CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : CodonNum = 137

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13137T137TT5461TsynacGacT19096177950.93187116645-16647
ORF1ab/nsp13137T137TT5461TsynacGacA1909611700.061269416645-16647
ORF1ab/nsp13137T137TT5461TsynacGacC190961310.0068600816645-16647
ORF1ab/nsp13137T137MT5461MnonsynaCgaTg175175116645-16647
ORF1ab/nsp13137T137delT5461deldelACG---150150116645-16647
ORF1ab/nsp13137T137AT5461AnonsynAcgGcg750.71428616645-16647
ORF1ab/nsp13137T137ST5461SnonsynAcGTcT740.57142916645-16647
ORF1ab/nsp13137T137ST5461SnonsynAcgTcg730.42857116645-16647
ORF1ab/nsp13137T137AT5461AnonsynAcGGcC710.14285716645-16647
ORF1ab/nsp13137T137AT5461AnonsynAcGGcT710.14285716645-16647
ORF1ab/nsp13137T137KT5461KnonsynaCgaAg33116645-16647
ORF1ab/nsp13137T137RT5461RnonsynaCgaGg33116645-16647
ORF1ab/nsp13137T137del2T5461del2delACG--N22116645-16647
ORF1ab/nsp13137T137LT5461LnonsynACGTTA22116645-16647
ORF1ab/nsp13137T137del1T5461del1delacGac-11116645-16647
ORF1ab/nsp13137T137PT5461PnonsynAcgCcg11116645-16647
ORF1ab/nsp13137T137QT5461QnonsynACgCAg11116645-16647

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13137T137TacGacT1779519096All0.003404
ORF1ab/nsp13137T137TacGacA117019096All0.000224
ORF1ab/nsp13137T137TacGacC13119096All0.000025
ORF1ab/nsp13137T137TacGacT1325213252D.20.994447
ORF1ab/nsp13137T137TacGacT468864B.1.1.70.000419
ORF1ab/nsp13137T137TacGacA394864B.1.1.70.000353
ORF1ab/nsp13137T137TacGacC2864B.1.1.70.000002
ORF1ab/nsp13137T137TacGacT466466AY.1200.017325
ORF1ab/nsp13137T137TacGacT339367B.10.003105
ORF1ab/nsp13137T137TacGacA25367B.10.000229
ORF1ab/nsp13137T137TacGacC3367B.10.000027
ORF1ab/nsp13137T137TacGacT278361AY.40.000433
ORF1ab/nsp13137T137TacGacA79361AY.40.000123
ORF1ab/nsp13137T137TacGacC4361AY.40.000006
ORF1ab/nsp13137T137TacGacT268270AY.1030.001664
ORF1ab/nsp13137T137TacGacA2270AY.1030.000012
ORF1ab/nsp13137T137TacGacT254270AY.430.001125
ORF1ab/nsp13137T137TacGacA16270AY.430.000071
ORF1ab/nsp13137T137TacGacT225249B.1.617.20.000847
ORF1ab/nsp13137T137TacGacA19249B.1.617.20.000072
ORF1ab/nsp13137T137TacGacC5249B.1.617.20.000019
ORF1ab/nsp13137T137TacGacT215221B.1.10.0039
ORF1ab/nsp13137T137TacGacA6221B.1.10.000109
ORF1ab/nsp13137T137TacGacT188197B.1.2430.013082
ORF1ab/nsp13137T137TacGacA9197B.1.2430.000626
ORF1ab/nsp13137T137TacGacT181181B.1.1.3480.144108
ORF1ab/nsp13137T137MaCgaTg175175All0.000033
ORF1ab/nsp13137T137TacGacT123165AY.440.000749
ORF1ab/nsp13137T137TacGacA38165AY.440.000231
ORF1ab/nsp13137T137TacGacC4165AY.440.000024
ORF1ab/nsp13137T137delACG---150150All0.000029
