CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 166

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13166S166LS5490LnonsyntCatTa631663130.99952516732-16734
ORF1ab/nsp13166S166LS5490LnonsynTCACTT631620.00031665616732-16734
ORF1ab/nsp13166S166LS5490LnonsynTCACTG631610.00015832816732-16734
ORF1ab/nsp13166S166SS5490SsyntcAtcG6555920.90381716732-16734
ORF1ab/nsp13166S166SS5490SsyntcAtcT655440.067175616732-16734
ORF1ab/nsp13166S166SS5490SsyntcAtcC655180.027480916732-16734
ORF1ab/nsp13166S166SS5490SsynTCAAGT65510.0015267216732-16734
ORF1ab/nsp13166S166delS5490deldelTCA---7777116732-16734
ORF1ab/nsp13166S166XS5490XnonsyntCatAa30270.916732-16734
ORF1ab/nsp13166S166XS5490XnonsyntCatGa3030.116732-16734
ORF1ab/nsp13166S166AS5490AnonsynTcaGca2929116732-16734
ORF1ab/nsp13166S166TS5490TnonsynTcaAca21170.80952416732-16734
ORF1ab/nsp13166S166TS5490TnonsynTcAAcG2120.095238116732-16734
ORF1ab/nsp13166S166TS5490TnonsynTcAAcC2110.04761916732-16734
ORF1ab/nsp13166S166TS5490TnonsynTcAAcT2110.04761916732-16734
ORF1ab/nsp13166S166del1S5490del1deltcAtc-14130.92857116732-16734
ORF1ab/nsp13166S166del1S5490del1delTcA-cN1410.071428616732-16734
ORF1ab/nsp13166S166PS5490PnonsynTcaCca66116732-16734
ORF1ab/nsp13166S166RS5490RnonsynTCaAGa33116732-16734
ORF1ab/nsp13166S166FS5490FnonsyntCAtTT22116732-16734
ORF1ab/nsp13166S166del2S5490del2deltCAt--210.516732-16734
ORF1ab/nsp13166S166del2S5490del2delTCa--a210.516732-16734
ORF1ab/nsp13166S166HS5490HnonsynTCACAT11116732-16734
ORF1ab/nsp13166S166CS5490CnonsyntCAtGT11116732-16734
ORF1ab/nsp13166S166KS5490KnonsynTCaAAa11116732-16734

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13166S166LtCatTa63136316All0.001207
ORF1ab/nsp13166S166LTCACTT26316All0
ORF1ab/nsp13166S166LTCACTG16316All0
ORF1ab/nsp13166S166LtCatTa24972497B.1.1.70.002235
ORF1ab/nsp13166S166StcAtcG592655All0.000113
ORF1ab/nsp13166S166StcAtcT44655All0.000008
ORF1ab/nsp13166S166StcAtcC18655All0.000003
ORF1ab/nsp13166S166STCAAGT1655All0
ORF1ab/nsp13166S166LtCatTa557557AY.30.00554
ORF1ab/nsp13166S166LtCatTa444444AY.40.000691
ORF1ab/nsp13166S166StcAtcG260260AY.360.038536
ORF1ab/nsp13166S166LtCatTa248248B.1.617.20.000934
ORF1ab/nsp13166S166LtCatTa201201AY.440.001223
ORF1ab/nsp13166S166LtCatTa196196B.1.20.001726
ORF1ab/nsp13166S166LtCatTa174174AY.250.001047
ORF1ab/nsp13166S166LtCatTa166166B.1.1600.005177
ORF1ab/nsp13166S166LtCatTa97100B.10.000888
ORF1ab/nsp13166S166LTCACTT2100B.10.000018
ORF1ab/nsp13166S166LTCACTG1100B.10.000009
ORF1ab/nsp13166S166LtCatTa8888AY.1030.000546
ORF1ab/nsp13166S166StcAtcG7480B.1.1.70.000066
ORF1ab/nsp13166S166StcAtcT480B.1.1.70.000004
ORF1ab/nsp13166S166StcAtcC280B.1.1.70.000002
ORF1ab/nsp13166S166LtCatTa7878AY.60.003208
ORF1ab/nsp13166S166delTCA---7777All0.000015
