CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 207

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13207D207DD5531DsyngaTgaC33023302116855-16857
ORF1ab/nsp13207D207GD5531GnonsyngAtgGt269269116855-16857
ORF1ab/nsp13207D207YD5531YnonsynGatTat1851840.99459516855-16857
ORF1ab/nsp13207D207YD5531YnonsynGaTTaC18510.0054054116855-16857
ORF1ab/nsp13207D207delD5531deldelGAT---7676116855-16857
ORF1ab/nsp13207D207ED5531EnonsyngaTgaA72580.80555616855-16857
ORF1ab/nsp13207D207ED5531EnonsyngaTgaG72140.19444416855-16857
ORF1ab/nsp13207D207ND5531NnonsynGatAat26250.96153816855-16857
ORF1ab/nsp13207D207ND5531NnonsynGaTAaC2610.038461516855-16857
ORF1ab/nsp13207D207HD5531HnonsynGatCat1111116855-16857
ORF1ab/nsp13207D207AD5531AnonsyngAtgCt870.87516855-16857
ORF1ab/nsp13207D207AD5531AnonsyngATgCC810.12516855-16857
ORF1ab/nsp13207D207CD5531CnonsynGAtTGt77116855-16857
ORF1ab/nsp13207D207VD5531VnonsyngAtgTt33116855-16857
ORF1ab/nsp13207D207del1D5531del1delGat-at22116855-16857
ORF1ab/nsp13207D207del2D5531del2delGAt--t11116855-16857
ORF1ab/nsp13207D207LD5531LnonsynGATTTA11116855-16857
ORF1ab/nsp13207D207QD5531QnonsynGaTCaG11116855-16857
ORF1ab/nsp13207D207SD5531SnonsynGAtAGt11116855-16857

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13207D207DgaTgaC33023302All0.000632
ORF1ab/nsp13207D207DgaTgaC19431943A.2.50.969561
ORF1ab/nsp13207D207DgaTgaC629629A.2.5.20.988994
ORF1ab/nsp13207D207GgAtgGt269269All0.000051
ORF1ab/nsp13207D207DgaTgaC207207A.2.5.10.995192
ORF1ab/nsp13207D207YGatTat184185All0.000035
ORF1ab/nsp13207D207YGaTTaC1185All0
ORF1ab/nsp13207D207DgaTgaC117117B.1.177.650.077844
ORF1ab/nsp13207D207DgaTgaC9696A.2.5.30.989691
ORF1ab/nsp13207D207GgAtgGt8686B.1.1.70.000077
ORF1ab/nsp13207D207delGAT---7676All0.000015
ORF1ab/nsp13207D207EgaTgaA5872All0.000011
ORF1ab/nsp13207D207EgaTgaG1472All0.000003
ORF1ab/nsp13207D207DgaTgaC6161B.1.1.70.000055
ORF1ab/nsp13207D207YGatTat4949B.1.1.70.000044
ORF1ab/nsp13207D207DgaTgaC4747AY.440.000286
ORF1ab/nsp13207D207GgAtgGt3737AY.250.000223
ORF1ab/nsp13207D207DgaTgaC3333B.1.2580.002196
ORF1ab/nsp13207D207DgaTgaC2828AY.40.000044
ORF1ab/nsp13207D207NGatAat2526All0.000005
ORF1ab/nsp13207D207NGaTAaC126All0
ORF1ab/nsp13207D207YGatTat2626B.1.6370.0019
ORF1ab/nsp13207D207DgaTgaC2525AY.430.000111
ORF1ab/nsp13207D207delGAT---2121B.1.1.70.000019
