CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 169

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13169V169FV5493FnonsynGttTtt530953080.99981216741-16743
ORF1ab/nsp13169V169FV5493FnonsynGtTTtC530910.00018835916741-16743
ORF1ab/nsp13169V169GV5493GnonsyngTtgGt16161616116741-16743
ORF1ab/nsp13169V169VV5493VsyngtTgtC109410390.94972616741-16743
ORF1ab/nsp13169V169VV5493VsyngtTgtA1094530.048446116741-16743
ORF1ab/nsp13169V169VV5493VsyngtTgtG109420.0018281516741-16743
ORF1ab/nsp13169V169IV5493InonsynGttAtt10071007116741-16743
ORF1ab/nsp13169V169delV5493deldelGTT---9696116741-16743
ORF1ab/nsp13169V169AV5493AnonsyngTtgCt70690.98571416741-16743
ORF1ab/nsp13169V169AV5493AnonsyngTTgCC7010.014285716741-16743
ORF1ab/nsp13169V169LV5493LnonsynGttCtt12100.83333316741-16743
ORF1ab/nsp13169V169LV5493LnonsynGtTTtA1210.083333316741-16743
ORF1ab/nsp13169V169LV5493LnonsynGtTCtC1210.083333316741-16743
ORF1ab/nsp13169V169DV5493DnonsyngTtgAt1010116741-16743
ORF1ab/nsp13169V169SV5493SnonsynGTtTCt430.7516741-16743
ORF1ab/nsp13169V169SV5493SnonsynGTTTCC410.2516741-16743
ORF1ab/nsp13169V169PV5493PnonsynGTtCCt33116741-16743
ORF1ab/nsp13169V169del2V5493del2delGTT--N320.66666716741-16743
ORF1ab/nsp13169V169del1V5493del1delgTtg-t320.66666716741-16743
ORF1ab/nsp13169V169del2V5493del2delgTTg--310.33333316741-16743
ORF1ab/nsp13169V169del1V5493del1delGtt-tt310.33333316741-16743
ORF1ab/nsp13169V169EV5493EnonsyngTTgAA11116741-16743

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13169V169FGttTtt53085309All0.001015
ORF1ab/nsp13169V169FGtTTtC15309All0
ORF1ab/nsp13169V169GgTtgGt16161616All0.000309
ORF1ab/nsp13169V169GgTtgGt14921492AY.420.060023
ORF1ab/nsp13169V169VgtTgtC10391094All0.000199
ORF1ab/nsp13169V169VgtTgtA531094All0.00001
ORF1ab/nsp13169V169VgtTgtG21094All0
ORF1ab/nsp13169V169IGttAtt10071007All0.000193
ORF1ab/nsp13169V169IGttAtt771771B.1.2390.941392
ORF1ab/nsp13169V169VgtTgtC729729B.1.4040.949219
ORF1ab/nsp13169V169FGttTtt577577B.1.617.20.002173
ORF1ab/nsp13169V169FGttTtt528528AY.620.230065
ORF1ab/nsp13169V169FGttTtt349349B.1.1.70.000312
ORF1ab/nsp13169V169FGttTtt305305AY.40.000475
ORF1ab/nsp13169V169FGttTtt292292B.1.5610.115919
ORF1ab/nsp13169V169FGttTtt237237AY.440.001443
ORF1ab/nsp13169V169FGttTtt230230B.1.1.2271
ORF1ab/nsp13169V169FGttTtt221221B.1.20.001946
ORF1ab/nsp13169V169FGttTtt216217AY.430.000957
ORF1ab/nsp13169V169FGtTTtC1217AY.430.000004
ORF1ab/nsp13169V169FGttTtt163163B.1.5960.014204
ORF1ab/nsp13169V169FGttTtt154154AY.1020.004083
ORF1ab/nsp13169V169FGttTtt131131AY.1030.000813
ORF1ab/nsp13169V169FGttTtt119119B.1.177.480.371875
ORF1ab/nsp13169V169FGttTtt104104D.20.007804