ORF1ab/nsp13166S166LtCatTa7676P.10.001197
ORF1ab/nsp13166S166LtCatTa6868B.1.595.10.397661
ORF1ab/nsp13166S166LtCatTa5656AY.1210.007578
ORF1ab/nsp13166S166LtCatTa5555AY.390.001359
ORF1ab/nsp13166S166LtCatTa5353AY.1130.007547
ORF1ab/nsp13166S166StcAtcG5151B.1.2420.962264
ORF1ab/nsp13166S166delTCA---4949B.1.1.70.000044
ORF1ab/nsp13166S166LtCatTa4848AY.430.000213
ORF1ab/nsp13166S166LtCatTa4848B.1.4290.001129
ORF1ab/nsp13166S166LtCatTa4848Q.80.007916
ORF1ab/nsp13166S166StcAtcT2447AY.40.000037
ORF1ab/nsp13166S166StcAtcG1947AY.40.00003
ORF1ab/nsp13166S166StcAtcC447AY.40.000006
ORF1ab/nsp13166S166LtCatTa4444B.1.10.000798
ORF1ab/nsp13166S166XtCatAa2730All0.000005
ORF1ab/nsp13166S166XtCatGa330All0.000001
ORF1ab/nsp13166S166ATcaGca2929All0.000006
ORF1ab/nsp13166S166LtCatTa2929AY.310.537037
ORF1ab/nsp13166S166StcAtcG2929AY.450.003529
ORF1ab/nsp13166S166LtCatTa2929B.1.1.5000.58
ORF1ab/nsp13166S166LtCatTa2929B.1.177.820.013842
ORF1ab/nsp13166S166LtCatTa2828B.1.1770.000369
ORF1ab/nsp13166S166LtCatTa2626B.1.2580.00173
ORF1ab/nsp13166S166LtCatTa2525AY.1020.000663
ORF1ab/nsp13166S166LtCatTa2525AY.1180.001566
ORF1ab/nsp13166S166LtCatTa2525B.1.2430.00174
ORF1ab/nsp13166S166LtCatTa2424B.1.5260.000564
ORF1ab/nsp13166S166TTcaAca1721All0.000003
ORF1ab/nsp13166S166TTcAAcG221All0
ORF1ab/nsp13166S166TTcAAcT121All0
ORF1ab/nsp13166S166TTcAAcC121All0
ORF1ab/nsp13166S166LtCatTa2121AY.4.20.000455
ORF1ab/nsp13166S166LtCatTa2121B.1.3510.000624
ORF1ab/nsp13166S166LtCatTa2121C.370.002437
ORF1ab/nsp13166S166StcAtcG1919AY.1030.000118
ORF1ab/nsp13166S166LtCatTa1919AY.420.000764
ORF1ab/nsp13166S166LtCatTa1919B.1.351.30.016652
ORF1ab/nsp13166S166LtCatTa1818AY.200.0007
ORF1ab/nsp13166S166StcAtcG1818B.1.1770.000237
ORF1ab/nsp13166S166LtCatTa1818B.1.5210.089552
ORF1ab/nsp13166S166LtCatTa1717AY.1200.000632
ORF1ab/nsp13166S166StcAtcG1616AY.440.000097
ORF1ab/nsp13166S166LtCatTa1616B.1.1.2220.003264
ORF1ab/nsp13166S166StcAtcG1216B.1.617.20.000045
ORF1ab/nsp13166S166StcAtcC316B.1.617.20.000011
ORF1ab/nsp13166S166StcAtcT116B.1.617.20.000004
ORF1ab/nsp13166S166LtCatTa1515B.1.1.3300.9375
ORF1ab/nsp13166S166del1tcAtc-1314All0.000002
ORF1ab/nsp13166S166del1TcA-cN114All0
ORF1ab/nsp13166S166StcAtcG1414AY.420.000563
ORF1ab/nsp13166S166LtCatTa1313AY.1000.000598
ORF1ab/nsp13166S166LtCatTa1313AY.1190.000459
ORF1ab/nsp13166S166LtCatTa1212AY.50.000248
ORF1ab/nsp13166S166LtCatTa1212AY.740.001388
ORF1ab/nsp13166S166LtCatTa1212B.1.1.5190.000477
ORF1ab/nsp13166S166LtCatTa1111B.1.1.370.002122
ORF1ab/nsp13166S166LtCatTa1111B.1.177.560.007343
ORF1ab/nsp13166S166ATcaGca1111B.60.010009
ORF1ab/nsp13166S166LtCatTa1010AY.3.10.000853
ORF1ab/nsp13166S166LtCatTa1010AY.330.000668
ORF1ab/nsp13166S166LtCatTa1010AY.90.000676
ORF1ab/nsp13166S166LtCatTa99AY.450.001095
