CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = Y884Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12884Y884YY5276YsyntaCtaT99959995116090-16092

Details of the mutation Y884Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12884Y884YtaCtaT99959995All0.001912
ORF1ab/nsp12884Y884YtaCtaT14961496B.1.2320.803869
ORF1ab/nsp12884Y884YtaCtaT13691369AY.40.002131
ORF1ab/nsp12884Y884YtaCtaT931931B.1.5640.396508
ORF1ab/nsp12884Y884YtaCtaT877877AY.120.10.281541
ORF1ab/nsp12884Y884YtaCtaT868868B.1.1.70.000777
ORF1ab/nsp12884Y884YtaCtaT790790AY.1030.004905
ORF1ab/nsp12884Y884YtaCtaT506506AY.9.2.11
ORF1ab/nsp12884Y884YtaCtaT264264B.1.617.20.000994
ORF1ab/nsp12884Y884YtaCtaT242242B.1.2580.016104
ORF1ab/nsp12884Y884YtaCtaT224224B.1.10.004064
ORF1ab/nsp12884Y884YtaCtaT221221B.1.20.001946
ORF1ab/nsp12884Y884YtaCtaT186186AY.430.000824
ORF1ab/nsp12884Y884YtaCtaT135135AY.440.000822
ORF1ab/nsp12884Y884YtaCtaT134134P.10.002111
ORF1ab/nsp12884Y884YtaCtaT124124AY.50.002561
ORF1ab/nsp12884Y884YtaCtaT120120B.1.1770.00158
ORF1ab/nsp12884Y884YtaCtaT117117AY.1190.004131
ORF1ab/nsp12884Y884YtaCtaT9090B.10.000824
ORF1ab/nsp12884Y884YtaCtaT8282AY.360.012154
ORF1ab/nsp12884Y884YtaCtaT5959B.1.360.008608
ORF1ab/nsp12884Y884YtaCtaT4545AY.250.000271
ORF1ab/nsp12884Y884YtaCtaT4444AY.1020.001167
ORF1ab/nsp12884Y884YtaCtaT4242AY.260.001189
ORF1ab/nsp12884Y884YtaCtaT4242B.1.1600.00131
ORF1ab/nsp12884Y884YtaCtaT4141B.1.1.2140.002274
ORF1ab/nsp12884Y884YtaCtaT4040AY.980.00316
ORF1ab/nsp12884Y884YtaCtaT3636AY.1180.002255
ORF1ab/nsp12884Y884YtaCtaT3636AY.98.10.001744
ORF1ab/nsp12884Y884YtaCtaT3535B.1.1.5190.00139
ORF1ab/nsp12884Y884YtaCtaT3030AY.290.000473
ORF1ab/nsp12884Y884YtaCtaT3030B.1.4290.000706
ORF1ab/nsp12884Y884YtaCtaT2929AY.200.001127
ORF1ab/nsp12884Y884YtaCtaT2525AY.390.000618
ORF1ab/nsp12884Y884YtaCtaT2323AY.30.000229
ORF1ab/nsp12884Y884YtaCtaT2323AY.740.00266
ORF1ab/nsp12884Y884YtaCtaT2222AY.500.017586
ORF1ab/nsp12884Y884YtaCtaT1717B.1.1.1890.025719
ORF1ab/nsp12884Y884YtaCtaT1616B.1.4270.000808
ORF1ab/nsp12884Y884YtaCtaT1515B.1.3690.004278
ORF1ab/nsp12884Y884YtaCtaT1414AY.90.000946
ORF1ab/nsp12884Y884YtaCtaT1313AY.420.000523
ORF1ab/nsp12884Y884YtaCtaT1313B.1.5260.000306
ORF1ab/nsp12884Y884YtaCtaT1212B.1.177.810.002272
ORF1ab/nsp12884Y884YtaCtaT1212B.1.5960.001046
ORF1ab/nsp12884Y884YtaCtaT1111AY.9.10.000921
ORF1ab/nsp12884Y884YtaCtaT1111B.1.1.5170.07483
ORF1ab/nsp12884Y884YtaCtaT1010AY.9.20.000367
ORF1ab/nsp12884Y884YtaCtaT1010B.1.5250.001132
ORF1ab/nsp12884Y884YtaCtaT99AY.1140.00208
ORF1ab/nsp12884Y884YtaCtaT88P.20.001493
ORF1ab/nsp12884Y884YtaCtaT77AY.1130.000997
ORF1ab/nsp12884Y884YtaCtaT77AY.4.20.000152
ORF1ab/nsp12884Y884YtaCtaT77B.1.3510.000208
ORF1ab/nsp12884Y884YtaCtaT77B.1.36.100.033493
ORF1ab/nsp12884Y884YtaCtaT77B.1.5090.006061
ORF1ab/nsp12884Y884YtaCtaT77P.1.120.003388
ORF1ab/nsp12884Y884YtaCtaT66AY.1200.000223