ORF1ab/nsp13169V169delGTT---9696All0.000018
ORF1ab/nsp13169V169FGttTtt9393B.1.5160.181996
ORF1ab/nsp13169V169FGttTtt8484B.10.000769
ORF1ab/nsp13169V169FGttTtt8383AY.540.007914
ORF1ab/nsp13169V169FGttTtt8080AY.200.003109
ORF1ab/nsp13169V169FGttTtt7676AY.330.005075
ORF1ab/nsp13169V169VgtTgtC7676B.1.5750.023058
ORF1ab/nsp13169V169IGttAtt7575B.10.000687
ORF1ab/nsp13169V169FGttTtt7272AY.30.000716
ORF1ab/nsp13169V169AgTtgCt6970All0.000013
ORF1ab/nsp13169V169AgTTgCC170All0
ORF1ab/nsp13169V169FGttTtt6464AY.39.10.002535
ORF1ab/nsp13169V169VgtTgtC6263B.10.000568
ORF1ab/nsp13169V169VgtTgtA163B.10.000009
ORF1ab/nsp13169V169FGttTtt6060AY.390.001483
ORF1ab/nsp13169V169GgTtgGt5959B.1.1600.00184
ORF1ab/nsp13169V169delGTT---5858B.1.1.70.000052
ORF1ab/nsp13169V169FGttTtt5454AY.46.60.003899
ORF1ab/nsp13169V169FGttTtt4141AY.250.000247
ORF1ab/nsp13169V169FGttTtt4141AY.260.001161
ORF1ab/nsp13169V169FGttTtt4040AY.1080.044101
ORF1ab/nsp13169V169FGttTtt4040AY.750.002241
ORF1ab/nsp13169V169IGttAtt3636B.1.1.70.000032
ORF1ab/nsp13169V169FGttTtt3434AY.1200.001264
ORF1ab/nsp13169V169FGttTtt3333AY.420.001328
ORF1ab/nsp13169V169FGttTtt3232B.1.10.000581
ORF1ab/nsp13169V169GgTtgGt3030B.1.1.2140.001664
ORF1ab/nsp13169V169VgtTgtC2629B.1.1.70.000023
ORF1ab/nsp13169V169VgtTgtA329B.1.1.70.000003
ORF1ab/nsp13169V169FGttTtt2929B.1.3110.007963
ORF1ab/nsp13169V169FGttTtt2929B.1.3190.088415
ORF1ab/nsp13169V169FGttTtt2727B.1.2210.001918
ORF1ab/nsp13169V169FGttTtt2727P.10.000425
ORF1ab/nsp13169V169FGttTtt2525AY.290.000394
ORF1ab/nsp13169V169IGttAtt2323AY.40.000036
ORF1ab/nsp13169V169FGttTtt2121B.1.1700.090517
ORF1ab/nsp13169V169FGttTtt2020AY.50.000413
ORF1ab/nsp13169V169FGttTtt2020B.1.4290.000471
ORF1ab/nsp13169V169VgtTgtC1617AY.40.000025
ORF1ab/nsp13169V169VgtTgtA117AY.40.000002
ORF1ab/nsp13169V169FGttTtt1616AY.1090.011834
ORF1ab/nsp13169V169AgTtgCt1515AY.1060.005023
ORF1ab/nsp13169V169VgtTgtC1415AY.250.000084
ORF1ab/nsp13169V169VgtTgtG115AY.250.000006
ORF1ab/nsp13169V169FGttTtt1414AY.1060.004689
ORF1ab/nsp13169V169FGttTtt1414AY.1110.002564
ORF1ab/nsp13169V169FGttTtt1414AY.4.50.001505
ORF1ab/nsp13169V169FGttTtt1414B.1.5260.000329
ORF1ab/nsp13169V169FGttTtt1313AY.1170.001099
ORF1ab/nsp13169V169FGttTtt1313AY.470.000404
ORF1ab/nsp13169V169FGttTtt1313B.1.2430.000905
ORF1ab/nsp13169V169FGttTtt1313B.1.3510.000386
ORF1ab/nsp13169V169LGttCtt1012All0.000002
ORF1ab/nsp13169V169LGtTTtA112All0
ORF1ab/nsp13169V169LGtTCtC112All0
ORF1ab/nsp13169V169VgtTgtC1212AY.1210.001624
ORF1ab/nsp13169V169VgtTgtA1012AY.360.001482
ORF1ab/nsp13169V169VgtTgtC212AY.360.000296
ORF1ab/nsp13169V169FGttTtt1212AY.4.10.00885
ORF1ab/nsp13169V169FGttTtt1212AY.980.000948