ORF1ab/nsp13166S166LtCatTa99B.1.1.1890.013616
ORF1ab/nsp13166S166LtCatTa99B.1.360.001313
ORF1ab/nsp13166S166LtCatTa99B.1.5880.008189
ORF1ab/nsp13166S166LtCatTa99B.1.6200.008515
ORF1ab/nsp13166S166LtCatTa99Q.70.01
ORF1ab/nsp13166S166LtCatTa88AY.230.000558
ORF1ab/nsp13166S166StcAtcG88AY.250.000048
ORF1ab/nsp13166S166LtCatTa88AY.290.000126
ORF1ab/nsp13166S166LtCatTa88AY.340.000776
ORF1ab/nsp13166S166LtCatTa88AY.46.60.000578
ORF1ab/nsp13166S166XtCatAa88B.10.000073
ORF1ab/nsp13166S166LtCatTa88B.1.1.280.00249
ORF1ab/nsp13166S166LtCatTa88B.1.36.290.004139
ORF1ab/nsp13166S166LtCatTa88B.1.6370.000585
ORF1ab/nsp13166S166LtCatTa77AE.80.003423
ORF1ab/nsp13166S166LtCatTa77AY.130.001127
ORF1ab/nsp13166S166LtCatTa77AY.9.20.000257
ORF1ab/nsp13166S166LtCatTa77B.1.160.140.014831
ORF1ab/nsp13166S166LtCatTa77B.1.438.10.000751
ORF1ab/nsp13166S166LtCatTa77P.1.140.000335
ORF1ab/nsp13166S166delTCA---660.333333
ORF1ab/nsp13166S166LtCatTa66A0.002322
ORF1ab/nsp13166S166LtCatTa66A.2.50.002994
ORF1ab/nsp13166S166PTcaCca66All0.000001
ORF1ab/nsp13166S166LtCatTa66AY.260.00017
ORF1ab/nsp13166S166LtCatTa66AY.470.000187
ORF1ab/nsp13166S166LtCatTa66B.1.1.3040.016854
ORF1ab/nsp13166S166LtCatTa66B.1.177.570.001686
ORF1ab/nsp13166S166LtCatTa66B.1.2210.000426
ORF1ab/nsp13166S166LtCatTa66C.350.004644
ORF1ab/nsp13166S166LtCatTa55AY.140.00044
ORF1ab/nsp13166S166LtCatTa55AY.39.10.000198
ORF1ab/nsp13166S166StcAtcG25AY.430.000009
ORF1ab/nsp13166S166StcAtcT25AY.430.000009
ORF1ab/nsp13166S166StcAtcC15AY.430.000004
ORF1ab/nsp13166S166LtCatTa55AY.510.004545
ORF1ab/nsp13166S166LtCatTa55AY.550.004587
ORF1ab/nsp13166S166LtCatTa55AY.610.000524
ORF1ab/nsp13166S166LtCatTa55AY.980.000395
ORF1ab/nsp13166S166StcAtcG25B.1.10.000036
ORF1ab/nsp13166S166StcAtcC15B.1.10.000018
ORF1ab/nsp13166S166STCAAGT15B.1.10.000018
ORF1ab/nsp13166S166StcAtcT15B.1.10.000018
ORF1ab/nsp13166S166LtCatTa55B.1.1.2160.004452
ORF1ab/nsp13166S166StcAtcG55B.1.258.170.00052
ORF1ab/nsp13166S166LtCatTa55B.1.4270.000252
ORF1ab/nsp13166S166LtCatTa55B.1.5960.000436
ORF1ab/nsp13166S166LtCatTa55D.20.000375
ORF1ab/nsp13166S166LtCatTa55P.1.10.001588
ORF1ab/nsp13166S166LtCatTa44A.280.010582
ORF1ab/nsp13166S166LtCatTa44AY.1060.00134
ORF1ab/nsp13166S166LtCatTa44AY.1100.000451
ORF1ab/nsp13166S166LtCatTa44AY.120.10.001284
ORF1ab/nsp13166S166LtCatTa44AY.460.000416
ORF1ab/nsp13166S166LtCatTa44AY.98.10.000194
ORF1ab/nsp13166S166LtCatTa44B.1.1.2140.000222
ORF1ab/nsp13166S166del1tcAtc-44B.1.1.70.000004
ORF1ab/nsp13166S166LtCatTa44B.1.1.700.001364
ORF1ab/nsp13166S166StcAtcG44B.1.360.000584
ORF1ab/nsp13166S166LtCatTa44B.1.36.190.037037
ORF1ab/nsp13166S166LtCatTa44B.1.4280.004082
ORF1ab/nsp13166S166LtCatTa44B.1.4740.007605
ORF1ab/nsp13166S166LtCatTa44B.1.617.10.000516
