CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 199 & Codon = acT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13199T199TT5523TsynacCacT9147800.85339216831-16833

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13199T199TacCacT780914All0.000149
ORF1ab/nsp13199T199TacCacT372372B.1.258.220.992
ORF1ab/nsp13199T199TacCacT117145B.1.1.70.000105
ORF1ab/nsp13199T199TacCacT4040B.1.20.000352
ORF1ab/nsp13199T199TacCacT2134B.1.617.20.000079
ORF1ab/nsp13199T199TacCacT2930AY.250.000174
ORF1ab/nsp13199T199TacCacT2829AY.430.000124
ORF1ab/nsp13199T199TacCacT2424B.1.160.190.857143
ORF1ab/nsp13199T199TacCacT219AY.30.00002
ORF1ab/nsp13199T199TacCacT914AY.40.000014
ORF1ab/nsp13199T199TacCacT713AY.440.000043
ORF1ab/nsp13199T199TacCacT913B.10.000082
ORF1ab/nsp13199T199TacCacT1313B.1.1770.000171
ORF1ab/nsp13199T199TacCacT810B.1.10.000145
ORF1ab/nsp13199T199TacCacT99B.1.4270.000454
ORF1ab/nsp13199T199TacCacT88B.1.1.3330.008611
ORF1ab/nsp13199T199TacCacT88B.1.5250.000905
ORF1ab/nsp13199T199TacCacT67AY.390.000148
ORF1ab/nsp13199T199TacCacT77P.1.150.001626
ORF1ab/nsp13199T199TacCacT46AY.1030.000025
ORF1ab/nsp13199T199TacCacT66AY.700.001251
ORF1ab/nsp13199T199TacCacT55AY.1100.000563
ORF1ab/nsp13199T199TacCacT23AY.230.000139
ORF1ab/nsp13199T199TacCacT33AY.290.000047
ORF1ab/nsp13199T199TacCacT33AY.75.10.000541
ORF1ab/nsp13199T199TacCacT33B.1.5960.000261
ORF1ab/nsp13199T199TacCacT23P.10.000032
ORF1ab/nsp13199T199TacCacT22AY.1000.000092
ORF1ab/nsp13199T199TacCacT12AY.1020.000027
ORF1ab/nsp13199T199TacCacT22AY.200.000078
ORF1ab/nsp13199T199TacCacT22B.1.1.3350.025974
ORF1ab/nsp13199T199TacCacT22B.1.1.5190.000079
ORF1ab/nsp13199T199TacCacT22B.1.930.001867
ORF1ab/nsp13199T199TacCacT22P.20.000373
ORF1ab/nsp13199T199TacCacT11A.20.000662
ORF1ab/nsp13199T199TacCacT11A.23.10.000704
ORF1ab/nsp13199T199TacCacT11AY.1180.000063
ORF1ab/nsp13199T199TacCacT11AY.120.000316
ORF1ab/nsp13199T199TacCacT11AY.46.60.000072
ORF1ab/nsp13199T199TacCacT11AY.480.000465
ORF1ab/nsp13199T199TacCacT11AY.70.000196
ORF1ab/nsp13199T199TacCacT11AY.750.000056
ORF1ab/nsp13199T199TacCacT11AY.9.20.000037
ORF1ab/nsp13199T199TacCacT11B.1.1.2140.000055
ORF1ab/nsp13199T199TacCacT11B.1.1.250.000569
ORF1ab/nsp13199T199TacCacT11B.1.1600.000031
ORF1ab/nsp13199T199TacCacT11B.1.351.20.000303
ORF1ab/nsp13199T199TacCacT11B.1.3690.000285
ORF1ab/nsp13199T199TacCacT11B.1.3960.000706
ORF1ab/nsp13199T199TacCacT11B.1.4080.00369
ORF1ab/nsp13199T199TacCacT11B.1.4090.000781
ORF1ab/nsp13199T199TacCacT11B.1.5640.000426
ORF1ab/nsp13199T199TacCacT11B.1.6360.006711
ORF1ab/nsp13199T199TacCacT11B.30.000831
ORF1ab/nsp13199T199TacCacT11C.370.000116
ORF1ab/nsp13199T199TacCacT11Q.80.000165