ORF1ab/nsp13137T137TacGacA121121B.1.3670.09588
ORF1ab/nsp13137T137TacGacC102102B.1.1390.07478
ORF1ab/nsp13137T137delACG---9191B.1.1.70.000081
ORF1ab/nsp13137T137TacGacA8789AY.4.50.009352
ORF1ab/nsp13137T137TacGacT289AY.4.50.000215
ORF1ab/nsp13137T137TacGacT8487AY.390.002076
ORF1ab/nsp13137T137TacGacA387AY.390.000074
ORF1ab/nsp13137T137TacGacT7082B.1.20.000616
ORF1ab/nsp13137T137TacGacA1282B.1.20.000106
ORF1ab/nsp13137T137TacGacT5375AY.250.000319
ORF1ab/nsp13137T137TacGacA2275AY.250.000132
ORF1ab/nsp13137T137TacGacA4266AY.30.000418
ORF1ab/nsp13137T137TacGacT2466AY.30.000239
ORF1ab/nsp13137T137TacGacT5959B.1.5631
ORF1ab/nsp13137T137TacGacT4957B.1.4290.001153
ORF1ab/nsp13137T137TacGacA857B.1.4290.000188
ORF1ab/nsp13137T137TacGacT5556B.1.1.700.018759
ORF1ab/nsp13137T137TacGacA156B.1.1.700.000341
ORF1ab/nsp13137T137TacGacA3856B.1.1600.001185
ORF1ab/nsp13137T137TacGacT1756B.1.1600.00053
ORF1ab/nsp13137T137TacGacC156B.1.1600.000031
ORF1ab/nsp13137T137TacGacT5050B.1.177.330.082237
ORF1ab/nsp13137T137TacGacT3441B.1.1770.000448
ORF1ab/nsp13137T137TacGacA741B.1.1770.000092
ORF1ab/nsp13137T137MaCgaTg4040B.1.1.70.000036
ORF1ab/nsp13137T137TacGacA4040B.1.5750.012136
ORF1ab/nsp13137T137TacGacT3537B.1.360.005107
ORF1ab/nsp13137T137TacGacA237B.1.360.000292
ORF1ab/nsp13137T137TacGacT3136AY.1020.000822
ORF1ab/nsp13137T137TacGacA536AY.1020.000133
ORF1ab/nsp13137T137TacGacA3435AY.20.012108
ORF1ab/nsp13137T137TacGacT135AY.20.000356
ORF1ab/nsp13137T137TacGacT3334P.10.00052
ORF1ab/nsp13137T137TacGacA134P.10.000016
ORF1ab/nsp13137T137TacGacT3232B.1.1.250.018192
ORF1ab/nsp13137T137TacGacT3030B.1.6320.201342
ORF1ab/nsp13137T137TacGacT2628B.1.3510.000773
ORF1ab/nsp13137T137TacGacA228B.1.3510.000059
ORF1ab/nsp13137T137TacGacT2728B.1.4270.001363
ORF1ab/nsp13137T137TacGacA128B.1.4270.00005
ORF1ab/nsp13137T137TacGacT2526AY.200.000972
ORF1ab/nsp13137T137TacGacA126AY.200.000039
ORF1ab/nsp13137T137TacGacA1325AY.1190.000459
ORF1ab/nsp13137T137TacGacT1225AY.1190.000424
ORF1ab/nsp13137T137TacGacT2525B.1.1.2220.0051
ORF1ab/nsp13137T137TacGacT2224AY.290.000347
ORF1ab/nsp13137T137TacGacA224AY.290.000032
ORF1ab/nsp13137T137TacGacA1824AY.420.000724
ORF1ab/nsp13137T137TacGacT624AY.420.000241
ORF1ab/nsp13137T137TacGacT2024AY.50.000413
ORF1ab/nsp13137T137TacGacA424AY.50.000083
ORF1ab/nsp13137T137TacGacT2324P.1.170.00372
ORF1ab/nsp13137T137TacGacA124P.1.170.000162
ORF1ab/nsp13137T137TacGacT2222B.1.1.3110.00788
ORF1ab/nsp13137T137TacGacA1321AY.46.60.000939
ORF1ab/nsp13137T137TacGacT821AY.46.60.000578
ORF1ab/nsp13137T137TacGacT2021C.370.002321
ORF1ab/nsp13137T137TacGacA121C.370.000116