ORF1ab/nsp12884Y884YtaCtaT66AY.4.50.000645
ORF1ab/nsp12884Y884YtaCtaT66B.1.1390.004399
ORF1ab/nsp12884Y884YtaCtaT66B.1.2430.000418
ORF1ab/nsp12884Y884YtaCtaT66B.1.3110.001647
ORF1ab/nsp12884Y884YtaCtaT66B.1.5270.022222
ORF1ab/nsp12884Y884YtaCtaT66R.10.00054
ORF1ab/nsp12884Y884YtaCtaT55AY.270.000324
ORF1ab/nsp12884Y884YtaCtaT55AY.330.000334
ORF1ab/nsp12884Y884YtaCtaT55AY.460.00052
ORF1ab/nsp12884Y884YtaCtaT55AY.5.40.001384
ORF1ab/nsp12884Y884YtaCtaT55AY.590.002648
ORF1ab/nsp12884Y884YtaCtaT55AY.7.20.002796
ORF1ab/nsp12884Y884YtaCtaT55AY.750.00028
ORF1ab/nsp12884Y884YtaCtaT55B.1.1.2430.020408
ORF1ab/nsp12884Y884YtaCtaT55B.1.2340.00066
ORF1ab/nsp12884Y884YtaCtaT55B.1.5610.001985
ORF1ab/nsp12884Y884YtaCtaT55B.1.6210.000443
ORF1ab/nsp12884Y884YtaCtaT44AY.1000.000184
ORF1ab/nsp12884Y884YtaCtaT44AY.1210.000541
ORF1ab/nsp12884Y884YtaCtaT44AY.160.001519
ORF1ab/nsp12884Y884YtaCtaT44AY.230.000279
ORF1ab/nsp12884Y884YtaCtaT44AY.340.000388
ORF1ab/nsp12884Y884YtaCtaT44AY.4.2.10.000596
ORF1ab/nsp12884Y884YtaCtaT44AY.450.000487
ORF1ab/nsp12884Y884YtaCtaT44AY.630.001547
ORF1ab/nsp12884Y884YtaCtaT44B.1.1.280.001245
ORF1ab/nsp12884Y884YtaCtaT44B.1.1.370.000771
ORF1ab/nsp12884Y884YtaCtaT44B.1.1.630.001543
ORF1ab/nsp12884Y884YtaCtaT44B.1.177.570.001124
ORF1ab/nsp12884Y884YtaCtaT44B.1.177.730.002265
ORF1ab/nsp12884Y884YtaCtaT44B.1.4110.014815
ORF1ab/nsp12884Y884YtaCtaT44B.1.5910.042553
ORF1ab/nsp12884Y884YtaCtaT44B.1.6050.02381
ORF1ab/nsp12884Y884YtaCtaT44C.370.000464
ORF1ab/nsp12884Y884YtaCtaT33AY.1170.000254
ORF1ab/nsp12884Y884YtaCtaT33AY.130.000483
ORF1ab/nsp12884Y884YtaCtaT33AY.46.60.000217
ORF1ab/nsp12884Y884YtaCtaT33AY.650.001599
ORF1ab/nsp12884Y884YtaCtaT33AY.840.001312
ORF1ab/nsp12884Y884YtaCtaT33AY.920.000862
ORF1ab/nsp12884Y884YtaCtaT33B0.000383
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.10.00098
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.2220.000612
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.2770.002276
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.3170.001235
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.3180.000905
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.330.001263
ORF1ab/nsp12884Y884YtaCtaT33B.1.1.390.001529
ORF1ab/nsp12884Y884YtaCtaT33B.1.110.30.002155
ORF1ab/nsp12884Y884YtaCtaT33B.1.2210.000213
ORF1ab/nsp12884Y884YtaCtaT33B.1.258.170.000312
ORF1ab/nsp12884Y884YtaCtaT33B.1.4090.002344
ORF1ab/nsp12884Y884YtaCtaT33B.1.4220.002437
ORF1ab/nsp12884Y884YtaCtaT33B.1.4680.017143
ORF1ab/nsp12884Y884YtaCtaT33B.1.6090.001438
ORF1ab/nsp12884Y884YtaCtaT33B.1.619.10.001924
ORF1ab/nsp12884Y884YtaCtaT33B.1.6370.000219
ORF1ab/nsp12884Y884YtaCtaT33B.60.00273
ORF1ab/nsp12884Y884YtaCtaT33D.20.000225
ORF1ab/nsp12884Y884YtaCtaT33P.1.140.000143
ORF1ab/nsp12884Y884YtaCtaT33P.1.150.000697
ORF1ab/nsp12884Y884YtaCtaT22AY.1110.000366
ORF1ab/nsp12884Y884YtaCtaT22AY.1160.000574
