CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 151

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13151I151VI5475VnonsynAttGtt25932593116687-16689
ORF1ab/nsp13151I151SI5475SnonsynaTtaGt3213190.99376916687-16689
ORF1ab/nsp13151I151SI5475SnonsynaTTaGC32110.0031152616687-16689
ORF1ab/nsp13151I151SI5475SnonsynATtTCt32110.0031152616687-16689
ORF1ab/nsp13151I151II5475IsynatTatA1881050.55851116687-16689
ORF1ab/nsp13151I151II5475IsynatTatC188830.44148916687-16689
ORF1ab/nsp13151I151delI5475deldelATT---103103116687-16689
ORF1ab/nsp13151I151TI5475TnonsynaTtaCt43410.95348816687-16689
ORF1ab/nsp13151I151TI5475TnonsynaTTaCA4320.046511616687-16689
ORF1ab/nsp13151I151LI5475LnonsynAttCtt17130.76470616687-16689
ORF1ab/nsp13151I151LI5475LnonsynAtTCtG1720.11764716687-16689
ORF1ab/nsp13151I151LI5475LnonsynAtTCtC1720.11764716687-16689
ORF1ab/nsp13151I151FI5475FnonsynAttTtt77116687-16689
ORF1ab/nsp13151I151del1I5475del1delAtt-tt630.516687-16689
ORF1ab/nsp13151I151del1I5475del1delAtT-tN610.16666716687-16689
ORF1ab/nsp13151I151del1I5475del1delatTat-610.16666716687-16689
ORF1ab/nsp13151I151del1I5475del1delATT-NN610.16666716687-16689
ORF1ab/nsp13151I151MI5475MnonsynatTatG44116687-16689
ORF1ab/nsp13151I151NI5475NnonsynaTtaAt22116687-16689
ORF1ab/nsp13151I151DI5475DnonsynATtGAt22116687-16689
ORF1ab/nsp13151I151PI5475PnonsynATtCCt11116687-16689
ORF1ab/nsp13151I151RI5475RnonsynaTTaGG11116687-16689
ORF1ab/nsp13151I151QI5475QnonsynATTCAG11116687-16689

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13151I151VAttGtt25932593All0.000496
ORF1ab/nsp13151I151VAttGtt11301130B.1.351.30.990359
ORF1ab/nsp13151I151SaTtaGt319321All0.000061
ORF1ab/nsp13151I151SATtTCt1321All0
ORF1ab/nsp13151I151SaTTaGC1321All0
ORF1ab/nsp13151I151VAttGtt318318B.1.617.20.001197
ORF1ab/nsp13151I151SaTtaGt289289AY.40.00045
ORF1ab/nsp13151I151IatTatA105188All0.00002
ORF1ab/nsp13151I151IatTatC83188All0.000016
ORF1ab/nsp13151I151VAttGtt104104AY.330.006945
ORF1ab/nsp13151I151VAttGtt104104AY.430.000461
ORF1ab/nsp13151I151delATT---103103All0.00002
ORF1ab/nsp13151I151VAttGtt101101AY.40.000157
ORF1ab/nsp13151I151VAttGtt7070B.1.1.70.000063
ORF1ab/nsp13151I151delATT---6464B.1.1.70.000057
ORF1ab/nsp13151I151VAttGtt6363AY.250.000379
ORF1ab/nsp13151I151VAttGtt5858B.1.351.20.017549
ORF1ab/nsp13151I151VAttGtt5656AY.1030.000348
ORF1ab/nsp13151I151IatTatA4453AY.40.000068
ORF1ab/nsp13151I151IatTatC953AY.40.000014
ORF1ab/nsp13151I151TaTtaCt4143All0.000008
ORF1ab/nsp13151I151TaTTaCA243All0
ORF1ab/nsp13151I151VAttGtt3737B.1.3510.0011