ORF1ab/nsp13137T137TacGacT1818B.1.1.2410.037267
ORF1ab/nsp13137T137TacGacT1818B.1.5510.023226
ORF1ab/nsp13137T137TacGacT1717B.1.5260.0004
ORF1ab/nsp13137T137TacGacT1617B.1.5960.001394
ORF1ab/nsp13137T137TacGacA117B.1.5960.000087
ORF1ab/nsp13137T137TacGacA1417P.1.150.003253
ORF1ab/nsp13137T137TacGacT317P.1.150.000697
ORF1ab/nsp13137T137delACG---1616B.1.1770.000211
ORF1ab/nsp13137T137TacGacT1415AY.980.001106
ORF1ab/nsp13137T137TacGacA115AY.980.000079
ORF1ab/nsp13137T137TacGacA1215B.1.1.2140.000665
ORF1ab/nsp13137T137TacGacT315B.1.1.2140.000166
ORF1ab/nsp13137T137TacGacT1515B.1.2390.018315
ORF1ab/nsp13137T137TacGacT1515P.1.10.004765
ORF1ab/nsp13137T137TacGacT1414AY.4.40.005728
ORF1ab/nsp13137T137TacGacA814B.1.2580.000532
ORF1ab/nsp13137T137TacGacT614B.1.2580.000399
ORF1ab/nsp13137T137MaCgaTg1414B.1.6370.001023
ORF1ab/nsp13137T137MaCgaTg1313B.1.1.2880.024904
ORF1ab/nsp13137T137TacGacT1313B.1.1.5250.071038
ORF1ab/nsp13137T137TacGacT1313P.1.140.000621
ORF1ab/nsp13137T137TacGacT1012AY.4.20.000217
ORF1ab/nsp13137T137TacGacA112AY.4.20.000022
ORF1ab/nsp13137T137TacGacC112AY.4.20.000022
ORF1ab/nsp13137T137TacGacT912AY.470.00028
ORF1ab/nsp13137T137TacGacA312AY.470.000093
ORF1ab/nsp13137T137MaCgaTg1212B.10.00011
ORF1ab/nsp13137T137TacGacT1212B.1.1.5190.000477
ORF1ab/nsp13137T137MaCgaTg1212B.1.20.000106
ORF1ab/nsp13137T137TacGacT1111AY.110.014726
ORF1ab/nsp13137T137TacGacT1011AY.260.000283
ORF1ab/nsp13137T137TacGacC111AY.260.000028
ORF1ab/nsp13137T137TacGacT1111B.1.1.1530.012048
ORF1ab/nsp13137T137MaCgaTg1111B.1.177.440.005708
ORF1ab/nsp13137T137TacGacT1010B.1.4590.040816
ORF1ab/nsp13137T137TacGacT99AY.1170.000761
ORF1ab/nsp13137T137TacGacT99AY.120.10.002889
ORF1ab/nsp13137T137TacGacT89AY.46.50.001587
ORF1ab/nsp13137T137TacGacA19AY.46.50.000198
ORF1ab/nsp13137T137TacGacT99AY.90.000608
ORF1ab/nsp13137T137TacGacA59B.1.6210.000443
ORF1ab/nsp13137T137TacGacT29B.1.6210.000177
ORF1ab/nsp13137T137TacGacC29B.1.6210.000177
ORF1ab/nsp13137T137TacGacT88AY.610.000838
ORF1ab/nsp13137T137TacGacT78AY.99.20.000645
ORF1ab/nsp13137T137TacGacA18AY.99.20.000092
ORF1ab/nsp13137T137TacGacT88B.1.1990.033058
ORF1ab/nsp13137T137TacGacT88B.1.810.170213
ORF1ab/nsp13137T137AAcgGcg57All0.000001
ORF1ab/nsp13137T137SAcGTcT47All0.000001
ORF1ab/nsp13137T137SAcgTcg37All0.000001
ORF1ab/nsp13137T137AAcGGcC17All0
ORF1ab/nsp13137T137AAcGGcT17All0
ORF1ab/nsp13137T137TacGacT77AY.1000.000322
ORF1ab/nsp13137T137TacGacT77AY.140.000616
ORF1ab/nsp13137T137TacGacT77B.1.110.30.005029
ORF1ab/nsp13137T137TacGacT77B.1.3110.001922
ORF1ab/nsp13137T137TacGacT77B.1.5970.032407
ORF1ab/nsp13137T137TacGacT77P.20.001306