ORF1ab/nsp12884Y884YtaCtaT22AY.140.000176
ORF1ab/nsp12884Y884YtaCtaT22AY.240.000862
ORF1ab/nsp12884Y884YtaCtaT22AY.320.001065
ORF1ab/nsp12884Y884YtaCtaT22AY.39.10.000079
ORF1ab/nsp12884Y884YtaCtaT22AY.46.40.000329
ORF1ab/nsp12884Y884YtaCtaT22AY.5.10.007519
ORF1ab/nsp12884Y884YtaCtaT22AY.730.001331
ORF1ab/nsp12884Y884YtaCtaT22AY.870.001665
ORF1ab/nsp12884Y884YtaCtaT22AY.910.001461
ORF1ab/nsp12884Y884YtaCtaT22AY.99.20.000184
ORF1ab/nsp12884Y884YtaCtaT22AZ.30.00304
ORF1ab/nsp12884Y884YtaCtaT22B.1.1.1760.000879
ORF1ab/nsp12884Y884YtaCtaT22B.1.1.2310.006192
ORF1ab/nsp12884Y884YtaCtaT22B.1.1.3160.00185
ORF1ab/nsp12884Y884YtaCtaT22B.1.1.3980.006452
ORF1ab/nsp12884Y884YtaCtaT22B.1.160.160.001859
ORF1ab/nsp12884Y884YtaCtaT22B.1.177.120.000303
ORF1ab/nsp12884Y884YtaCtaT22B.1.177.210.000153
ORF1ab/nsp12884Y884YtaCtaT22B.1.177.540.001213
ORF1ab/nsp12884Y884YtaCtaT22B.1.177.600.000437
ORF1ab/nsp12884Y884YtaCtaT22B.1.177.620.002384
ORF1ab/nsp12884Y884YtaCtaT22B.1.2410.001623
ORF1ab/nsp12884Y884YtaCtaT22B.1.36.290.001035
ORF1ab/nsp12884Y884YtaCtaT22B.1.438.10.000215
ORF1ab/nsp12884Y884YtaCtaT22B.1.466.20.000782
ORF1ab/nsp12884Y884YtaCtaT22B.1.5750.000607
ORF1ab/nsp12884Y884YtaCtaT22B.1.5770.001375
ORF1ab/nsp12884Y884YtaCtaT22B.40.004415
ORF1ab/nsp12884Y884YtaCtaT22C.1.20.008511
ORF1ab/nsp12884Y884YtaCtaT22C.350.001548
ORF1ab/nsp12884Y884YtaCtaT22Q.10.000253
ORF1ab/nsp12884Y884YtaCtaT22Q.80.00033
ORF1ab/nsp12884Y884YtaCtaT11A.20.000662
ORF1ab/nsp12884Y884YtaCtaT11A.50.001923
ORF1ab/nsp12884Y884YtaCtaT11AW.10.003049
ORF1ab/nsp12884Y884YtaCtaT11AY.10.000396
ORF1ab/nsp12884Y884YtaCtaT11AY.1010.00049
ORF1ab/nsp12884Y884YtaCtaT11AY.110.001339
ORF1ab/nsp12884Y884YtaCtaT11AY.1100.000113
ORF1ab/nsp12884Y884YtaCtaT11AY.120.20.001285
ORF1ab/nsp12884Y884YtaCtaT11AY.16.10.00047
ORF1ab/nsp12884Y884YtaCtaT11AY.280.00189
ORF1ab/nsp12884Y884YtaCtaT11AY.29.10.000221
ORF1ab/nsp12884Y884YtaCtaT11AY.3.10.000085
ORF1ab/nsp12884Y884YtaCtaT11AY.350.000233
ORF1ab/nsp12884Y884YtaCtaT11AY.370.000316
ORF1ab/nsp12884Y884YtaCtaT11AY.410.000294
ORF1ab/nsp12884Y884YtaCtaT11AY.46.20.000635
ORF1ab/nsp12884Y884YtaCtaT11AY.46.50.000198
ORF1ab/nsp12884Y884YtaCtaT11AY.470.000031
ORF1ab/nsp12884Y884YtaCtaT11AY.5.30.000337
ORF1ab/nsp12884Y884YtaCtaT11AY.510.000909
ORF1ab/nsp12884Y884YtaCtaT11AY.540.000095
ORF1ab/nsp12884Y884YtaCtaT11AY.550.000917
ORF1ab/nsp12884Y884YtaCtaT11AY.60.000041
ORF1ab/nsp12884Y884YtaCtaT11AY.610.000105
ORF1ab/nsp12884Y884YtaCtaT11AY.75.10.00018
ORF1ab/nsp12884Y884YtaCtaT11AY.820.001357
ORF1ab/nsp12884Y884YtaCtaT11AY.880.000884
ORF1ab/nsp12884Y884YtaCtaT11AY.930.000273
ORF1ab/nsp12884Y884YtaCtaT11AY.99.10.001553
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.1210.002427
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.1600.02381
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.1920.002309