ORF1ab/nsp13169V169FGttTtt1212B.1.1600.000374
ORF1ab/nsp13169V169FGttTtt1111B.1.36.290.005691
ORF1ab/nsp13169V169GgTtgGt1111B.1.617.20.000041
ORF1ab/nsp13169V169DgTtgAt1010All0.000002
ORF1ab/nsp13169V169FGttTtt1010AY.1000.00046
ORF1ab/nsp13169V169IGttAtt1010B.1.2430.000696
ORF1ab/nsp13169V169FGttTtt1010B.1.5380.080645
ORF1ab/nsp13169V169IGttAtt1010B.1.617.20.000038
ORF1ab/nsp13169V169VgtTgtC89AY.430.000035
ORF1ab/nsp13169V169VgtTgtA19AY.430.000004
ORF1ab/nsp13169V169IGttAtt99B.1.20.000079
ORF1ab/nsp13169V169FGttTtt99B.1.2340.001187
ORF1ab/nsp13169V169FGttTtt88AY.1190.000282
ORF1ab/nsp13169V169FGttTtt88AY.230.000558
ORF1ab/nsp13169V169VgtTgtA78AY.4.20.000152
ORF1ab/nsp13169V169VgtTgtC18AY.4.20.000022
ORF1ab/nsp13169V169AgTtgCt78AY.430.000031
ORF1ab/nsp13169V169AgTTgCC18AY.430.000004
ORF1ab/nsp13169V169FGttTtt88AY.98.10.000387
ORF1ab/nsp13169V169IGttAtt88B.1.1.5190.000318
ORF1ab/nsp13169V169VgtTgtA88B.1.3240.012841
ORF1ab/nsp13169V169VgtTgtC78P.10.00011
ORF1ab/nsp13169V169VgtTgtA18P.10.000016
ORF1ab/nsp13169V169FGttTtt88P.20.001493
ORF1ab/nsp13169V169AgTtgCt88Q.10.001011
ORF1ab/nsp13169V169FGttTtt77AY.450.000852
ORF1ab/nsp13169V169GgTtgGt77B.1.1.70.000006
ORF1ab/nsp13169V169AgTtgCt77B.1.1.70.000006
ORF1ab/nsp13169V169FGttTtt77B.1.3240.011236
ORF1ab/nsp13169V169FGttTtt77B.1.6090.003356
ORF1ab/nsp13169V169FGttTtt77B.1.617.10.000903
ORF1ab/nsp13169V169FGttTtt77B.1.930.006536
ORF1ab/nsp13169V169FGttTtt66AY.4.20.00013
ORF1ab/nsp13169V169IGttAtt66AY.440.000037
ORF1ab/nsp13169V169FGttTtt66AY.60.000247
ORF1ab/nsp13169V169FGttTtt66AY.880.005305
ORF1ab/nsp13169V169FGttTtt66B.1.1.5190.000238
ORF1ab/nsp13169V169FGttTtt66B.1.5250.000679
ORF1ab/nsp13169V169VgtTgtA56B.1.5250.000566
ORF1ab/nsp13169V169VgtTgtC16B.1.5250.000113
ORF1ab/nsp13169V169VgtTgtA46B.1.6210.000354
ORF1ab/nsp13169V169VgtTgtC26B.1.6210.000177
ORF1ab/nsp13169V169FGttTtt55AY.1210.000677
ORF1ab/nsp13169V169FGttTtt55AY.460.00052
ORF1ab/nsp13169V169VgtTgtC55AY.75.10.000902
ORF1ab/nsp13169V169FGttTtt55AY.9.20.000184
ORF1ab/nsp13169V169FGttTtt55B.1.1.2160.004452
ORF1ab/nsp13169V169FGttTtt55B.1.1.3910.042735
ORF1ab/nsp13169V169AgTtgCt55B.1.1770.000066
ORF1ab/nsp13169V169delGTT---55B.1.1770.000066
ORF1ab/nsp13169V169VgtTgtC55B.1.20.000044
ORF1ab/nsp13169V169FGttTtt55B.1.2650.006353
ORF1ab/nsp13169V169FGttTtt55B.1.2810.108696
ORF1ab/nsp13169V169FGttTtt55B.1.36.220.006039
ORF1ab/nsp13169V169FGttTtt55B.1.5090.004329
ORF1ab/nsp13169V169delGTT---440.222222
ORF1ab/nsp13169V169SGTtTCt34All0.000001
ORF1ab/nsp13169V169SGTTTCC14All0
ORF1ab/nsp13169V169VgtTgtC44AY.260.000113
ORF1ab/nsp13169V169IGttAtt44AY.30.00004
ORF1ab/nsp13169V169VgtTgtC44AY.3.10.000341