ORF1ab/nsp13207D207YGatTat1616AY.40.000025
ORF1ab/nsp13207D207GgAtgGt1414AY.40.000022
ORF1ab/nsp13207D207HGatCat1111All0.000002
ORF1ab/nsp13207D207YGatTat1111B.10.000101
ORF1ab/nsp13207D207GgAtgGt1111B.1.617.20.000041
ORF1ab/nsp13207D207EgaTgaA1010AY.880.008842
ORF1ab/nsp13207D207YGatTat1010B.1.617.20.000038
ORF1ab/nsp13207D207GgAtgGt99AY.1030.000056
ORF1ab/nsp13207D207YGatTat99AY.430.00004
ORF1ab/nsp13207D207DgaTgaC99B.1.1770.000119
ORF1ab/nsp13207D207AgAtgCt78All0.000001
ORF1ab/nsp13207D207AgATgCC18All0
ORF1ab/nsp13207D207GgAtgGt88AY.430.000035
ORF1ab/nsp13207D207YGatTat88B.1.10.000145
ORF1ab/nsp13207D207EgaTgaA58B.1.1.70.000004
ORF1ab/nsp13207D207EgaTgaG38B.1.1.70.000003
ORF1ab/nsp13207D207DgaTgaC88B.1.617.20.00003
ORF1ab/nsp13207D207CGAtTGt77All0.000001
ORF1ab/nsp13207D207EgaTgaA77AY.260.000198
ORF1ab/nsp13207D207GgAtgGt77B.1.20.000062
ORF1ab/nsp13207D207EgaTgaG57B.1.20.000044
ORF1ab/nsp13207D207EgaTgaA27B.1.20.000018
ORF1ab/nsp13207D207GgAtgGt77P.10.00011
ORF1ab/nsp13207D207delGAT---660.333333
ORF1ab/nsp13207D207NGatAat66AY.1020.000159
ORF1ab/nsp13207D207DgaTgaC66B.1.10.000109
ORF1ab/nsp13207D207GgAtgGt66B.1.1770.000079
ORF1ab/nsp13207D207delGAT---55AY.250.00003
ORF1ab/nsp13207D207GgAtgGt55AY.30.00005
ORF1ab/nsp13207D207GgAtgGt55AY.390.000124
ORF1ab/nsp13207D207delGAT---55AY.40.000008
ORF1ab/nsp13207D207DgaTgaC55B.10.000046
ORF1ab/nsp13207D207EgaTgaA55B.10.000046
ORF1ab/nsp13207D207DgaTgaC55B.1.1.630.001929
ORF1ab/nsp13207D207YGatTat44AY.1030.000025
ORF1ab/nsp13207D207DgaTgaC44AY.260.000113
ORF1ab/nsp13207D207EgaTgaA44AY.40.000006
ORF1ab/nsp13207D207GgAtgGt44AY.440.000024
ORF1ab/nsp13207D207GgAtgGt44B.10.000037
ORF1ab/nsp13207D207GgAtgGt44B.1.10.000073
ORF1ab/nsp13207D207DgaTgaC44B.1.1.5190.000159
ORF1ab/nsp13207D207DgaTgaC44B.1.2390.004884
ORF1ab/nsp13207D207EgaTgaA44B.1.36.210.008639
ORF1ab/nsp13207D207GgAtgGt44B.1.3810.03125
ORF1ab/nsp13207D207DgaTgaC44B.1.466.20.001565
ORF1ab/nsp13207D207NGatAat44B.1.617.20.000015
ORF1ab/nsp13207D207VgAtgTt33All0.000001
ORF1ab/nsp13207D207DgaTgaC33AY.1030.000019
ORF1ab/nsp13207D207DgaTgaC33AY.140.000264
ORF1ab/nsp13207D207DgaTgaC33AY.250.000018
ORF1ab/nsp13207D207CGAtTGt33AY.250.000018
ORF1ab/nsp13207D207YGatTat33AY.290.000047
ORF1ab/nsp13207D207DgaTgaC33AY.30.00003
ORF1ab/nsp13207D207NGatAat33AY.470.000093