ORF1ab/nsp13137T137delACG---660.333333
ORF1ab/nsp13137T137TacGacA46AY.230.000279
ORF1ab/nsp13137T137TacGacT26AY.230.000139
ORF1ab/nsp13137T137TacGacT66AY.3.10.000512
ORF1ab/nsp13137T137TacGacT66AY.330.000401
ORF1ab/nsp13137T137TacGacT56AY.9.10.000419
ORF1ab/nsp13137T137TacGacA16AY.9.10.000084
ORF1ab/nsp13137T137TacGacA66B.1.1.1570.005479
ORF1ab/nsp13137T137TacGacT66B.1.1.3040.016854
ORF1ab/nsp13137T137TacGacA56B.1.2210.000355
ORF1ab/nsp13137T137TacGacT16B.1.2210.000071
ORF1ab/nsp13137T137TacGacT66B.1.617.10.000774
ORF1ab/nsp13137T137delACG---55AD.20.001095
ORF1ab/nsp13137T137TacGacT55AY.1130.000712
ORF1ab/nsp13137T137TacGacT55AY.1160.001434
ORF1ab/nsp13137T137TacGacT55AY.116.10.001557
ORF1ab/nsp13137T137TacGacT55AY.170.040984
ORF1ab/nsp13137T137TacGacT55AY.840.002187
ORF1ab/nsp13137T137delACG---55B.1.10.000091
ORF1ab/nsp13137T137TacGacT55B.1.1.1610.017668
ORF1ab/nsp13137T137TacGacT55B.1.6280.001762
ORF1ab/nsp13137T137TacGacT55B.1.6370.000365
ORF1ab/nsp13137T137TacGacT44AY.1210.000541
ORF1ab/nsp13137T137TacGacT44AY.450.000487
ORF1ab/nsp13137T137TacGacT44AY.98.10.000194
ORF1ab/nsp13137T137delACG---44AZ.20.003284
ORF1ab/nsp13137T137MaCgaTg44B.1.10.000073
ORF1ab/nsp13137T137TacGacT44B.1.1.2690.005413
ORF1ab/nsp13137T137TacGacT44B.1.1700.017241
ORF1ab/nsp13137T137TacGacT44B.1.3600.050633
ORF1ab/nsp13137T137TacGacT34B.1.5250.000339
ORF1ab/nsp13137T137TacGacA14B.1.5250.000113
ORF1ab/nsp13137T137SAcGTcT44D.20.0003
ORF1ab/nsp13137T137TacGacT33AE.20.176471
ORF1ab/nsp13137T137KaCgaAg33All0.000001
ORF1ab/nsp13137T137RaCgaGg33All0.000001
ORF1ab/nsp13137T137TacGacT33AU.20.007264
ORF1ab/nsp13137T137TacGacA23AY.340.000194
ORF1ab/nsp13137T137TacGacT13AY.340.000097
ORF1ab/nsp13137T137TacGacT33AY.70.000588
ORF1ab/nsp13137T137TacGacT33AY.7.10.000338
ORF1ab/nsp13137T137TacGacT33AY.750.000168
ORF1ab/nsp13137T137TacGacT33AY.850.001282
ORF1ab/nsp13137T137TacGacA23AY.9.20.000073
ORF1ab/nsp13137T137TacGacT13AY.9.20.000037
ORF1ab/nsp13137T137TacGacA33AY.900.002053
ORF1ab/nsp13137T137TacGacT33AY.920.000862
ORF1ab/nsp13137T137MaCgaTg33B0.000383
ORF1ab/nsp13137T137TacGacT23B0.000256
ORF1ab/nsp13137T137TacGacA13B0.000128
ORF1ab/nsp13137T137delACG---33B.10.000027
ORF1ab/nsp13137T137AAcgGcg23B.1.10.000036
ORF1ab/nsp13137T137AAcGGcC13B.1.10.000018
ORF1ab/nsp13137T137TacGacT33B.1.1.1710.011029
ORF1ab/nsp13137T137TacGacT33B.1.1.2070.003546
ORF1ab/nsp13137T137TacGacT13B.1.1.280.000311
ORF1ab/nsp13137T137TacGacC13B.1.1.280.000311
ORF1ab/nsp13137T137TacGacA13B.1.1.280.000311
ORF1ab/nsp13137T137TacGacT33B.1.1.2840.000322
ORF1ab/nsp13137T137TacGacA23B.1.1.390.001019
ORF1ab/nsp13137T137TacGacT13B.1.1.390.00051