ORF1ab/nsp13169V169FGttTtt44AY.370.001264
ORF1ab/nsp13169V169delGTT---44AY.40.000006
ORF1ab/nsp13169V169FGttTtt44AY.610.000419
ORF1ab/nsp13169V169FGttTtt44AY.820.005427
ORF1ab/nsp13169V169FGttTtt44AY.9.10.000335
ORF1ab/nsp13169V169VgtTgtC44B.1.10.000073
ORF1ab/nsp13169V169VgtTgtC44B.1.1.370.000771
ORF1ab/nsp13169V169FGttTtt44B.1.351.50.002398
ORF1ab/nsp13169V169FGttTtt44B.1.360.000584
ORF1ab/nsp13169V169FGttTtt44B.1.575.10.009756
ORF1ab/nsp13169V169VgtTgtC44B.1.5880.00364
ORF1ab/nsp13169V169VgtTgtC44B.1.617.20.000015
ORF1ab/nsp13169V169FGttTtt44B.1.6210.000354
ORF1ab/nsp13169V169IGttAtt44P.10.000063
ORF1ab/nsp13169V169LGttCtt34P.10.000047
ORF1ab/nsp13169V169LGtTCtC14P.10.000016
ORF1ab/nsp13169V169FGttTtt44P.1.140.000191
ORF1ab/nsp13169V169FGttTtt44P.1.150.000929
ORF1ab/nsp13169V169PGTtCCt33All0.000001
ORF1ab/nsp13169V169del2GTT--N23All0
ORF1ab/nsp13169V169del1gTtg-t23All0
ORF1ab/nsp13169V169del1Gtt-tt13All0
ORF1ab/nsp13169V169del2gTTg--13All0
ORF1ab/nsp13169V169VgtTgtC33AY.1020.00008
ORF1ab/nsp13169V169IGttAtt33AY.1030.000019
ORF1ab/nsp13169V169FGttTtt33AY.130.000483
ORF1ab/nsp13169V169FGttTtt33AY.16.10.00141
ORF1ab/nsp13169V169IGttAtt33AY.250.000018
ORF1ab/nsp13169V169FGttTtt33AY.4.2.10.000447
ORF1ab/nsp13169V169SGTtTCt23AY.430.000009
ORF1ab/nsp13169V169SGTTTCC13AY.430.000004
ORF1ab/nsp13169V169AgTtgCt33AY.440.000018
ORF1ab/nsp13169V169VgtTgtC23AY.440.000012
ORF1ab/nsp13169V169VgtTgtA13AY.440.000006
ORF1ab/nsp13169V169VgtTgtC23AY.50.000041
ORF1ab/nsp13169V169VgtTgtA13AY.50.000021
ORF1ab/nsp13169V169FGttTtt33AY.590.001589
ORF1ab/nsp13169V169FGttTtt33AY.75.10.000541
ORF1ab/nsp13169V169VgtTgtC33B.1.1.250.001706
ORF1ab/nsp13169V169AgTtgCt33B.1.1600.000094
ORF1ab/nsp13169V169IGttAtt33B.1.177.860.00055
ORF1ab/nsp13169V169FGttTtt33B.1.220.003953
ORF1ab/nsp13169V169FGttTtt33B.1.258.140.002941
ORF1ab/nsp13169V169FGttTtt33B.1.36.170.001482
ORF1ab/nsp13169V169FGttTtt33B.1.3910.003382
ORF1ab/nsp13169V169FGttTtt33B.1.3960.002117
ORF1ab/nsp13169V169IGttAtt33B.1.4270.000151
ORF1ab/nsp13169V169FGttTtt33B.1.466.20.001174
ORF1ab/nsp13169V169FGttTtt33B.1.5170.001281
ORF1ab/nsp13169V169FGttTtt33B.1.5300.021429
ORF1ab/nsp13169V169FGttTtt33B.1.5820.001472
ORF1ab/nsp13169V169AgTtgCt33B.1.617.20.000011
ORF1ab/nsp13169V169FGttTtt33B.1.6370.000219
ORF1ab/nsp13169V169FGttTtt33N.40.012766
ORF1ab/nsp13169V169GgTtgGt220.111111
ORF1ab/nsp13169V169VgtTgtC22AD.20.000438
ORF1ab/nsp13169V169AgTtgCt22AY.1030.000012
ORF1ab/nsp13169V169FGttTtt22AY.110.002677
ORF1ab/nsp13169V169FGttTtt22AY.1130.000285
ORF1ab/nsp13169V169FGttTtt22AY.120.000632
ORF1ab/nsp13169V169FGttTtt22AY.140.000176
ORF1ab/nsp13169V169FGttTtt22AY.210.003795