ORF1ab/nsp13207D207delGAT---33B.10.000027
ORF1ab/nsp13207D207AgAtgCt33B.1.1.70.000003
ORF1ab/nsp13207D207YGatTat33B.1.1770.00004
ORF1ab/nsp13207D207DgaTgaC33B.1.20.000026
ORF1ab/nsp13207D207DgaTgaC33B.1.2340.000396
ORF1ab/nsp13207D207DgaTgaC33B.1.2430.000209
ORF1ab/nsp13207D207GgAtgGt33B.1.3510.000089
ORF1ab/nsp13207D207GgAtgGt33B.1.36.290.001552
ORF1ab/nsp13207D207delGAT---33B.1.4270.000151
ORF1ab/nsp13207D207EgaTgaA33B.1.6090.001438
ORF1ab/nsp13207D207delGAT---33B.1.617.20.000011
ORF1ab/nsp13207D207DgaTgaC33B.1.6180.012097
ORF1ab/nsp13207D207YGatTat220.111111
ORF1ab/nsp13207D207HGatCat220.111111
ORF1ab/nsp13207D207GgAtgGt22A.50.003846
ORF1ab/nsp13207D207del1Gat-at22All0
ORF1ab/nsp13207D207DgaTgaC22AY.1000.000092
ORF1ab/nsp13207D207YGatTat22AY.1020.000053
ORF1ab/nsp13207D207GgAtgGt22AY.1020.000053
ORF1ab/nsp13207D207EgaTgaA22AY.1030.000012
ORF1ab/nsp13207D207delGAT---22AY.1080.002205
ORF1ab/nsp13207D207DgaTgaC22AY.1190.000071
ORF1ab/nsp13207D207DgaTgaC22AY.1200.000074
ORF1ab/nsp13207D207YGatTat22AY.250.000012
ORF1ab/nsp13207D207GgAtgGt22AY.290.000032
ORF1ab/nsp13207D207DgaTgaC22AY.290.000032
ORF1ab/nsp13207D207YGatTat22AY.3.10.000171
ORF1ab/nsp13207D207delGAT---22AY.430.000009
ORF1ab/nsp13207D207HGatCat22AY.430.000009
ORF1ab/nsp13207D207GgAtgGt22AY.470.000062
ORF1ab/nsp13207D207EgaTgaA22AY.50.000041
ORF1ab/nsp13207D207delGAT---22AY.670.000929
ORF1ab/nsp13207D207YGatTat22AY.700.000417
ORF1ab/nsp13207D207GgAtgGt22AY.750.000112
ORF1ab/nsp13207D207GgAtgGt22AZ.30.00304
ORF1ab/nsp13207D207NGatAat22B.10.000018
ORF1ab/nsp13207D207GgAtgGt22B.1.1.2070.002364
ORF1ab/nsp13207D207GgAtgGt22B.1.1.2140.000111
ORF1ab/nsp13207D207GgAtgGt22B.1.1.2940.002532
ORF1ab/nsp13207D207EgaTgaG22B.1.1.3550.030769
ORF1ab/nsp13207D207VgAtgTt22B.1.1.70.000002
ORF1ab/nsp13207D207AgAtgCt22B.1.160.310.016129
ORF1ab/nsp13207D207delGAT---22B.1.20.000018
ORF1ab/nsp13207D207YGatTat22B.1.20.000018
ORF1ab/nsp13207D207DgaTgaC22B.1.2210.000142
ORF1ab/nsp13207D207EgaTgaA22B.1.2400.000431
ORF1ab/nsp13207D207GgAtgGt22B.1.2890.005319
ORF1ab/nsp13207D207delGAT---22B.1.4290.000047
ORF1ab/nsp13207D207EgaTgaA22B.1.617.10.000258
ORF1ab/nsp13207D207EgaTgaA22B.1.617.20.000008
ORF1ab/nsp13207D207DgaTgaC22B.40.004415
ORF1ab/nsp13207D207YGatTat22D.20.00015
ORF1ab/nsp13207D207DgaTgaC22P.1.150.000465
