CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 140 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13140A140VA5464VnonsyngCtgTt5959116654-16656

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13140A140VgCtgTt5959All0.000011
ORF1ab/nsp13140A140VgCtgTt1717B.1.177.820.008115
ORF1ab/nsp13140A140VgCtgTt66B.1.20.000053
ORF1ab/nsp13140A140VgCtgTt66B.1.4710.016393
ORF1ab/nsp13140A140VgCtgTt33B.10.000027
ORF1ab/nsp13140A140VgCtgTt22B.1.1.5190.000079
ORF1ab/nsp13140A140VgCtgTt22B.1.1.70.000002
ORF1ab/nsp13140A140VgCtgTt22B.1.2430.000139
ORF1ab/nsp13140A140VgCtgTt22B.1.360.000292
ORF1ab/nsp13140A140VgCtgTt22B.400.000729
ORF1ab/nsp13140A140VgCtgTt22P.1.10.000635
ORF1ab/nsp13140A140VgCtgTt11AY.1130.000142
ORF1ab/nsp13140A140VgCtgTt11AY.1190.000035
ORF1ab/nsp13140A140VgCtgTt11AY.250.000006
ORF1ab/nsp13140A140VgCtgTt11AY.4.20.000022
ORF1ab/nsp13140A140VgCtgTt11B0.000128
ORF1ab/nsp13140A140VgCtgTt11B.1.10.000018
ORF1ab/nsp13140A140VgCtgTt11B.1.1.2040.00304
ORF1ab/nsp13140A140VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp13140A140VgCtgTt11B.1.177.540.000606
ORF1ab/nsp13140A140VgCtgTt11B.1.2210.000071
ORF1ab/nsp13140A140VgCtgTt11B.1.3240.001605
ORF1ab/nsp13140A140VgCtgTt11B.1.3360.002439
ORF1ab/nsp13140A140VgCtgTt11B.1.617.20.000004
ORF1ab/nsp13140A140VgCtgTt11B.1.90.006173
ORF1ab/nsp13140A140VgCtgTt11D.20.000075