ORF1ab/nsp13137T137TacGacT33B.1.1.630.001157
ORF1ab/nsp13137T137TacGacT33B.1.1310.026316
ORF1ab/nsp13137T137MaCgaTg33B.1.1770.00004
ORF1ab/nsp13137T137MaCgaTg33B.1.177.540.001819
ORF1ab/nsp13137T137MaCgaTg33B.1.177.860.00055
ORF1ab/nsp13137T137TacGacT33B.1.2400.000647
ORF1ab/nsp13137T137TacGacA23B.1.2650.002541
ORF1ab/nsp13137T137TacGacT13B.1.2650.001271
ORF1ab/nsp13137T137TacGacT33B.1.3200.003736
ORF1ab/nsp13137T137TacGacT33B.1.36.10.003421
ORF1ab/nsp13137T137TacGacT33B.1.36.80.003
ORF1ab/nsp13137T137TacGacT23B.1.438.10.000215
ORF1ab/nsp13137T137TacGacA13B.1.438.10.000107
ORF1ab/nsp13137T137MaCgaTg33B.1.617.20.000011
ORF1ab/nsp13137T137TacGacT33B.30.002492
ORF1ab/nsp13137T137TacGacA23P.1.100.000539
ORF1ab/nsp13137T137TacGacT13P.1.100.000269
ORF1ab/nsp13137T137LACGTTA220.111111
ORF1ab/nsp13137T137MaCgaTg22A0.000774
ORF1ab/nsp13137T137TacGacT22A.2.50.000998
ORF1ab/nsp13137T137LACGTTA22All0
ORF1ab/nsp13137T137del2ACG--N22All0
ORF1ab/nsp13137T137TacGacT22AY.130.000322
ORF1ab/nsp13137T137TacGacA22AY.480.00093
ORF1ab/nsp13137T137TacGacT22AY.7.20.001119
ORF1ab/nsp13137T137TacGacA22AY.710.00095
ORF1ab/nsp13137T137TacGacT22AY.75.10.000361
ORF1ab/nsp13137T137TacGacA12AY.99.10.001553
ORF1ab/nsp13137T137TacGacT12AY.99.10.001553
ORF1ab/nsp13137T137TacGacT22B.1.1.1890.003026
ORF1ab/nsp13137T137TacGacT22B.1.1.2160.001781
ORF1ab/nsp13137T137delACG---22B.1.1.3060.000877
ORF1ab/nsp13137T137TacGacT12B.1.1.3060.000438
ORF1ab/nsp13137T137TacGacA12B.1.1.3060.000438
ORF1ab/nsp13137T137delACG---22B.1.1.3150.016949
ORF1ab/nsp13137T137TacGacT22B.1.1.3170.000823
ORF1ab/nsp13137T137TacGacT22B.1.1.3180.000604
ORF1ab/nsp13137T137TacGacT22B.1.1.4480.004065
ORF1ab/nsp13137T137TacGacT22B.1.1.5210.010695
ORF1ab/nsp13137T137del2ACG--N22B.1.1.70.000002
ORF1ab/nsp13137T137MaCgaTg22B.1.1600.000062
ORF1ab/nsp13137T137TacGacT22B.1.160.270.030303
ORF1ab/nsp13137T137TacGacT22B.1.2340.000264
ORF1ab/nsp13137T137TacGacT22B.1.2370.00995
ORF1ab/nsp13137T137MaCgaTg22B.1.2430.000139
ORF1ab/nsp13137T137MaCgaTg22B.1.2580.000133
ORF1ab/nsp13137T137TacGacT22B.1.4040.002604
ORF1ab/nsp13137T137TacGacT22B.1.4560.006536
ORF1ab/nsp13137T137TacGacT22B.1.4970.00063
ORF1ab/nsp13137T137MaCgaTg22B.1.5260.000047
ORF1ab/nsp13137T137TacGacT22B.1.5400.019417
ORF1ab/nsp13137T137TacGacA22B.1.5490.014388
ORF1ab/nsp13137T137TacGacC22B.1.5650.001621
ORF1ab/nsp13137T137TacGacT22B.1.5770.001375
ORF1ab/nsp13137T137TacGacT22B.1.5880.00182
ORF1ab/nsp13137T137MaCgaTg22B.1.5960.000174
ORF1ab/nsp13137T137TacGacT22B.1.6180.008065
ORF1ab/nsp13137T137TacGacT22B.1.910.004149
ORF1ab/nsp13137T137TacGacT22B.1.930.001867