ORF1ab/nsp13207D207YGatTat22Q.30.00029
ORF1ab/nsp13207D207DgaTgaC11A0.000387
ORF1ab/nsp13207D207DgaTgaC11A.10.000282
ORF1ab/nsp13207D207DgaTgaC11A.2.40.003367
ORF1ab/nsp13207D207NGatAat11A.50.001923
ORF1ab/nsp13207D207del2GAt--t11All0
ORF1ab/nsp13207D207LGATTTA11All0
ORF1ab/nsp13207D207SGAtAGt11All0
ORF1ab/nsp13207D207QGaTCaG11All0
ORF1ab/nsp13207D207DgaTgaC11AY.1020.000027
ORF1ab/nsp13207D207YGatTat11AY.1060.000335
ORF1ab/nsp13207D207GgAtgGt11AY.1110.000183
ORF1ab/nsp13207D207GgAtgGt11AY.1160.000287
ORF1ab/nsp13207D207YGatTat11AY.1180.000063
ORF1ab/nsp13207D207GgAtgGt11AY.1190.000035
ORF1ab/nsp13207D207delGAT---11AY.1200.000037
ORF1ab/nsp13207D207delGAT---11AY.190.00114
ORF1ab/nsp13207D207YGatTat11AY.200.000039
ORF1ab/nsp13207D207GgAtgGt11AY.230.00007
ORF1ab/nsp13207D207DgaTgaC11AY.230.00007
ORF1ab/nsp13207D207YGatTat11AY.260.000028
ORF1ab/nsp13207D207DgaTgaC11AY.270.000065
ORF1ab/nsp13207D207GgAtgGt11AY.280.00189
ORF1ab/nsp13207D207YGatTat11AY.30.00001
ORF1ab/nsp13207D207CGAtTGt11AY.30.00001
ORF1ab/nsp13207D207delGAT---11AY.30.00001
ORF1ab/nsp13207D207GgAtgGt11AY.330.000067
ORF1ab/nsp13207D207DgaTgaC11AY.34.10.00051
ORF1ab/nsp13207D207LGATTTA11AY.370.000316
ORF1ab/nsp13207D207DgaTgaC11AY.390.000025
ORF1ab/nsp13207D207CGAtTGt11AY.39.10.00004
ORF1ab/nsp13207D207GgAtgGt11AY.39.20.001541
ORF1ab/nsp13207D207HGatCat11AY.40.000002
ORF1ab/nsp13207D207CGAtTGt11AY.40.000002
ORF1ab/nsp13207D207QGaTCaG11AY.40.000002
ORF1ab/nsp13207D207NGatAat11AY.40.000002
ORF1ab/nsp13207D207delGAT---11AY.4.20.000022
ORF1ab/nsp13207D207EgaTgaA11AY.4.20.000022
ORF1ab/nsp13207D207delGAT---11AY.4.50.000107
ORF1ab/nsp13207D207EgaTgaA11AY.430.000004
ORF1ab/nsp13207D207delGAT---11AY.440.000006
ORF1ab/nsp13207D207HGatCat11AY.46.20.000635
ORF1ab/nsp13207D207GgAtgGt11AY.46.30.000934
ORF1ab/nsp13207D207NGatAat11AY.46.40.000165
ORF1ab/nsp13207D207GgAtgGt11AY.46.60.000072
ORF1ab/nsp13207D207GgAtgGt11AY.50.000021
ORF1ab/nsp13207D207YGatTat11AY.50.000021
ORF1ab/nsp13207D207NGaTAaC11AY.5.30.000337
ORF1ab/nsp13207D207YGatTat11AY.5.40.000277
ORF1ab/nsp13207D207DgaTgaC11AY.550.000917
ORF1ab/nsp13207D207DgaTgaC11AY.60.000041
ORF1ab/nsp13207D207YGatTat11AY.610.000105
ORF1ab/nsp13207D207delGAT---11AY.680.000274
ORF1ab/nsp13207D207GgAtgGt11AY.7.10.000113
ORF1ab/nsp13207D207delGAT---11AY.720.001361