ORF1ab/nsp13166S166LtCatTa44B.1.6210.000354
ORF1ab/nsp13166S166TTcaAca34P.10.000047
ORF1ab/nsp13166S166StcAtcG34P.10.000047
ORF1ab/nsp13166S166StcAtcC14P.10.000016
ORF1ab/nsp13166S166TTcAAcC14P.10.000016
ORF1ab/nsp13166S166StcAtcT44P.1.140.000191
ORF1ab/nsp13166S166RTCaAGa33All0.000001
ORF1ab/nsp13166S166StcAtcG33AY.1020.00008
ORF1ab/nsp13166S166LtCatTa33AY.1140.000693
ORF1ab/nsp13166S166LtCatTa33AY.1170.000254
ORF1ab/nsp13166S166LtCatTa33AY.120.2.10.001495
ORF1ab/nsp13166S166LtCatTa33AY.160.001139
ORF1ab/nsp13166S166LtCatTa33AY.270.000194
ORF1ab/nsp13166S166del1tcAtc-33AY.40.000005
ORF1ab/nsp13166S166LtCatTa33AY.750.000168
ORF1ab/nsp13166S166LtCatTa33B.1.1.100.003344
ORF1ab/nsp13166S166LtCatTa33B.1.1.1700.003741
ORF1ab/nsp13166S166ATcaGca33B.1.1.70.000003
ORF1ab/nsp13166S166LtCatTa33B.1.1110.003525
ORF1ab/nsp13166S166LtCatTa33B.1.1460.012712
ORF1ab/nsp13166S166del1tcAtc-23B.1.1770.000026
ORF1ab/nsp13166S166del1TcA-cN13B.1.1770.000013
ORF1ab/nsp13166S166LtCatTa33B.1.177.210.000229
ORF1ab/nsp13166S166LtCatTa33B.1.177.400.015464
ORF1ab/nsp13166S166LtCatTa33B.1.177.600.000655
ORF1ab/nsp13166S166LtCatTa33B.1.177.800.005736
ORF1ab/nsp13166S166LtCatTa33B.1.177.860.00055
ORF1ab/nsp13166S166LtCatTa33B.1.2340.000396
ORF1ab/nsp13166S166TTcaAca33B.1.2350.007557
ORF1ab/nsp13166S166StcAtcG33B.1.258.30.005025
ORF1ab/nsp13166S166StcAtcG33B.1.36.290.001552
ORF1ab/nsp13166S166LtCatTa33B.1.3670.002377
ORF1ab/nsp13166S166XtCatAa33B.1.3980.008929
ORF1ab/nsp13166S166LtCatTa33B.1.4000.001287
ORF1ab/nsp13166S166StcAtcG33B.1.5680.003333
ORF1ab/nsp13166S166LtCatTa33P.1.70.000958
ORF1ab/nsp13166S166TTcaAca23P.20.000373
ORF1ab/nsp13166S166TTcAAcG13P.20.000187
ORF1ab/nsp13166S166XtCatAa22A0.000774
ORF1ab/nsp13166S166delTCA---22AD.20.000438
ORF1ab/nsp13166S166FtCAtTT22All0
ORF1ab/nsp13166S166del2tCAt--12All0
ORF1ab/nsp13166S166del2TCa--a12All0
ORF1ab/nsp13166S166LtCatTa22AY.10.000791
ORF1ab/nsp13166S166StcAtcG22AY.1060.00067
ORF1ab/nsp13166S166StcAtcC12AY.1190.000035
ORF1ab/nsp13166S166StcAtcG12AY.1190.000035
ORF1ab/nsp13166S166ATcaGca22AY.350.000466
ORF1ab/nsp13166S166StcAtcG22AY.39.10.000079
ORF1ab/nsp13166S166LtCatTa22AY.4.50.000215
ORF1ab/nsp13166S166XtCatAa22AY.430.000009
ORF1ab/nsp13166S166LtCatTa22AY.46.20.001271
ORF1ab/nsp13166S166StcAtcG22AY.470.000062
ORF1ab/nsp13166S166LtCatTa22AY.540.000191
ORF1ab/nsp13166S166LtCatTa22AY.620.000871
ORF1ab/nsp13166S166LtCatTa22AY.7.10.000225
ORF1ab/nsp13166S166LtCatTa22AY.9.10.000167
ORF1ab/nsp13166S166TTcaAca12B.1.10.000018
ORF1ab/nsp13166S166TTcAAcT12B.1.10.000018
ORF1ab/nsp13166S166LtCatTa22B.1.1.10.000653
ORF1ab/nsp13166S166LtCatTa22B.1.1.1130.013986
ORF1ab/nsp13166S166LtCatTa22B.1.1.1610.007067
ORF1ab/nsp13166S166LtCatTa22B.1.1.2650.006309