ORF1ab/nsp13137T137MaCgaTg22B.400.000729
ORF1ab/nsp13137T137TacGacT22C.360.001821
ORF1ab/nsp13137T137MaCgaTg22N.60.014184
ORF1ab/nsp13137T137MaCgaTg22P.10.000032
ORF1ab/nsp13137T137TacGacT22P.1.70.000639
ORF1ab/nsp13137T137delACG---22Q.10.000253
ORF1ab/nsp13137T137TacGacT22Q.30.00029
ORF1ab/nsp13137T137TacGacC110.055556
ORF1ab/nsp13137T137TacGacT11A0.000387
ORF1ab/nsp13137T137TacGacA11A.2.40.003367
ORF1ab/nsp13137T137TacGacT11A.270.001656
ORF1ab/nsp13137T137QACgCAg11All0
ORF1ab/nsp13137T137del1acGac-11All0
ORF1ab/nsp13137T137PAcgCcg11All0
ORF1ab/nsp13137T137TacGacT11AY.1010.00049
ORF1ab/nsp13137T137MaCgaTg11AY.1020.000027
ORF1ab/nsp13137T137TacGacA11AY.1100.000113
ORF1ab/nsp13137T137TacGacT11AY.1110.000183
ORF1ab/nsp13137T137TacGacA11AY.1140.000231
ORF1ab/nsp13137T137TacGacT11AY.1180.000063
ORF1ab/nsp13137T137MaCgaTg11AY.1190.000035
ORF1ab/nsp13137T137TacGacT11AY.120.000316
ORF1ab/nsp13137T137RaCgaGg11AY.1200.000037
ORF1ab/nsp13137T137TacGacT11AY.120.20.001285
ORF1ab/nsp13137T137TacGacT11AY.16.10.00047
ORF1ab/nsp13137T137AAcgGcg11AY.230.00007
ORF1ab/nsp13137T137MaCgaTg11AY.23.10.000417
ORF1ab/nsp13137T137TacGacT11AY.240.000431
ORF1ab/nsp13137T137delACG---11AY.240.000431
ORF1ab/nsp13137T137TacGacT11AY.270.000065
ORF1ab/nsp13137T137TacGacT11AY.280.00189
ORF1ab/nsp13137T137TacGacT11AY.320.000532
ORF1ab/nsp13137T137MaCgaTg11AY.330.000067
ORF1ab/nsp13137T137TacGacT11AY.34.10.00051
ORF1ab/nsp13137T137TacGacT11AY.350.000233
ORF1ab/nsp13137T137MaCgaTg11AY.390.000025
ORF1ab/nsp13137T137delACG---11AY.40.000002
ORF1ab/nsp13137T137MaCgaTg11AY.40.000002
ORF1ab/nsp13137T137AAcgGcg11AY.40.000002
ORF1ab/nsp13137T137TacGacA11AY.4.2.10.000149
ORF1ab/nsp13137T137TacGacT11AY.400.000964
ORF1ab/nsp13137T137MaCgaTg11AY.430.000004
ORF1ab/nsp13137T137delACG---11AY.430.000004
ORF1ab/nsp13137T137RaCgaGg11AY.440.000006
ORF1ab/nsp13137T137MaCgaTg11AY.440.000006
ORF1ab/nsp13137T137TacGacT11AY.46.20.000635
ORF1ab/nsp13137T137MaCgaTg11AY.480.000465
ORF1ab/nsp13137T137TacGacT11AY.5.40.000277
ORF1ab/nsp13137T137TacGacT11AY.520.000814
ORF1ab/nsp13137T137TacGacT11AY.530.000288
ORF1ab/nsp13137T137TacGacT11AY.540.000095
ORF1ab/nsp13137T137TacGacT11AY.570.000656
ORF1ab/nsp13137T137TacGacT11AY.590.00053
ORF1ab/nsp13137T137MaCgaTg11AY.60.000041
ORF1ab/nsp13137T137TacGacT11AY.60.000041
ORF1ab/nsp13137T137TacGacT11AY.600.000938
ORF1ab/nsp13137T137TacGacT11AY.620.000436
ORF1ab/nsp13137T137TacGacA11AY.650.000533
ORF1ab/nsp13137T137TacGacT11AY.730.000665
ORF1ab/nsp13137T137TacGacT11AY.80.000606
ORF1ab/nsp13137T137RaCgaGg11B.10.000009
ORF1ab/nsp13137T137KaCgaAg11B.10.000009
