CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 884 | Y884Y | Y5276Y | syn | taC | taT | 9995 | 9995 | 1 | 16090-16092 |
Details of the mutation Y884Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 9995 | 9995 | All | 0.001912 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1496 | 1496 | B.1.232 | 0.803869 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1369 | 1369 | AY.4 | 0.002131 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 931 | 931 | B.1.564 | 0.396508 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 877 | 877 | AY.120.1 | 0.281541 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 868 | 868 | B.1.1.7 | 0.000777 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 790 | 790 | AY.103 | 0.004905 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 506 | 506 | AY.9.2.1 | 1 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 264 | 264 | B.1.617.2 | 0.000994 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 242 | 242 | B.1.258 | 0.016104 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 224 | 224 | B.1.1 | 0.004064 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 221 | 221 | B.1.2 | 0.001946 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 186 | 186 | AY.43 | 0.000824 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 135 | 135 | AY.44 | 0.000822 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 134 | 134 | P.1 | 0.002111 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 124 | 124 | AY.5 | 0.002561 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 120 | 120 | B.1.177 | 0.00158 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 117 | 117 | AY.119 | 0.004131 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 90 | 90 | B.1 | 0.000824 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 82 | 82 | AY.36 | 0.012154 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 59 | 59 | B.1.36 | 0.008608 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 45 | 45 | AY.25 | 0.000271 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 44 | 44 | AY.102 | 0.001167 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 42 | 42 | AY.26 | 0.001189 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 42 | 42 | B.1.160 | 0.00131 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 41 | 41 | B.1.1.214 | 0.002274 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 40 | 40 | AY.98 | 0.00316 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 36 | 36 | AY.118 | 0.002255 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 36 | 36 | AY.98.1 | 0.001744 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 35 | 35 | B.1.1.519 | 0.00139 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 30 | 30 | AY.29 | 0.000473 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 30 | 30 | B.1.429 | 0.000706 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 29 | 29 | AY.20 | 0.001127 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 25 | 25 | AY.39 | 0.000618 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 23 | 23 | AY.3 | 0.000229 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 23 | 23 | AY.74 | 0.00266 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 22 | 22 | AY.50 | 0.017586 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 17 | 17 | B.1.1.189 | 0.025719 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 16 | 16 | B.1.427 | 0.000808 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 15 | 15 | B.1.369 | 0.004278 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 14 | 14 | AY.9 | 0.000946 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 13 | 13 | AY.42 | 0.000523 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 13 | 13 | B.1.526 | 0.000306 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 12 | 12 | B.1.177.81 | 0.002272 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 12 | 12 | B.1.596 | 0.001046 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 11 | 11 | AY.9.1 | 0.000921 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 11 | 11 | B.1.1.517 | 0.07483 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 10 | 10 | AY.9.2 | 0.000367 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 10 | 10 | B.1.525 | 0.001132 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 9 | 9 | AY.114 | 0.00208 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | AY.113 | 0.000997 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | B.1.36.10 | 0.033493 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | B.1.509 | 0.006061 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 7 | 7 | P.1.12 | 0.003388 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | AY.120 | 0.000223 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | AY.4.5 | 0.000645 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | B.1.139 | 0.004399 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | B.1.311 | 0.001647 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | B.1.527 | 0.022222 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 6 | 6 | R.1 | 0.00054 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.27 | 0.000324 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.5.4 | 0.001384 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.59 | 0.002648 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.7.2 | 0.002796 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | AY.75 | 0.00028 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | B.1.1.243 | 0.020408 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | B.1.561 | 0.001985 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.16 | 0.001519 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.34 | 0.000388 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.4.2.1 | 0.000596 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | AY.63 | 0.001547 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.1.63 | 0.001543 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.177.57 | 0.001124 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.177.73 | 0.002265 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.411 | 0.014815 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.591 | 0.042553 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | B.1.605 | 0.02381 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.277 | 0.002276 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.317 | 0.001235 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.110.3 | 0.002155 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.409 | 0.002344 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.422 | 0.002437 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.468 | 0.017143 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.609 | 0.001438 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.619.1 | 0.001924 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | B.6 | 0.00273 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.5.1 | 0.007519 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.1.231 | 0.006192 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.1.398 | 0.006452 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.177.62 | 0.002384 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | B.4 | 0.004415 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | C.1.2 | 0.008511 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.160 | 0.02381 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.217 | 0.003636 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.270 | 0.010309 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.362 | 0.005618 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.440 | 0.011765 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.169 | 0.014925 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.219 | 0.009434 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.309 | 0.047619 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.36.20 | 0.016949 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.429.1 | 0.012048 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.570 | 0.002941 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.1.84 | 0.020833 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp12 | 884 | Y884Y | taC | taT | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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