ORF1ab/nsp13207D207GgAtgGt11AY.740.000116
ORF1ab/nsp13207D207delGAT---11AY.750.000056
ORF1ab/nsp13207D207YGaTTaC11AY.750.000056
ORF1ab/nsp13207D207DgaTgaC11AY.750.000056
ORF1ab/nsp13207D207delGAT---11AY.780.001541
ORF1ab/nsp13207D207GgAtgGt11AY.840.000437
ORF1ab/nsp13207D207NGatAat11AY.840.000437
ORF1ab/nsp13207D207DgaTgaC11AY.880.000884
ORF1ab/nsp13207D207delGAT---11AY.90.000068
ORF1ab/nsp13207D207YGatTat11AY.9.10.000084
ORF1ab/nsp13207D207GgAtgGt11AY.920.000287
ORF1ab/nsp13207D207GgAtgGt11AY.940.000443
ORF1ab/nsp13207D207DgaTgaC11AY.980.000079
ORF1ab/nsp13207D207DgaTgaC11AY.990.001049
ORF1ab/nsp13207D207GgAtgGt11B0.000128
ORF1ab/nsp13207D207DgaTgaC11B0.000128
ORF1ab/nsp13207D207YGatTat11B0.000128
ORF1ab/nsp13207D207CGAtTGt11B.10.000009
ORF1ab/nsp13207D207VgAtgTt11B.10.000009
ORF1ab/nsp13207D207AgAtgCt11B.1.10.000018
ORF1ab/nsp13207D207EgaTgaG11B.1.10.000018
ORF1ab/nsp13207D207delGAT---11B.1.10.000018
ORF1ab/nsp13207D207HGatCat11B.1.10.000018
ORF1ab/nsp13207D207del1Gat-at11B.1.10.000018
ORF1ab/nsp13207D207YGatTat11B.1.1.1860.003436
ORF1ab/nsp13207D207YGatTat11B.1.1.2140.000055
ORF1ab/nsp13207D207YGatTat11B.1.1.2160.00089
ORF1ab/nsp13207D207YGatTat11B.1.1.2170.003636
ORF1ab/nsp13207D207DgaTgaC11B.1.1.2220.000204
ORF1ab/nsp13207D207AgATgCC11B.1.1.2320.001815
ORF1ab/nsp13207D207DgaTgaC11B.1.1.2650.003155
ORF1ab/nsp13207D207EgaTgaA11B.1.1.2770.000759
ORF1ab/nsp13207D207GgAtgGt11B.1.1.3170.000412
ORF1ab/nsp13207D207YGatTat11B.1.1.3170.000412
ORF1ab/nsp13207D207YGatTat11B.1.1.3180.000302
ORF1ab/nsp13207D207YGatTat11B.1.1.3510.002793
ORF1ab/nsp13207D207YGatTat11B.1.1.3660.015873
ORF1ab/nsp13207D207delGAT---11B.1.1.4200.001006
ORF1ab/nsp13207D207delGAT---11B.1.1.4480.002033
ORF1ab/nsp13207D207HGatCat11B.1.1.4820.023256
ORF1ab/nsp13207D207NGatAat11B.1.1.70.000001
ORF1ab/nsp13207D207del2GAt--t11B.1.1.70.000001
ORF1ab/nsp13207D207YGatTat11B.1.1280.000635
ORF1ab/nsp13207D207NGatAat11B.1.1460.004237
ORF1ab/nsp13207D207DgaTgaC11B.1.1570.002985
ORF1ab/nsp13207D207YGatTat11B.1.1600.000031
ORF1ab/nsp13207D207DgaTgaC11B.1.160.330.004425
ORF1ab/nsp13207D207GgAtgGt11B.1.160.80.001289
ORF1ab/nsp13207D207delGAT---11B.1.160.80.001289
ORF1ab/nsp13207D207NGatAat11B.1.1770.000013
ORF1ab/nsp13207D207EgaTgaG11B.1.1770.000013
ORF1ab/nsp13207D207GgAtgGt11B.1.177.120.000152
ORF1ab/nsp13207D207HGatCat11B.1.177.560.000668