ORF1ab/nsp13137T137del1acGac-11B.10.000009
ORF1ab/nsp13137T137TacGacT11B.1.1.10.000327
ORF1ab/nsp13137T137AAcgGcg11B.1.1.100.001115
ORF1ab/nsp13137T137TacGacT11B.1.1.1280.007092
ORF1ab/nsp13137T137TacGacT11B.1.1.140.017241
ORF1ab/nsp13137T137TacGacT11B.1.1.1690.018182
ORF1ab/nsp13137T137delACG---11B.1.1.2310.003096
ORF1ab/nsp13137T137MaCgaTg11B.1.1.2670.010101
ORF1ab/nsp13137T137TacGacC11B.1.1.270.00565
ORF1ab/nsp13137T137TacGacT11B.1.1.2770.000759
ORF1ab/nsp13137T137TacGacT11B.1.1.2980.000862
ORF1ab/nsp13137T137delACG---11B.1.1.3050.003861
ORF1ab/nsp13137T137TacGacT11B.1.1.330.000421
ORF1ab/nsp13137T137TacGacT11B.1.1.3760.005952
ORF1ab/nsp13137T137TacGacT11B.1.1.3970.002252
ORF1ab/nsp13137T137TacGacT11B.1.1.4040.015873
ORF1ab/nsp13137T137TacGacT11B.1.1.4130.006897
ORF1ab/nsp13137T137TacGacT11B.1.1.4340.000349
ORF1ab/nsp13137T137delACG---11B.1.1.440.00241
ORF1ab/nsp13137T137delACG---11B.1.1.510.001718
ORF1ab/nsp13137T137delACG---11B.1.1.5190.00004
ORF1ab/nsp13137T137QACgCAg11B.1.1.70.000001
ORF1ab/nsp13137T137MaCgaTg11B.1.1.700.000341
ORF1ab/nsp13137T137KaCgaAg11B.1.1100.004525
ORF1ab/nsp13137T137TacGacT11B.1.1110.001175
ORF1ab/nsp13137T137MaCgaTg11B.1.1470.000756
ORF1ab/nsp13137T137TacGacT11B.1.1570.002985
ORF1ab/nsp13137T137TacGacT11B.1.160.160.000929
ORF1ab/nsp13137T137delACG---11B.1.160.230.004831
ORF1ab/nsp13137T137SAcgTcg11B.1.1770.000013
ORF1ab/nsp13137T137TacGacT11B.1.177.100.000878
ORF1ab/nsp13137T137TacGacA11B.1.177.160.000664
ORF1ab/nsp13137T137TacGacT11B.1.177.210.000076
ORF1ab/nsp13137T137MaCgaTg11B.1.177.350.000691
ORF1ab/nsp13137T137TacGacT11B.1.177.460.000918
ORF1ab/nsp13137T137MaCgaTg11B.1.177.550.002331
ORF1ab/nsp13137T137TacGacT11B.1.177.560.000668
ORF1ab/nsp13137T137MaCgaTg11B.1.177.560.000668
ORF1ab/nsp13137T137TacGacT11B.1.177.580.001332
ORF1ab/nsp13137T137MaCgaTg11B.1.177.580.001332
ORF1ab/nsp13137T137TacGacA11B.1.177.60.000977
ORF1ab/nsp13137T137TacGacT11B.1.177.600.000218
ORF1ab/nsp13137T137delACG---11B.1.177.730.000566
ORF1ab/nsp13137T137delACG---11B.1.177.830.001481
ORF1ab/nsp13137T137SAcgTcg11B.1.177.850.005435
ORF1ab/nsp13137T137TacGacT11B.1.1950.005025
ORF1ab/nsp13137T137SAcgTcg11B.1.20.000009
ORF1ab/nsp13137T137PAcgCcg11B.1.20.000009
ORF1ab/nsp13137T137TacGacT11B.1.2060.000816
ORF1ab/nsp13137T137TacGacT11B.1.214.20.0006
ORF1ab/nsp13137T137MaCgaTg11B.1.2210.000071
ORF1ab/nsp13137T137TacGacT11B.1.2360.002053
ORF1ab/nsp13137T137delACG---11B.1.2420.018868
ORF1ab/nsp13137T137TacGacT11B.1.258.120.007874
ORF1ab/nsp13137T137MaCgaTg11B.1.258.170.000104
ORF1ab/nsp13137T137TacGacT11B.1.258.170.000104