ORF1ab/nsp13166S166LtCatTa22B.1.1.3060.000877
ORF1ab/nsp13166S166LtCatTa22B.1.1.3540.008772
ORF1ab/nsp13166S166LtCatTa22B.1.1.4160.00181
ORF1ab/nsp13166S166LtCatTa22B.1.1.460.008734
ORF1ab/nsp13166S166LtCatTa22B.1.130.004751
ORF1ab/nsp13166S166ATcaGca22B.1.1770.000026
ORF1ab/nsp13166S166delTCA---22B.1.1770.000026
ORF1ab/nsp13166S166LtCatTa22B.1.177.100.001756
ORF1ab/nsp13166S166LtCatTa22B.1.177.150.001262
ORF1ab/nsp13166S166LtCatTa22B.1.177.170.001642
ORF1ab/nsp13166S166LtCatTa22B.1.177.720.00678
ORF1ab/nsp13166S166LtCatTa22B.1.177.730.001133
ORF1ab/nsp13166S166StcAtcT12B.1.20.000009
ORF1ab/nsp13166S166StcAtcG12B.1.20.000009
ORF1ab/nsp13166S166LtCatTa22B.1.258.70.003824
ORF1ab/nsp13166S166LtCatTa22B.1.2800.014286
ORF1ab/nsp13166S166LtCatTa22B.1.36.10.002281
ORF1ab/nsp13166S166LtCatTa22B.1.3690.00057
ORF1ab/nsp13166S166LtCatTa22B.1.3990.003868
ORF1ab/nsp13166S166LtCatTa22B.1.4260.002018
ORF1ab/nsp13166S166LtCatTa22B.1.5170.000854
ORF1ab/nsp13166S166StcAtcG12B.1.5260.000024
ORF1ab/nsp13166S166StcAtcT12B.1.5260.000024
ORF1ab/nsp13166S166LtCatTa22B.1.5560.015038
ORF1ab/nsp13166S166StcAtcG22B.1.5650.001621
ORF1ab/nsp13166S166LtCatTa22B.1.5750.000607
ORF1ab/nsp13166S166ATcaGca22B.1.617.10.000258
ORF1ab/nsp13166S166TTcaAca22B.1.6210.000177
ORF1ab/nsp13166S166StcAtcG22B.1.6280.000705
ORF1ab/nsp13166S166StcAtcG22B.1.6370.000146
ORF1ab/nsp13166S166RTCaAGa22P.10.000032
ORF1ab/nsp13166S166XtCatAa12P.10.000016
ORF1ab/nsp13166S166XtCatGa12P.10.000016
ORF1ab/nsp13166S166StcAtcG22P.1.150.000465
ORF1ab/nsp13166S166TTcaAca12P.70.004367
ORF1ab/nsp13166S166TTcAAcG12P.70.004367
ORF1ab/nsp13166S166LtCatTa11A.10.000282
ORF1ab/nsp13166S166LtCatTa11A.2.40.003367
ORF1ab/nsp13166S166LtCatTa11A.230.010526
ORF1ab/nsp13166S166ATcaGca11A.23.10.000704
ORF1ab/nsp13166S166LtCatTa11AA.10.007246
ORF1ab/nsp13166S166HTCACAT11All0
ORF1ab/nsp13166S166KTCaAAa11All0
ORF1ab/nsp13166S166CtCAtGT11All0
ORF1ab/nsp13166S166StcAtcG11AY.1010.00049
ORF1ab/nsp13166S166StcAtcG11AY.1050.000643
ORF1ab/nsp13166S166StcAtcG11AY.1100.000113
ORF1ab/nsp13166S166StcAtcG11AY.1110.000183
ORF1ab/nsp13166S166LtCatTa11AY.1160.000287
ORF1ab/nsp13166S166LtCatTa11AY.120.000316
ORF1ab/nsp13166S166delTCA---11AY.1200.000037
ORF1ab/nsp13166S166StcAtcT11AY.120.20.001285
ORF1ab/nsp13166S166StcAtcC11AY.130.000161
ORF1ab/nsp13166S166del2TCa--a11AY.160.00038
ORF1ab/nsp13166S166StcAtcG11AY.160.00038
ORF1ab/nsp13166S166StcAtcG11AY.230.00007
ORF1ab/nsp13166S166delTCA---11AY.240.000431
ORF1ab/nsp13166S166LtCatTa11AY.240.000431
ORF1ab/nsp13166S166TTcaAca11AY.250.000006
ORF1ab/nsp13166S166delTCA---11AY.250.000006
ORF1ab/nsp13166S166LtCatTa11AY.280.00189
ORF1ab/nsp13166S166StcAtcG11AY.30.00001
ORF1ab/nsp13166S166XtCatGa11AY.330.000067
ORF1ab/nsp13166S166LtCatTa11AY.34.10.00051