ORF1ab/nsp13151I151VAttGtt3636AY.440.000219
ORF1ab/nsp13151I151VAttGtt3636B.1.6370.002631
ORF1ab/nsp13151I151VAttGtt2929AY.4.40.011866
ORF1ab/nsp13151I151VAttGtt2828AY.750.001569
ORF1ab/nsp13151I151VAttGtt2727AY.39.10.00107
ORF1ab/nsp13151I151VAttGtt2424B.1.5700.070588
ORF1ab/nsp13151I151VAttGtt2323AY.390.000568
ORF1ab/nsp13151I151VAttGtt2222AY.260.000623
ORF1ab/nsp13151I151IatTatC2222B.1.5260.000517
ORF1ab/nsp13151I151IatTatA1521AY.430.000066
ORF1ab/nsp13151I151IatTatC621AY.430.000027
ORF1ab/nsp13151I151VAttGtt2121B.10.000192
ORF1ab/nsp13151I151TaTtaCt1818B.1.1.70.000016
ORF1ab/nsp13151I151LAttCtt1317All0.000002
ORF1ab/nsp13151I151LAtTCtG217All0
ORF1ab/nsp13151I151LAtTCtC217All0
ORF1ab/nsp13151I151VAttGtt1616AY.30.000159
ORF1ab/nsp13151I151VAttGtt1616AY.470.000498
ORF1ab/nsp13151I151VAttGtt1515B.1.3980.044643
ORF1ab/nsp13151I151IatTatA1315B.1.617.20.000049
ORF1ab/nsp13151I151IatTatC215B.1.617.20.000008
ORF1ab/nsp13151I151VAttGtt1414AY.320.007455
ORF1ab/nsp13151I151VAttGtt1414B.1.10.000254
ORF1ab/nsp13151I151delATT---1414B.1.1770.000184
ORF1ab/nsp13151I151VAttGtt1111AY.1020.000292
ORF1ab/nsp13151I151IatTatA1010AY.1170.000845
ORF1ab/nsp13151I151SaTtaGt1010B.1.1.70.000009
ORF1ab/nsp13151I151IatTatC710B.1.1.70.000006
ORF1ab/nsp13151I151IatTatA310B.1.1.70.000003
ORF1ab/nsp13151I151VAttGtt99B.1.1.280.002801
ORF1ab/nsp13151I151VAttGtt99B.1.20.000079
ORF1ab/nsp13151I151IatTatC58B.1.20.000044
ORF1ab/nsp13151I151IatTatA38B.1.20.000026
ORF1ab/nsp13151I151FAttTtt77All0.000001
ORF1ab/nsp13151I151VAttGtt77AY.1190.000247
ORF1ab/nsp13151I151LAttCtt77AY.30.00007
ORF1ab/nsp13151I151VAttGtt77AY.50.000145
ORF1ab/nsp13151I151VAttGtt77B.1.2580.000466
ORF1ab/nsp13151I151VAttGtt77B.1.4270.000353
ORF1ab/nsp13151I151VAttGtt77B.1.4290.000165
ORF1ab/nsp13151I151SaTtaGt77B.1.617.20.000026
ORF1ab/nsp13151I151VAttGtt77P.10.00011
ORF1ab/nsp13151I151LAtTCtG260.111111
ORF1ab/nsp13151I151LAtTCtC260.111111
ORF1ab/nsp13151I151LAttCtt260.111111
ORF1ab/nsp13151I151del1Att-tt36All0.000001
ORF1ab/nsp13151I151del1AtT-tN16All0
ORF1ab/nsp13151I151del1atTat-16All0
ORF1ab/nsp13151I151del1ATT-NN16All0
ORF1ab/nsp13151I151VAttGtt66B0.000767
ORF1ab/nsp13151I151VAttGtt66B.1.1.2690.008119
ORF1ab/nsp13151I151VAttGtt66B.1.5260.000141
ORF1ab/nsp13151I151VAttGtt66C.380.048387
ORF1ab/nsp13151I151TaTtaCt55A0.001935
ORF1ab/nsp13151I151VAttGtt55AY.230.000349
ORF1ab/nsp13151I151VAttGtt55B.1.2430.000348
ORF1ab/nsp13151I151VAttGtt55B.1.3570.047619
ORF1ab/nsp13151I151delATT---44AD.20.000876
ORF1ab/nsp13151I151MatTatG44All0.000001
ORF1ab/nsp13151I151VAttGtt44AY.1130.00057