ORF1ab/nsp13169V169FGttTtt22AY.3.10.000171
ORF1ab/nsp13169V169FGttTtt22AY.320.001065
ORF1ab/nsp13169V169IGttAtt22AY.390.000049
ORF1ab/nsp13169V169GgTtgGt22AY.40.000003
ORF1ab/nsp13169V169delGTT---22AY.4.50.000215
ORF1ab/nsp13169V169FGttTtt22AY.400.001929
ORF1ab/nsp13169V169IGttAtt22AY.430.000009
ORF1ab/nsp13169V169delGTT---22AY.430.000009
ORF1ab/nsp13169V169GgTtgGt22AY.440.000012
ORF1ab/nsp13169V169FGttTtt22AY.680.000547
ORF1ab/nsp13169V169FGttTtt22AY.740.000231
ORF1ab/nsp13169V169FGttTtt22AY.80.001212
ORF1ab/nsp13169V169FGttTtt22AY.90.000135
ORF1ab/nsp13169V169VgtTgtC12AY.910.00073
ORF1ab/nsp13169V169VgtTgtA12AY.910.00073
ORF1ab/nsp13169V169FGttTtt22AY.940.000885
ORF1ab/nsp13169V169FGttTtt22AZ.20.001642
ORF1ab/nsp13169V169delGTT---22B.10.000018
ORF1ab/nsp13169V169GgTtgGt22B.1.1.1090.08
ORF1ab/nsp13169V169FGttTtt22B.1.1.1230.035714
ORF1ab/nsp13169V169FGttTtt22B.1.1.3050.007722
ORF1ab/nsp13169V169FGttTtt22B.1.1.3060.000877
ORF1ab/nsp13169V169FGttTtt22B.1.1.3260.003521
ORF1ab/nsp13169V169LGttCtt22B.1.1.70.000002
ORF1ab/nsp13169V169del1Gtt-tt12B.1.1.70.000001
ORF1ab/nsp13169V169del1gTtg-t12B.1.1.70.000001
ORF1ab/nsp13169V169VgtTgtC22B.1.1.700.000682
ORF1ab/nsp13169V169VgtTgtC22B.1.1460.008475
ORF1ab/nsp13169V169IGttAtt22B.1.1770.000026
ORF1ab/nsp13169V169FGttTtt22B.1.1770.000026
ORF1ab/nsp13169V169VgtTgtA12B.1.1770.000013
ORF1ab/nsp13169V169VgtTgtC12B.1.1770.000013
ORF1ab/nsp13169V169FGttTtt22B.1.177.170.001642
ORF1ab/nsp13169V169FGttTtt22B.1.177.320.002699
ORF1ab/nsp13169V169IGttAtt22B.1.177.440.001038
ORF1ab/nsp13169V169AgTtgCt22B.1.20.000018
ORF1ab/nsp13169V169VgtTgtC22B.1.2210.000142
ORF1ab/nsp13169V169FGttTtt22B.1.2580.000133
ORF1ab/nsp13169V169FGttTtt22B.1.351.20.000605
ORF1ab/nsp13169V169FGttTtt22B.1.351.30.001753
ORF1ab/nsp13169V169FGttTtt22B.1.36.80.002
ORF1ab/nsp13169V169FGttTtt22B.1.4270.000101
ORF1ab/nsp13169V169IGttAtt22B.1.4290.000047
ORF1ab/nsp13169V169FGttTtt22B.1.4700.002809
ORF1ab/nsp13169V169FGttTtt22B.1.5640.000852
ORF1ab/nsp13169V169FGttTtt22B.1.5800.00813
ORF1ab/nsp13169V169VgtTgtC22B.1.5820.000981
ORF1ab/nsp13169V169FGttTtt22B.1.5990.007299
ORF1ab/nsp13169V169IGttAtt22B.1.6090.000959
ORF1ab/nsp13169V169IGttAtt22B.1.6100.007092
ORF1ab/nsp13169V169FGttTtt22B.1.6200.001892
ORF1ab/nsp13169V169FGttTtt22B.30.001661
ORF1ab/nsp13169V169FGttTtt22C.370.000232
ORF1ab/nsp13169V169FGttTtt11A.180.05
ORF1ab/nsp13169V169IGttAtt11A.20.000662
ORF1ab/nsp13169V169DgTtgAt11A.2.40.003367
ORF1ab/nsp13169V169FGttTtt11A.2.50.000499
ORF1ab/nsp13169V169del2GTT--N11AD.20.000219
ORF1ab/nsp13169V169delGTT---11AD.20.000219
ORF1ab/nsp13169V169EgTTgAA11All0
ORF1ab/nsp13169V169IGttAtt11AY.1000.000046