ORF1ab/nsp13166S166LtCatTa11AY.350.000233
ORF1ab/nsp13166S166ATcaGca11AY.390.000025
ORF1ab/nsp13166S166StcAtcG11AY.390.000025
ORF1ab/nsp13166S166ATcaGca11AY.40.000002
ORF1ab/nsp13166S166PTcaCca11AY.40.000002
ORF1ab/nsp13166S166StcAtcT11AY.4.20.000022
ORF1ab/nsp13166S166LtCatTa11AY.4.2.10.000149
ORF1ab/nsp13166S166delTCA---11AY.4.50.000107
ORF1ab/nsp13166S166del1tcAtc-11AY.4.50.000107
ORF1ab/nsp13166S166LtCatTa11AY.410.000294
ORF1ab/nsp13166S166ATcaGca11AY.430.000004
ORF1ab/nsp13166S166delTCA---11AY.430.000004
ORF1ab/nsp13166S166delTCA---11AY.46.20.000635
ORF1ab/nsp13166S166LtCatTa11AY.46.30.000934
ORF1ab/nsp13166S166StcAtcG11AY.46.30.000934
ORF1ab/nsp13166S166StcAtcG11AY.46.60.000072
ORF1ab/nsp13166S166LtCatTa11AY.5.40.000277
ORF1ab/nsp13166S166XtCatAa11AY.520.000814
ORF1ab/nsp13166S166LtCatTa11AY.570.000656
ORF1ab/nsp13166S166StcAtcT11AY.60.000041
ORF1ab/nsp13166S166StcAtcT11AY.610.000105
ORF1ab/nsp13166S166PTcaCca11AY.670.000464
ORF1ab/nsp13166S166StcAtcG11AY.750.000056
ORF1ab/nsp13166S166LtCatTa11AY.770.001127
ORF1ab/nsp13166S166LtCatTa11AY.790.001211
ORF1ab/nsp13166S166LtCatTa11AY.820.001357
ORF1ab/nsp13166S166LtCatTa11AY.840.000437
ORF1ab/nsp13166S166LtCatTa11AY.870.000833
ORF1ab/nsp13166S166StcAtcT11AY.9.10.000084
ORF1ab/nsp13166S166StcAtcG11AY.9.20.000037
ORF1ab/nsp13166S166LtCatTa11AY.920.000287
ORF1ab/nsp13166S166LtCatTa11AY.940.000443
ORF1ab/nsp13166S166TTcaAca11AY.980.000079
ORF1ab/nsp13166S166delTCA---11AY.99.10.001553
ORF1ab/nsp13166S166LtCatTa11AY.99.20.000092
ORF1ab/nsp13166S166delTCA---11AZ.20.000821
ORF1ab/nsp13166S166LtCatTa11AZ.20.000821
ORF1ab/nsp13166S166XtCatAa11B0.000128
ORF1ab/nsp13166S166TTcaAca11B.10.000009
ORF1ab/nsp13166S166ATcaGca11B.10.000009
ORF1ab/nsp13166S166StcAtcT11B.10.000009
ORF1ab/nsp13166S166RTCaAGa11B.1.10.000018
ORF1ab/nsp13166S166XtCatGa11B.1.10.000018
ORF1ab/nsp13166S166CtCAtGT11B.1.10.000018
ORF1ab/nsp13166S166StcAtcG11B.1.1.10.000327
ORF1ab/nsp13166S166LtCatTa11B.1.1.1570.000913
ORF1ab/nsp13166S166StcAtcG11B.1.1.1700.001247
ORF1ab/nsp13166S166LtCatTa11B.1.1.1710.003676
ORF1ab/nsp13166S166LtCatTa11B.1.1.1980.001468
ORF1ab/nsp13166S166StcAtcG11B.1.1.2160.00089
ORF1ab/nsp13166S166LtCatTa11B.1.1.2170.003636
ORF1ab/nsp13166S166LtCatTa11B.1.1.2200.001859
ORF1ab/nsp13166S166LtCatTa11B.1.1.3050.003861
ORF1ab/nsp13166S166LtCatTa11B.1.1.3110.000358
ORF1ab/nsp13166S166LtCatTa11B.1.1.3120.001912
ORF1ab/nsp13166S166delTCA---11B.1.1.3150.008475
ORF1ab/nsp13166S166LtCatTa11B.1.1.3260.001761
ORF1ab/nsp13166S166LtCatTa11B.1.1.330.000421
ORF1ab/nsp13166S166LtCatTa11B.1.1.3710.010417
ORF1ab/nsp13166S166LtCatTa11B.1.1.3890.006061
ORF1ab/nsp13166S166LtCatTa11B.1.1.3970.002252
ORF1ab/nsp13166S166LtCatTa11B.1.1.4340.000349