ORF1ab/nsp13151I151IatTatA34AY.390.000074
ORF1ab/nsp13151I151IatTatC14AY.390.000025
ORF1ab/nsp13151I151IatTatC44AY.440.000024
ORF1ab/nsp13151I151VAttGtt44AY.840.00175
ORF1ab/nsp13151I151VAttGtt44AY.980.000316
ORF1ab/nsp13151I151VAttGtt44B.1.1.3060.001754
ORF1ab/nsp13151I151VAttGtt44B.1.1770.000053
ORF1ab/nsp13151I151VAttGtt44B.1.177.40.000844
ORF1ab/nsp13151I151IatTatA23AY.1020.000053
ORF1ab/nsp13151I151IatTatC13AY.1020.000027
ORF1ab/nsp13151I151VAttGtt33AY.1200.000112
ORF1ab/nsp13151I151VAttGtt33AY.120.10.000963
ORF1ab/nsp13151I151VAttGtt33AY.130.000483
ORF1ab/nsp13151I151VAttGtt33AY.200.000117
ORF1ab/nsp13151I151IatTatC23AY.30.00002
ORF1ab/nsp13151I151IatTatA13AY.30.00001
ORF1ab/nsp13151I151TaTtaCt33AY.370.000948
ORF1ab/nsp13151I151VAttGtt33AY.420.000121
ORF1ab/nsp13151I151SaTtaGt33AY.430.000013
ORF1ab/nsp13151I151VAttGtt33AY.450.000365
ORF1ab/nsp13151I151TaTtaCt33AY.60.000123
ORF1ab/nsp13151I151VAttGtt33AY.98.10.000145
ORF1ab/nsp13151I151VAttGtt33B.1.1.2430.012245
ORF1ab/nsp13151I151VAttGtt33B.1.1.3740.007126
ORF1ab/nsp13151I151IatTatA33B.1.1770.00004
ORF1ab/nsp13151I151IatTatC33B.1.177.170.002463
ORF1ab/nsp13151I151VAttGtt33B.1.177.560.002003
ORF1ab/nsp13151I151FAttTtt33B.1.36.80.003
ORF1ab/nsp13151I151delATT---220.111111
ORF1ab/nsp13151I151DATtGAt220.111111
ORF1ab/nsp13151I151TaTTaCA220.111111
ORF1ab/nsp13151I151VAttGtt220.111111
ORF1ab/nsp13151I151NaTtaAt22All0
ORF1ab/nsp13151I151DATtGAt22All0
ORF1ab/nsp13151I151VAttGtt22AY.290.000032
ORF1ab/nsp13151I151VAttGtt22AY.300.000791
ORF1ab/nsp13151I151VAttGtt22AY.340.000194
ORF1ab/nsp13151I151VAttGtt22AY.4.20.000043
ORF1ab/nsp13151I151SaTtaGt22AY.440.000012
ORF1ab/nsp13151I151VAttGtt22AY.940.000885
ORF1ab/nsp13151I151delATT---22B.10.000018
ORF1ab/nsp13151I151delATT---22B.1.10.000036
ORF1ab/nsp13151I151SATtTCt12B.1.10.000018
ORF1ab/nsp13151I151SaTtaGt12B.1.10.000018
ORF1ab/nsp13151I151IatTatC22B.1.1.2200.003717
ORF1ab/nsp13151I151IatTatC22B.1.1.2430.008163
ORF1ab/nsp13151I151VAttGtt22B.1.1.5190.000079
ORF1ab/nsp13151I151VAttGtt22B.1.110.30.001437
ORF1ab/nsp13151I151VAttGtt22B.1.1600.000062
ORF1ab/nsp13151I151SaTtaGt22B.1.177.850.01087
ORF1ab/nsp13151I151TaTtaCt22B.1.2580.000133
ORF1ab/nsp13151I151IatTatC22B.1.2580.000133
ORF1ab/nsp13151I151VAttGtt22B.1.6210.000177
ORF1ab/nsp13151I151TaTtaCt22B.1.6280.000705
ORF1ab/nsp13151I151IatTatA22B.1.6370.000146
ORF1ab/nsp13151I151IatTatC22B.400.000729
ORF1ab/nsp13151I151IatTatA22P.1.140.000096
ORF1ab/nsp13151I151IatTatA11A0.000387
ORF1ab/nsp13151I151VAttGtt11A.10.000282