ORF1ab/nsp13169V169del2gTTg--11AY.1000.000046
ORF1ab/nsp13169V169GgTtgGt11AY.1030.000006
ORF1ab/nsp13169V169FGttTtt11AY.1100.000113
ORF1ab/nsp13169V169VgtTgtC11AY.1160.000287
ORF1ab/nsp13169V169IGttAtt11AY.116.10.000311
ORF1ab/nsp13169V169FGttTtt11AY.116.10.000311
ORF1ab/nsp13169V169VgtTgtA11AY.1180.000063
ORF1ab/nsp13169V169GgTtgGt11AY.120.000316
ORF1ab/nsp13169V169delGTT---11AY.1200.000037
ORF1ab/nsp13169V169VgtTgtC11AY.1200.000037
ORF1ab/nsp13169V169FGttTtt11AY.120.2.10.000498
ORF1ab/nsp13169V169IGttAtt11AY.1210.000135
ORF1ab/nsp13169V169IGttAtt11AY.140.000088
ORF1ab/nsp13169V169VgtTgtC11AY.160.00038
ORF1ab/nsp13169V169FGttTtt11AY.160.00038
ORF1ab/nsp13169V169VgtTgtC11AY.200.000039
ORF1ab/nsp13169V169VgtTgtA11AY.23.10.000417
ORF1ab/nsp13169V169delGTT---11AY.240.000431
ORF1ab/nsp13169V169LGttCtt11AY.250.000006
ORF1ab/nsp13169V169delGTT---11AY.250.000006
ORF1ab/nsp13169V169DgTtgAt11AY.250.000006
ORF1ab/nsp13169V169IGttAtt11AY.260.000028
ORF1ab/nsp13169V169FGttTtt11AY.270.000065
ORF1ab/nsp13169V169VgtTgtA11AY.290.000016
ORF1ab/nsp13169V169VgtTgtA11AY.330.000067
ORF1ab/nsp13169V169VgtTgtC11AY.340.000097
ORF1ab/nsp13169V169FGttTtt11AY.340.000097
ORF1ab/nsp13169V169FGttTtt11AY.34.10.00051
ORF1ab/nsp13169V169GgTtgGt11AY.34.10.00051
ORF1ab/nsp13169V169IGttAtt11AY.350.000233
ORF1ab/nsp13169V169GgTtgGt11AY.390.000025
ORF1ab/nsp13169V169IGttAtt11AY.39.10.00004
ORF1ab/nsp13169V169LGttCtt11AY.40.000002
ORF1ab/nsp13169V169AgTtgCt11AY.40.000002
ORF1ab/nsp13169V169GgTtgGt11AY.430.000004
ORF1ab/nsp13169V169VgtTgtC11AY.450.000122
ORF1ab/nsp13169V169GgTtgGt11AY.450.000122
ORF1ab/nsp13169V169delGTT---11AY.46.20.000635
ORF1ab/nsp13169V169FGttTtt11AY.46.30.000934
ORF1ab/nsp13169V169FGttTtt11AY.46.50.000198
ORF1ab/nsp13169V169GgTtgGt11AY.46.60.000072
ORF1ab/nsp13169V169VgtTgtC11AY.470.000031
ORF1ab/nsp13169V169AgTtgCt11AY.470.000031
ORF1ab/nsp13169V169FGttTtt11AY.480.000465
ORF1ab/nsp13169V169IGttAtt11AY.50.000021
ORF1ab/nsp13169V169FGttTtt11AY.5.40.000277
ORF1ab/nsp13169V169IGttAtt11AY.540.000095
ORF1ab/nsp13169V169VgtTgtC11AY.550.000917
ORF1ab/nsp13169V169FGttTtt11AY.570.000656
ORF1ab/nsp13169V169IGttAtt11AY.570.000656
ORF1ab/nsp13169V169AgTtgCt11AY.60.000041
ORF1ab/nsp13169V169FGttTtt11AY.600.000938
ORF1ab/nsp13169V169FGttTtt11AY.630.000387
ORF1ab/nsp13169V169FGttTtt11AY.670.000464
ORF1ab/nsp13169V169VgtTgtA11AY.690.000187
ORF1ab/nsp13169V169VgtTgtC11AY.70.000196
ORF1ab/nsp13169V169IGttAtt11AY.75.10.00018
ORF1ab/nsp13169V169IGttAtt11AY.80.000606
ORF1ab/nsp13169V169IGttAtt11AY.810.001992
ORF1ab/nsp13169V169VgtTgtC11AY.840.000437
ORF1ab/nsp13169V169FGttTtt11AY.840.000437
ORF1ab/nsp13169V169FGttTtt11AY.850.000427