ORF1ab/nsp13166S166LtCatTa11B.1.1.4660.008696
ORF1ab/nsp13166S166LtCatTa11B.1.1.500.000679
ORF1ab/nsp13166S166LtCatTa11B.1.1.510.001718
ORF1ab/nsp13166S166LtCatTa11B.1.1.5230.001563
ORF1ab/nsp13166S166LtCatTa11B.1.1.5260.003546
ORF1ab/nsp13166S166LtCatTa11B.1.1.630.000386
ORF1ab/nsp13166S166HTCACAT11B.1.1.70.000001
ORF1ab/nsp13166S166del2tCAt--11B.1.1.70.000001
ORF1ab/nsp13166S166PTcaCca11B.1.1.70.000001
ORF1ab/nsp13166S166StcAtcC11B.1.1.700.000341
ORF1ab/nsp13166S166LtCatTa11B.1.1.770.041667
ORF1ab/nsp13166S166XtCatAa11B.1.1110.001175
ORF1ab/nsp13166S166LtCatTa11B.1.1190.010526
ORF1ab/nsp13166S166StcAtcG11B.1.1600.000031
ORF1ab/nsp13166S166PTcaCca11B.1.1770.000013
ORF1ab/nsp13166S166XtCatAa11B.1.1770.000013
ORF1ab/nsp13166S166LtCatTa11B.1.177.120.000152
ORF1ab/nsp13166S166StcAtcC11B.1.177.150.000631
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.160.000664
ORF1ab/nsp13166S166delTCA---11B.1.177.170.000821
ORF1ab/nsp13166S166StcAtcG11B.1.177.210.000076
ORF1ab/nsp13166S166StcAtcG11B.1.177.350.000691
ORF1ab/nsp13166S166LtCatTa11B.1.177.40.000211
ORF1ab/nsp13166S166LtCatTa11B.1.177.450.000381
ORF1ab/nsp13166S166LtCatTa11B.1.177.50.001242
ORF1ab/nsp13166S166LtCatTa11B.1.177.520.001757
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.540.000606
ORF1ab/nsp13166S166LtCatTa11B.1.177.540.000606
ORF1ab/nsp13166S166ATcaGca11B.1.177.70.000165
ORF1ab/nsp13166S166delTCA---11B.1.177.730.000566
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.760.002494
ORF1ab/nsp13166S166LtCatTa11B.1.177.810.000189
ORF1ab/nsp13166S166delTCA---11B.1.177.830.001481
ORF1ab/nsp13166S166LtCatTa11B.1.177.850.005435
ORF1ab/nsp13166S166LtCatTa11B.1.177.870.000728
ORF1ab/nsp13166S166LtCatTa11B.1.1990.004132
ORF1ab/nsp13166S166LtCatTa11B.1.2100.002132
ORF1ab/nsp13166S166LtCatTa11B.1.2360.002053
ORF1ab/nsp13166S166StcAtcG11B.1.2370.004975
ORF1ab/nsp13166S166LtCatTa11B.1.2390.001221
ORF1ab/nsp13166S166StcAtcG11B.1.2400.000216
ORF1ab/nsp13166S166FtCAtTT11B.1.2420.018868
ORF1ab/nsp13166S166delTCA---11B.1.2420.018868
ORF1ab/nsp13166S166StcAtcC11B.1.2430.00007
ORF1ab/nsp13166S166delTCA---11B.1.2580.000067
ORF1ab/nsp13166S166delTCA---11B.1.258.100.011364
ORF1ab/nsp13166S166LtCatTa11B.1.258.170.000104
ORF1ab/nsp13166S166LtCatTa11B.1.258.220.002667
ORF1ab/nsp13166S166XtCatAa11B.1.3010.005917
ORF1ab/nsp13166S166LtCatTa11B.1.3140.007519
ORF1ab/nsp13166S166LtCatTa11B.1.3190.003049
ORF1ab/nsp13166S166LtCatTa11B.1.3290.000608
ORF1ab/nsp13166S166LtCatTa11B.1.3440.008197
ORF1ab/nsp13166S166ATcaGca11B.1.3510.00003
ORF1ab/nsp13166S166LtCatTa11B.1.351.20.000303
ORF1ab/nsp13166S166XtCatAa11B.1.351.30.000876
ORF1ab/nsp13166S166LtCatTa11B.1.351.50.0006
ORF1ab/nsp13166S166LtCatTa11B.1.3560.001727
ORF1ab/nsp13166S166LtCatTa11B.1.36.220.001208