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2160.00089
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2170.003636
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.250.000569
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2700.010309
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2790.001121
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2840.000107
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.2980.000862
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3060.000438
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3110.000358
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3330.001076
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.340.013158
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3620.005618
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3720.000689
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.3770.001381
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.4400.011765
ORF1ab/nsp12884Y884YtaCtaT11B.1.1.4860.001577
ORF1ab/nsp12884Y884YtaCtaT11B.1.1470.000756
ORF1ab/nsp12884Y884YtaCtaT11B.1.1570.002985
ORF1ab/nsp12884Y884YtaCtaT11B.1.160.300.002976
ORF1ab/nsp12884Y884YtaCtaT11B.1.1690.014925
ORF1ab/nsp12884Y884YtaCtaT11B.1.177.350.000691
ORF1ab/nsp12884Y884YtaCtaT11B.1.177.410.0025
ORF1ab/nsp12884Y884YtaCtaT11B.1.177.420.000894
ORF1ab/nsp12884Y884YtaCtaT11B.1.177.520.001757
ORF1ab/nsp12884Y884YtaCtaT11B.1.177.860.000183
ORF1ab/nsp12884Y884YtaCtaT11B.1.2140.003663
ORF1ab/nsp12884Y884YtaCtaT11B.1.214.20.0006
ORF1ab/nsp12884Y884YtaCtaT11B.1.2190.009434
ORF1ab/nsp12884Y884YtaCtaT11B.1.2400.000216
ORF1ab/nsp12884Y884YtaCtaT11B.1.2790.000514
ORF1ab/nsp12884Y884YtaCtaT11B.1.3090.047619
ORF1ab/nsp12884Y884YtaCtaT11B.1.3200.001245
ORF1ab/nsp12884Y884YtaCtaT11B.1.351.50.0006
ORF1ab/nsp12884Y884YtaCtaT11B.1.36.160.001425
ORF1ab/nsp12884Y884YtaCtaT11B.1.36.200.016949
ORF1ab/nsp12884Y884YtaCtaT11B.1.36.220.001208
ORF1ab/nsp12884Y884YtaCtaT11B.1.36.80.001
ORF1ab/nsp12884Y884YtaCtaT11B.1.3780.006849
ORF1ab/nsp12884Y884YtaCtaT11B.1.4000.000429
ORF1ab/nsp12884Y884YtaCtaT11B.1.4040.001302
ORF1ab/nsp12884Y884YtaCtaT11B.1.416.10.001563
ORF1ab/nsp12884Y884YtaCtaT11B.1.429.10.012048
ORF1ab/nsp12884Y884YtaCtaT11B.1.4990.00105
ORF1ab/nsp12884Y884YtaCtaT11B.1.5240.001406
ORF1ab/nsp12884Y884YtaCtaT11B.1.5700.002941
ORF1ab/nsp12884Y884YtaCtaT11B.1.575.10.002439
ORF1ab/nsp12884Y884YtaCtaT11B.1.617.10.000129
ORF1ab/nsp12884Y884YtaCtaT11B.1.6230.000536
ORF1ab/nsp12884Y884YtaCtaT11B.1.6250.002353
ORF1ab/nsp12884Y884YtaCtaT11B.1.840.020833
ORF1ab/nsp12884Y884YtaCtaT11B.30.000831
ORF1ab/nsp12884Y884YtaCtaT11B.400.000364
ORF1ab/nsp12884Y884YtaCtaT11B.610.005747
ORF1ab/nsp12884Y884YtaCtaT11C.230.005814
ORF1ab/nsp12884Y884YtaCtaT11L.30.003546
ORF1ab/nsp12884Y884YtaCtaT11P.1.100.000269
ORF1ab/nsp12884Y884YtaCtaT11P.1.160.000374
ORF1ab/nsp12884Y884YtaCtaT11Q.30.000145