ORF1ab/nsp13169V169VgtTgtC11AY.90.000068
ORF1ab/nsp13169V169FGttTtt11AY.930.000273
ORF1ab/nsp13169V169FGttTtt11AY.950.000761
ORF1ab/nsp13169V169delGTT---11AY.99.10.001553
ORF1ab/nsp13169V169VgtTgtA11AY.99.20.000092
ORF1ab/nsp13169V169delGTT---11AZ.20.000821
ORF1ab/nsp13169V169VgtTgtC11B0.000128
ORF1ab/nsp13169V169FGttTtt11B0.000128
ORF1ab/nsp13169V169EgTTgAA11B.10.000009
ORF1ab/nsp13169V169AgTtgCt11B.10.000009
ORF1ab/nsp13169V169DgTtgAt11B.10.000009
ORF1ab/nsp13169V169del1gTtg-t11B.10.000009
ORF1ab/nsp13169V169IGttAtt11B.1.10.000018
ORF1ab/nsp13169V169LGtTTtA11B.1.10.000018
ORF1ab/nsp13169V169FGttTtt11B.1.1.1890.001513
ORF1ab/nsp13169V169AgTtgCt11B.1.1.2160.00089
ORF1ab/nsp13169V169VgtTgtC11B.1.1.2190.005
ORF1ab/nsp13169V169FGttTtt11B.1.1.2220.000204
ORF1ab/nsp13169V169IGttAtt11B.1.1.280.000311
ORF1ab/nsp13169V169FGttTtt11B.1.1.280.000311
ORF1ab/nsp13169V169FGttTtt11B.1.1.3120.001912
ORF1ab/nsp13169V169del2GTT--N11B.1.1.3150.008475
ORF1ab/nsp13169V169AgTtgCt11B.1.1.3180.000302
ORF1ab/nsp13169V169FGttTtt11B.1.1.3180.000302
ORF1ab/nsp13169V169DgTtgAt11B.1.1.330.000421
ORF1ab/nsp13169V169DgTtgAt11B.1.1.4090.002833
ORF1ab/nsp13169V169FGttTtt11B.1.1.4310.016129
ORF1ab/nsp13169V169AgTtgCt11B.1.1.4480.002033
ORF1ab/nsp13169V169DgTtgAt11B.1.1.460.004367
ORF1ab/nsp13169V169FGttTtt11B.1.1.500.000679
ORF1ab/nsp13169V169FGttTtt11B.1.1.5140.038462
ORF1ab/nsp13169V169PGTtCCt11B.1.1.540.003021
ORF1ab/nsp13169V169delGTT---11B.1.1.700.000341
ORF1ab/nsp13169V169FGttTtt11B.1.1110.001175
ORF1ab/nsp13169V169FGttTtt11B.1.1280.000635
ORF1ab/nsp13169V169FGttTtt11B.1.1590.012195
ORF1ab/nsp13169V169DgTtgAt11B.1.1600.000031
ORF1ab/nsp13169V169FGttTtt11B.1.160.250.011111
ORF1ab/nsp13169V169delGTT---11B.1.177.160.000664
ORF1ab/nsp13169V169delGTT---11B.1.177.170.000821
ORF1ab/nsp13169V169FGttTtt11B.1.177.200.001517
ORF1ab/nsp13169V169delGTT---11B.1.177.540.000606
ORF1ab/nsp13169V169IGttAtt11B.1.177.730.000566
ORF1ab/nsp13169V169delGTT---11B.1.177.730.000566
ORF1ab/nsp13169V169delGTT---11B.1.177.760.002494
ORF1ab/nsp13169V169FGttTtt11B.1.177.810.000189
ORF1ab/nsp13169V169delGTT---11B.1.177.830.001481
ORF1ab/nsp13169V169DgTtgAt11B.1.20.000009
ORF1ab/nsp13169V169AgTtgCt11B.1.2100.002132
ORF1ab/nsp13169V169FGttTtt11B.1.2150.009615
ORF1ab/nsp13169V169IGttAtt11B.1.2210.000071
ORF1ab/nsp13169V169VgtTgtC11B.1.2340.000132
ORF1ab/nsp13169V169IGttAtt11B.1.2400.000216
ORF1ab/nsp13169V169IGttAtt11B.1.2410.000812
ORF1ab/nsp13169V169VgtTgtC11B.1.2410.000812
ORF1ab/nsp13169V169FGttTtt11B.1.2410.000812
ORF1ab/nsp13169V169delGTT---11B.1.2420.018868
ORF1ab/nsp13169V169PGTtCCt11B.1.2420.018868
ORF1ab/nsp13169V169VgtTgtA11B.1.2430.00007