ORF1ab/nsp13151I151VAttGtt11A.2.50.000499
ORF1ab/nsp13151I151QATTCAG11All0
ORF1ab/nsp13151I151RaTTaGG11All0
ORF1ab/nsp13151I151PATtCCt11All0
ORF1ab/nsp13151I151VAttGtt11AY.10.000396
ORF1ab/nsp13151I151VAttGtt11AY.1000.000046
ORF1ab/nsp13151I151VAttGtt11AY.1010.00049
ORF1ab/nsp13151I151IatTatC11AY.1030.000006
ORF1ab/nsp13151I151TaTtaCt11AY.1030.000006
ORF1ab/nsp13151I151IatTatC11AY.1060.000335
ORF1ab/nsp13151I151VAttGtt11AY.1060.000335
ORF1ab/nsp13151I151VAttGtt11AY.1080.001103
ORF1ab/nsp13151I151VAttGtt11AY.1090.00074
ORF1ab/nsp13151I151VAttGtt11AY.110.001339
ORF1ab/nsp13151I151IatTatC11AY.1200.000037
ORF1ab/nsp13151I151VAttGtt11AY.1210.000135
ORF1ab/nsp13151I151VAttGtt11AY.140.000088
ORF1ab/nsp13151I151VAttGtt11AY.160.00038
ORF1ab/nsp13151I151del1atTat-11AY.160.00038
ORF1ab/nsp13151I151VAttGtt11AY.16.10.00047
ORF1ab/nsp13151I151VAttGtt11AY.190.00114
ORF1ab/nsp13151I151IatTatC11AY.230.00007
ORF1ab/nsp13151I151VAttGtt11AY.23.10.000417
ORF1ab/nsp13151I151delATT---11AY.240.000431
ORF1ab/nsp13151I151IatTatC11AY.270.000065
ORF1ab/nsp13151I151del1AtT-tN11AY.40.000002
ORF1ab/nsp13151I151VAttGtt11AY.4.2.10.000149
ORF1ab/nsp13151I151LAttCtt11AY.440.000006
ORF1ab/nsp13151I151SaTtaGt11AY.450.000122
ORF1ab/nsp13151I151VAttGtt11AY.460.000104
ORF1ab/nsp13151I151VAttGtt11AY.46.10.001027
ORF1ab/nsp13151I151VAttGtt11AY.46.30.000934
ORF1ab/nsp13151I151del1Att-tt11AY.46.40.000165
ORF1ab/nsp13151I151TaTtaCt11AY.470.000031
ORF1ab/nsp13151I151SaTtaGt11AY.50.000021
ORF1ab/nsp13151I151VAttGtt11AY.5.40.000277
ORF1ab/nsp13151I151VAttGtt11AY.520.000814
ORF1ab/nsp13151I151PATtCCt11AY.590.00053
ORF1ab/nsp13151I151IatTatC11AY.60.000041
ORF1ab/nsp13151I151MatTatG11AY.690.000187
ORF1ab/nsp13151I151VAttGtt11AY.70.000196
ORF1ab/nsp13151I151IatTatA11AY.850.000427
ORF1ab/nsp13151I151VAttGtt11AY.90.000068
ORF1ab/nsp13151I151SaTtaGt11AY.9.20.000037
ORF1ab/nsp13151I151VAttGtt11AY.920.000287
ORF1ab/nsp13151I151IatTatA11AY.920.000287
ORF1ab/nsp13151I151LAttCtt11AY.98.10.000048
ORF1ab/nsp13151I151IatTatC11AY.99.20.000092
ORF1ab/nsp13151I151delATT---11AZ.20.000821
ORF1ab/nsp13151I151IatTatC11B.10.000009
ORF1ab/nsp13151I151FAttTtt11B.1.10.000018
ORF1ab/nsp13151I151IatTatA11B.1.10.000018
ORF1ab/nsp13151I151MatTatG11B.1.10.000018
ORF1ab/nsp13151I151RaTTaGG11B.1.10.000018
ORF1ab/nsp13151I151LAttCtt11B.1.1.1760.000439
ORF1ab/nsp13151I151delATT---11B.1.1.2310.003096
ORF1ab/nsp13151I151IatTatC11B.1.1.250.000569
ORF1ab/nsp13151I151VAttGtt11B.1.1.2730.006757
ORF1ab/nsp13151I151TaTtaCt11B.1.1.2840.000107
ORF1ab/nsp13151I151TaTtaCt11B.1.1.2890.002083