ORF1ab/nsp13207D207YGatTat11B.1.177.570.000281
ORF1ab/nsp13207D207GgAtgGt11B.1.177.810.000189
ORF1ab/nsp13207D207delGAT---11B.1.177.830.001481
ORF1ab/nsp13207D207GgAtgGt11B.1.177.860.000183
ORF1ab/nsp13207D207YGatTat11B.1.177.860.000183
ORF1ab/nsp13207D207delGAT---11B.1.177.90.001332
ORF1ab/nsp13207D207YGatTat11B.1.214.20.0006
ORF1ab/nsp13207D207EgaTgaG11B.1.214.20.0006
ORF1ab/nsp13207D207GgAtgGt11B.1.2210.000071
ORF1ab/nsp13207D207EgaTgaA11B.1.2430.00007
ORF1ab/nsp13207D207GgAtgGt11B.1.2580.000067
ORF1ab/nsp13207D207EgaTgaA11B.1.258.70.001912
ORF1ab/nsp13207D207NGatAat11B.1.3200.001245
ORF1ab/nsp13207D207GgAtgGt11B.1.3240.001605
ORF1ab/nsp13207D207DgaTgaC11B.1.3510.00003
ORF1ab/nsp13207D207delGAT---11B.1.36.290.000517
ORF1ab/nsp13207D207NGatAat11B.1.36.310.001751
ORF1ab/nsp13207D207DgaTgaC11B.1.36.380.001642
ORF1ab/nsp13207D207NGatAat11B.1.3960.000706
ORF1ab/nsp13207D207GgAtgGt11B.1.4040.001302
ORF1ab/nsp13207D207SGAtAGt11B.1.4270.00005
ORF1ab/nsp13207D207GgAtgGt11B.1.438.10.000107
ORF1ab/nsp13207D207AgAtgCt11B.1.4620.007246
ORF1ab/nsp13207D207GgAtgGt11B.1.466.20.000391
ORF1ab/nsp13207D207EgaTgaG11B.1.466.20.000391
ORF1ab/nsp13207D207GgAtgGt11B.1.4730.019231
ORF1ab/nsp13207D207EgaTgaA11B.1.5090.000866
ORF1ab/nsp13207D207DgaTgaC11B.1.5250.000113
ORF1ab/nsp13207D207DgaTgaC11B.1.5260.000024
ORF1ab/nsp13207D207YGatTat11B.1.5260.000024
ORF1ab/nsp13207D207DgaTgaC11B.1.5610.000397
ORF1ab/nsp13207D207EgaTgaA11B.1.564.10.001577
ORF1ab/nsp13207D207HGatCat11B.1.5800.004065
ORF1ab/nsp13207D207YGatTat11B.1.6210.000089
ORF1ab/nsp13207D207DgaTgaC11B.1.6230.000536
ORF1ab/nsp13207D207DgaTgaC11B.1.6370.000073
ORF1ab/nsp13207D207YGatTat11B.30.000831
ORF1ab/nsp13207D207GgAtgGt11B.4.60.016667
ORF1ab/nsp13207D207DgaTgaC11B.520.010101
ORF1ab/nsp13207D207GgAtgGt11C.110.010638
ORF1ab/nsp13207D207delGAT---11C.170.055556
ORF1ab/nsp13207D207YGatTat11C.36.30.000567
ORF1ab/nsp13207D207DgaTgaC11C.370.000116
ORF1ab/nsp13207D207HGatCat11D.20.000075
ORF1ab/nsp13207D207del1Gat-at11D.20.000075
ORF1ab/nsp13207D207YGatTat11P.10.000016
ORF1ab/nsp13207D207GgAtgGt11P.1.120.000484
ORF1ab/nsp13207D207GgAtgGt11P.1.150.000232
ORF1ab/nsp13207D207delGAT---11Q.20.000613
ORF1ab/nsp13207D207YGatTat11R.10.00009
ORF1ab/nsp13207D207EgaTgaA11R.10.00009
ORF1ab/nsp13207D207DgaTgaC11R.10.00009