ORF1ab/nsp13137T137TacGacA11B.1.258.220.002667
ORF1ab/nsp13137T137TacGacT11B.1.2790.000514
ORF1ab/nsp13137T137MaCgaTg11B.1.3110.000275
ORF1ab/nsp13137T137TacGacA11B.1.351.20.000303
ORF1ab/nsp13137T137TacGacT11B.1.351.30.000876
ORF1ab/nsp13137T137delACG---11B.1.360.000146
ORF1ab/nsp13137T137TacGacT11B.1.36.180.00042
ORF1ab/nsp13137T137TacGacT11B.1.3620.001541
ORF1ab/nsp13137T137TacGacT11B.1.3660.004878
ORF1ab/nsp13137T137MaCgaTg11B.1.3670.000792
ORF1ab/nsp13137T137TacGacT11B.1.3710.001122
ORF1ab/nsp13137T137TacGacT11B.1.3750.00082
ORF1ab/nsp13137T137MaCgaTg11B.1.3910.001127
ORF1ab/nsp13137T137TacGacT11B.1.3950.007042
ORF1ab/nsp13137T137TacGacT11B.1.3960.000706
ORF1ab/nsp13137T137TacGacT11B.1.3970.004854
ORF1ab/nsp13137T137TacGacT11B.1.3990.001934
ORF1ab/nsp13137T137TacGacA11B.1.4010.008197
ORF1ab/nsp13137T137TacGacT11B.1.4020.009804
ORF1ab/nsp13137T137TacGacT11B.1.4220.000812
ORF1ab/nsp13137T137MaCgaTg11B.1.4270.00005
ORF1ab/nsp13137T137MaCgaTg11B.1.4290.000024
ORF1ab/nsp13137T137TacGacT11B.1.466.20.000391
ORF1ab/nsp13137T137AAcGGcT11B.1.4970.000315
ORF1ab/nsp13137T137TacGacT11B.1.4990.00105
ORF1ab/nsp13137T137MaCgaTg11B.1.499.10.111111
ORF1ab/nsp13137T137MaCgaTg11B.1.5070.011236
ORF1ab/nsp13137T137TacGacT11B.1.5200.021739
ORF1ab/nsp13137T137TacGacA11B.1.5640.000426
ORF1ab/nsp13137T137TacGacT11B.1.5680.001111
ORF1ab/nsp13137T137TacGacT11B.1.5730.006098
ORF1ab/nsp13137T137MaCgaTg11B.1.5740.002151
ORF1ab/nsp13137T137TacGacT11B.1.5820.000491
ORF1ab/nsp13137T137TacGacT11B.1.5950.000261
ORF1ab/nsp13137T137MaCgaTg11B.1.6090.000479
ORF1ab/nsp13137T137TacGacT11B.1.6100.003546
ORF1ab/nsp13137T137MaCgaTg11B.1.6120.002653
ORF1ab/nsp13137T137delACG---11B.1.617.10.000129
ORF1ab/nsp13137T137KaCgaAg11B.1.617.20.000004
ORF1ab/nsp13137T137MaCgaTg11B.1.6210.000089
ORF1ab/nsp13137T137TacGacT11B.1.6360.006711
ORF1ab/nsp13137T137MaCgaTg11B.4.50.011905
ORF1ab/nsp13137T137MaCgaTg11B.60.00091
ORF1ab/nsp13137T137TacGacT11C.10.002392
ORF1ab/nsp13137T137TacGacA11C.170.055556
ORF1ab/nsp13137T137TacGacC11C.180.002591
ORF1ab/nsp13137T137MaCgaTg11C.300.001727
ORF1ab/nsp13137T137TacGacT11C.350.000774
ORF1ab/nsp13137T137TacGacA11C.36.20.034483
ORF1ab/nsp13137T137TacGacT11C.36.30.000567
ORF1ab/nsp13137T137TacGacA11C.37.10.002618
ORF1ab/nsp13137T137MaCgaTg11D.30.005917
ORF1ab/nsp13137T137TacGacT11N.30.005814
ORF1ab/nsp13137T137TacGacT11P.1.120.000484
ORF1ab/nsp13137T137TacGacT11P.1.130.000898
ORF1ab/nsp13137T137MaCgaTg11P.1.140.000048
ORF1ab/nsp13137T137TacGacA11P.1.160.000374
ORF1ab/nsp13137T137TacGacT11Q.10.000126
ORF1ab/nsp13137T137MaCgaTg11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.