ORF1ab/nsp13151I151delATT---11B.1.1.3050.003861
ORF1ab/nsp13151I151delATT---11B.1.1.3060.000438
ORF1ab/nsp13151I151delATT---11B.1.1.3150.008475
ORF1ab/nsp13151I151SaTtaGt11B.1.1.3690.000446
ORF1ab/nsp13151I151MatTatG11B.1.1.370.000193
ORF1ab/nsp13151I151delATT---11B.1.1.440.00241
ORF1ab/nsp13151I151LAttCtt11B.1.1.70.000001
ORF1ab/nsp13151I151NaTtaAt11B.1.1.70.000001
ORF1ab/nsp13151I151MatTatG11B.1.1.70.000001
ORF1ab/nsp13151I151VAttGtt11B.1.1420.002899
ORF1ab/nsp13151I151delATT---11B.1.160.170.001701
ORF1ab/nsp13151I151delATT---11B.1.160.230.004831
ORF1ab/nsp13151I151NaTtaAt11B.1.1770.000013
ORF1ab/nsp13151I151del1ATT-NN11B.1.1770.000013
ORF1ab/nsp13151I151VAttGtt11B.1.177.440.000519
ORF1ab/nsp13151I151VAttGtt11B.1.177.600.000218
ORF1ab/nsp13151I151delATT---11B.1.177.730.000566
ORF1ab/nsp13151I151delATT---11B.1.177.830.001481
ORF1ab/nsp13151I151TaTtaCt11B.1.20.000009
ORF1ab/nsp13151I151del1Att-tt11B.1.2340.000132
ORF1ab/nsp13151I151delATT---11B.1.2420.018868
ORF1ab/nsp13151I151TaTtaCt11B.1.2770.02381
ORF1ab/nsp13151I151VAttGtt11B.1.3260.007576
ORF1ab/nsp13151I151VAttGtt11B.1.360.000146
ORF1ab/nsp13151I151delATT---11B.1.360.000146
ORF1ab/nsp13151I151IatTatC11B.1.36.360.000602
ORF1ab/nsp13151I151FAttTtt11B.1.36.390.002217
ORF1ab/nsp13151I151TaTtaCt11B.1.4270.00005
ORF1ab/nsp13151I151VAttGtt11B.1.4430.004673
ORF1ab/nsp13151I151delATT---11B.1.4970.000315
ORF1ab/nsp13151I151TaTtaCt11B.1.5510.00129
ORF1ab/nsp13151I151VAttGtt11B.1.5540.004405
ORF1ab/nsp13151I151VAttGtt11B.1.5650.00081
ORF1ab/nsp13151I151VAttGtt11B.1.5770.000687
ORF1ab/nsp13151I151IatTatC11B.1.5800.004065
ORF1ab/nsp13151I151VAttGtt11B.1.5950.000261
ORF1ab/nsp13151I151VAttGtt11B.1.6090.000479
ORF1ab/nsp13151I151VAttGtt11B.1.617.10.000129
ORF1ab/nsp13151I151IatTatC11B.1.619.10.000641
ORF1ab/nsp13151I151VAttGtt11B.1.6200.000946
ORF1ab/nsp13151I151del1Att-tt11B.1.6370.000073
ORF1ab/nsp13151I151FAttTtt11B.1.90.006173
ORF1ab/nsp13151I151VAttGtt11B.30.000831
ORF1ab/nsp13151I151VAttGtt11B.400.000364
ORF1ab/nsp13151I151VAttGtt11B.450.003831
ORF1ab/nsp13151I151SaTtaGt11B.6.60.000889
ORF1ab/nsp13151I151VAttGtt11C.36.30.000567
ORF1ab/nsp13151I151VAttGtt11C.370.000116
ORF1ab/nsp13151I151IatTatC11D.20.000075
ORF1ab/nsp13151I151VAttGtt11D.20.000075
ORF1ab/nsp13151I151QATTCAG11P.10.000016
ORF1ab/nsp13151I151SaTTaGC11P.10.000016
ORF1ab/nsp13151I151VAttGtt11P.1.120.000484
ORF1ab/nsp13151I151VAttGtt11P.1.140.000048
ORF1ab/nsp13151I151VAttGtt11Q.10.000126
ORF1ab/nsp13151I151delATT---11Q.10.000126
ORF1ab/nsp13151I151FAttTtt11Q.10.000126