ORF1ab/nsp13166S166LtCatTa11B.1.36.370.002778
ORF1ab/nsp13166S166LtCatTa11B.1.36.380.001642
ORF1ab/nsp13166S166LtCatTa11B.1.36.80.001
ORF1ab/nsp13166S166LtCatTa11B.1.3710.001122
ORF1ab/nsp13166S166LtCatTa11B.1.3750.00082
ORF1ab/nsp13166S166LtCatTa11B.1.3780.006849
ORF1ab/nsp13166S166LtCatTa11B.1.3960.000706
ORF1ab/nsp13166S166LtCatTa11B.1.4200.010417
ORF1ab/nsp13166S166StcAtcG11B.1.4270.00005
ORF1ab/nsp13166S166StcAtcG11B.1.4290.000024
ORF1ab/nsp13166S166LtCatTa11B.1.4590.004082
ORF1ab/nsp13166S166LtCatTa11B.1.4620.007246
ORF1ab/nsp13166S166LtCatTa11B.1.4650.003802
ORF1ab/nsp13166S166LtCatTa11B.1.466.20.000391
ORF1ab/nsp13166S166LtCatTa11B.1.4800.002488
ORF1ab/nsp13166S166LtCatTa11B.1.5250.000113
ORF1ab/nsp13166S166LtCatTa11B.1.5330.009615
ORF1ab/nsp13166S166LtCatTa11B.1.5510.00129
ORF1ab/nsp13166S166LtCatTa11B.1.5540.004405
ORF1ab/nsp13166S166LtCatTa11B.1.5580.004566
ORF1ab/nsp13166S166LtCatTa11B.1.5640.000426
ORF1ab/nsp13166S166LtCatTa11B.1.5700.002941
ORF1ab/nsp13166S166LtCatTa11B.1.575.10.002439
ORF1ab/nsp13166S166LtCatTa11B.1.5760.000907
ORF1ab/nsp13166S166LtCatTa11B.1.5770.000687
ORF1ab/nsp13166S166PTcaCca11B.1.5820.000491
ORF1ab/nsp13166S166XtCatAa11B.1.5960.000087
ORF1ab/nsp13166S166StcAtcG11B.1.60.017241
ORF1ab/nsp13166S166StcAtcG11B.1.6090.000479
ORF1ab/nsp13166S166XtCatAa11B.1.617.10.000129
ORF1ab/nsp13166S166FtCAtTT11B.1.617.10.000129
ORF1ab/nsp13166S166XtCatAa11B.1.617.20.000004
ORF1ab/nsp13166S166ATcaGca11B.1.617.20.000004
ORF1ab/nsp13166S166PTcaCca11B.1.617.20.000004
ORF1ab/nsp13166S166delTCA---11B.1.617.20.000004
ORF1ab/nsp13166S166ATcaGca11B.1.619.10.000641
ORF1ab/nsp13166S166delTCA---11B.1.621.10.000506
ORF1ab/nsp13166S166XtCatAa11B.1.6230.000536
ORF1ab/nsp13166S166LtCatTa11B.1.6270.00202
ORF1ab/nsp13166S166LtCatTa11B.1.6280.000352
ORF1ab/nsp13166S166LtCatTa11B.1.6360.006711
ORF1ab/nsp13166S166LtCatTa11B.400.000364
ORF1ab/nsp13166S166LtCatTa11B.60.00091
ORF1ab/nsp13166S166TTcaAca11B.6.60.000889
ORF1ab/nsp13166S166LtCatTa11C.180.002591
ORF1ab/nsp13166S166LtCatTa11C.190.027027
ORF1ab/nsp13166S166StcAtcC11N.40.004255
ORF1ab/nsp13166S166LtCatTa11N.60.007092
ORF1ab/nsp13166S166KTCaAAa11P.10.000016
ORF1ab/nsp13166S166StcAtcG11P.1.120.000484
ORF1ab/nsp13166S166LtCatTa11P.1.130.000898
ORF1ab/nsp13166S166XtCatAa11P.1.150.000232
ORF1ab/nsp13166S166LtCatTa11P.1.170.000162
ORF1ab/nsp13166S166TTcaAca11P.1.20.001156
ORF1ab/nsp13166S166LtCatTa11P.20.000187
ORF1ab/nsp13166S166StcAtcG11P.20.000187
ORF1ab/nsp13166S166LtCatTa11P.30.001595
ORF1ab/nsp13166S166StcAtcG11P.70.004367
ORF1ab/nsp13166S166LtCatTa11Q.10.000126
ORF1ab/nsp13166S166LtCatTa11Q.30.000145
ORF1ab/nsp13166S166LtCatTa11Q.40.000455
ORF1ab/nsp13166S166delTCA---11Q.80.000165
ORF1ab/nsp13166S166LtCatTa11R.10.00009