nsp13218K218SaAAaGT11AY.990.001049
ORF1ab/nsp13218K218XAaaTaa11B.10.000009
ORF1ab/nsp13218K218XAaaTaa11B.1.10.000018
ORF1ab/nsp13218K218RaAaaGa11B.1.1.1530.001095
ORF1ab/nsp13218K218RaAaaGa11B.1.1.1700.001247
ORF1ab/nsp13218K218RaAaaGa11B.1.1.1890.001513
ORF1ab/nsp13218K218KaaAaaG11B.1.1.2220.000204
ORF1ab/nsp13218K218RaAaaGa11B.1.1.2360.006897
ORF1ab/nsp13218K218KaaAaaG11B.1.1.3060.000438
ORF1ab/nsp13218K218KaaAaaG11B.1.1.330.000421
ORF1ab/nsp13218K218KaaAaaG11B.1.1.4480.002033
ORF1ab/nsp13218K218RaAaaGa11B.1.1.4870.005587
ORF1ab/nsp13218K218RaAaaGa11B.1.1.5250.005464
ORF1ab/nsp13218K218QAaaCaa11B.1.1.70.000001
ORF1ab/nsp13218K218XAaaTaa11B.1.1.70.000001
ORF1ab/nsp13218K218NaaAaaT11B.1.1770.000013
ORF1ab/nsp13218K218delAAA---11B.1.1770.000013
ORF1ab/nsp13218K218RaAaaGa11B.1.177.160.000664
ORF1ab/nsp13218K218RaAaaGa11B.1.177.200.001517
ORF1ab/nsp13218K218RaAaaGa11B.1.177.230.003236
ORF1ab/nsp13218K218RaAaaGa11B.1.177.40.000211
ORF1ab/nsp13218K218RaAaaGa11B.1.177.620.001192
ORF1ab/nsp13218K218delAAA---11B.1.177.630.002703
ORF1ab/nsp13218K218del1Aaa-aa11B.1.177.730.000566
ORF1ab/nsp13218K218KaaAaaG11B.1.177.80.000752
ORF1ab/nsp13218K218delAAA---11B.1.177.90.001332
ORF1ab/nsp13218K218delAAA---11B.1.20.000009
ORF1ab/nsp13218K218del2aAAa--11B.1.20.000009
ORF1ab/nsp13218K218NaaAaaT11B.1.20.000009
ORF1ab/nsp13218K218KaaAaaG11B.1.2270.047619
ORF1ab/nsp13218K218RaAaaGa11B.1.2360.002053
ORF1ab/nsp13218K218RaAaaGa11B.1.258.170.000104
ORF1ab/nsp13218K218RaAaaGa11B.1.2680.010417
ORF1ab/nsp13218K218RaAaaGa11B.1.3260.007576
ORF1ab/nsp13218K218KaaAaaG11B.1.3410.022727
ORF1ab/nsp13218K218KaaAaaG11B.1.3460.001311
ORF1ab/nsp13218K218KaaAaaG11B.1.3510.00003
ORF1ab/nsp13218K218KaaAaaG11B.1.351.20.000303
ORF1ab/nsp13218K218KaaAaaG11B.1.360.000146
ORF1ab/nsp13218K218KaaAaaG11B.1.36.180.00042
ORF1ab/nsp13218K218RaAaaGa11B.1.36.80.001
ORF1ab/nsp13218K218RaAaaGa11B.1.3890.001002
ORF1ab/nsp13218K218delAAA---11B.1.4270.00005
ORF1ab/nsp13218K218NaaAaaT11B.1.4290.000024
ORF1ab/nsp13218K218RaAaaGa11B.1.4600.017857
ORF1ab/nsp13218K218RaAaaGa11B.1.4740.001901
ORF1ab/nsp13218K218KaaAaaG11B.1.4990.00105
ORF1ab/nsp13218K218RaAaaGa11B.1.5260.000024
ORF1ab/nsp13218K218NaaAaaC11B.1.5610.000397
ORF1ab/nsp13218K218KaaAaaG11B.1.5750.000303
ORF1ab/nsp13218K218RaAaaGa11B.1.5810.009434
ORF1ab/nsp13218K218KaaAaaG11B.1.5960.000087
ORF1ab/nsp13218K218RaAaaGa11B.1.6090.000479
ORF1ab/nsp13218K218IaAaaTa11B.1.6120.002653
ORF1ab/nsp13218K218delAAA---11B.1.617.20.000004
ORF1ab/nsp13218K218delAAA---11C.170.055556
ORF1ab/nsp13218K218RaAaaGa11L.30.003546
ORF1ab/nsp13218K218NaaAaaT11P.10.000016
ORF1ab/nsp13218K218KaaAaaG11P.1.150.000232
ORF1ab/nsp13218K218RaAaaGa11Q.40.000455
ORF1ab/nsp13218K218EAaaGaa11Q.80.000165