ORF1ab/nsp13169V169delGTT---11B.1.2580.000067
ORF1ab/nsp13169V169FGttTtt11B.1.258.170.000104
ORF1ab/nsp13169V169LGttCtt11B.1.2790.000514
ORF1ab/nsp13169V169FGttTtt11B.1.2790.000514
ORF1ab/nsp13169V169IGttAtt11B.1.2840.013158
ORF1ab/nsp13169V169AgTtgCt11B.1.3110.000275
ORF1ab/nsp13169V169VgtTgtC11B.1.3510.00003
ORF1ab/nsp13169V169VgtTgtC11B.1.360.000146
ORF1ab/nsp13169V169AgTtgCt11B.1.36.10.00114
ORF1ab/nsp13169V169FGttTtt11B.1.3690.000285
ORF1ab/nsp13169V169IGttAtt11B.1.3690.000285
ORF1ab/nsp13169V169VgtTgtC11B.1.4030.003268
ORF1ab/nsp13169V169VgtTgtC11B.1.4270.00005
ORF1ab/nsp13169V169AgTtgCt11B.1.4270.00005
ORF1ab/nsp13169V169FGttTtt11B.1.4340.052632
ORF1ab/nsp13169V169FGttTtt11B.1.4590.004082
ORF1ab/nsp13169V169AgTtgCt11B.1.4680.005714
ORF1ab/nsp13169V169PGTtCCt11B.1.4970.000315
ORF1ab/nsp13169V169FGttTtt11B.1.4990.00105
ORF1ab/nsp13169V169VgtTgtG11B.1.5260.000024
ORF1ab/nsp13169V169GgTtgGt11B.1.5260.000024
ORF1ab/nsp13169V169FGttTtt11B.1.5400.009709
ORF1ab/nsp13169V169FGttTtt11B.1.5490.007194
ORF1ab/nsp13169V169VgtTgtC11B.1.5610.000397
ORF1ab/nsp13169V169VgtTgtA11B.1.5650.00081
ORF1ab/nsp13169V169IGttAtt11B.1.5670.003333
ORF1ab/nsp13169V169VgtTgtC11B.1.5670.003333
ORF1ab/nsp13169V169DgTtgAt11B.1.5680.001111
ORF1ab/nsp13169V169VgtTgtC11B.1.5900.004545
ORF1ab/nsp13169V169IGttAtt11B.1.5960.000087
ORF1ab/nsp13169V169FGttTtt11B.1.5970.00463
ORF1ab/nsp13169V169DgTtgAt11B.1.617.20.000004
ORF1ab/nsp13169V169LGttCtt11B.1.617.20.000004
ORF1ab/nsp13169V169delGTT---11B.1.617.20.000004
ORF1ab/nsp13169V169FGttTtt11B.1.6180.004032
ORF1ab/nsp13169V169GgTtgGt11B.1.619.10.000641
ORF1ab/nsp13169V169delGTT---11B.1.621.10.000506
ORF1ab/nsp13169V169VgtTgtC11B.1.6230.000536
ORF1ab/nsp13169V169FGttTtt11B.1.6280.000352
ORF1ab/nsp13169V169FGttTtt11B.1.6310.003367
ORF1ab/nsp13169V169FGttTtt11B.1.80.001972
ORF1ab/nsp13169V169VgtTgtC11B.1.810.021277
ORF1ab/nsp13169V169IGttAtt11B.1.9.50.005682
ORF1ab/nsp13169V169VgtTgtC11B.30.000831
ORF1ab/nsp13169V169FGttTtt11B.350.007812
ORF1ab/nsp13169V169FGttTtt11B.400.000364
ORF1ab/nsp13169V169VgtTgtC11B.410.008
ORF1ab/nsp13169V169FGttTtt11C.180.002591
ORF1ab/nsp13169V169FGttTtt11C.360.000911
ORF1ab/nsp13169V169FGttTtt11D.30.005917
ORF1ab/nsp13169V169FGttTtt11M.10.023256
ORF1ab/nsp13169V169AgTtgCt11P.10.000016
ORF1ab/nsp13169V169VgtTgtC11P.1.140.000048
ORF1ab/nsp13169V169FGttTtt11P.1.160.000374
ORF1ab/nsp13169V169FGttTtt11P.1.20.001156
ORF1ab/nsp13169V169LGttCtt11P.20.000187
ORF1ab/nsp13169V169AgTtgCt11P.20.000187
ORF1ab/nsp13169V169SGTtTCt11P.20.000187
ORF1ab/nsp13169V169FGttTtt11P.70.004367
ORF1ab/nsp13169V169delGTT---11Q.80.000165
ORF1ab/nsp13169V169FGttTtt11Q.80.000165