CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = Y788Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12788Y788YY5180YsyntaTtaC575575115802-15804

Details of the mutation Y788Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12788Y788YtaTtaC575575All0.00011
ORF1ab/nsp12788Y788YtaTtaC110110B.1.1.70.000098
ORF1ab/nsp12788Y788YtaTtaC5959A.150.936508
ORF1ab/nsp12788Y788YtaTtaC4949AY.40.000076
ORF1ab/nsp12788Y788YtaTtaC4444B.1.177.40.009287
ORF1ab/nsp12788Y788YtaTtaC3636AY.430.000159
ORF1ab/nsp12788Y788YtaTtaC2424B.1.1.1440.685714
ORF1ab/nsp12788Y788YtaTtaC1818B.1.617.20.000068
ORF1ab/nsp12788Y788YtaTtaC1616AY.250.000096
ORF1ab/nsp12788Y788YtaTtaC1414AY.440.000085
ORF1ab/nsp12788Y788YtaTtaC1414AY.560.022472
ORF1ab/nsp12788Y788YtaTtaC1313AY.1030.000081
ORF1ab/nsp12788Y788YtaTtaC1313AY.50.000268
ORF1ab/nsp12788Y788YtaTtaC1313P.10.000205
ORF1ab/nsp12788Y788YtaTtaC1010AY.1190.000353
ORF1ab/nsp12788Y788YtaTtaC1010B.1.20.000088
ORF1ab/nsp12788Y788YtaTtaC88AY.290.000126
ORF1ab/nsp12788Y788YtaTtaC77AY.260.000198
ORF1ab/nsp12788Y788YtaTtaC77B.1.3510.000208
ORF1ab/nsp12788Y788YtaTtaC66B.1.2580.000399
ORF1ab/nsp12788Y788YtaTtaC55AY.1020.000133
ORF1ab/nsp12788Y788YtaTtaC55B.1.110.30.003592
ORF1ab/nsp12788Y788YtaTtaC55B.1.1770.000066
ORF1ab/nsp12788Y788YtaTtaC44AY.30.00004
ORF1ab/nsp12788Y788YtaTtaC44AY.370.001264
ORF1ab/nsp12788Y788YtaTtaC44AY.390.000099
ORF1ab/nsp12788Y788YtaTtaC44AY.98.10.000194
ORF1ab/nsp12788Y788YtaTtaC44B.10.000037
ORF1ab/nsp12788Y788YtaTtaC44B.1.360.000584
ORF1ab/nsp12788Y788YtaTtaC44B.1.5260.000094
ORF1ab/nsp12788Y788YtaTtaC44B.1.6210.000354
ORF1ab/nsp12788Y788YtaTtaC33AY.330.0002
ORF1ab/nsp12788Y788YtaTtaC33AY.60.000123
ORF1ab/nsp12788Y788YtaTtaC33B.1.1.3170.001235
ORF1ab/nsp12788Y788YtaTtaC33B.1.1.5190.000119
ORF1ab/nsp12788Y788YtaTtaC33B.1.1.630.001157
ORF1ab/nsp12788Y788YtaTtaC33C.370.000348
ORF1ab/nsp12788Y788YtaTtaC22A.20.001324
ORF1ab/nsp12788Y788YtaTtaC22AY.39.10.000079
ORF1ab/nsp12788Y788YtaTtaC22B.1.177.210.000153
ORF1ab/nsp12788Y788YtaTtaC22B.1.4290.000047
ORF1ab/nsp12788Y788YtaTtaC11AY.1130.000142
ORF1ab/nsp12788Y788YtaTtaC11AY.1160.000287
ORF1ab/nsp12788Y788YtaTtaC11AY.1200.000037
ORF1ab/nsp12788Y788YtaTtaC11AY.160.00038
ORF1ab/nsp12788Y788YtaTtaC11AY.200.000039
ORF1ab/nsp12788Y788YtaTtaC11AY.380.000499
ORF1ab/nsp12788Y788YtaTtaC11AY.39.1.10.000725
ORF1ab/nsp12788Y788YtaTtaC11AY.470.000031
ORF1ab/nsp12788Y788YtaTtaC11AY.530.000288
ORF1ab/nsp12788Y788YtaTtaC11AY.610.000105
ORF1ab/nsp12788Y788YtaTtaC11AY.710.000475
ORF1ab/nsp12788Y788YtaTtaC11AY.75.10.00018
ORF1ab/nsp12788Y788YtaTtaC11AY.9.20.000037
ORF1ab/nsp12788Y788YtaTtaC11AZ.20.000821
ORF1ab/nsp12788Y788YtaTtaC11B0.000128
ORF1ab/nsp12788Y788YtaTtaC11B.1.10.000018
ORF1ab/nsp12788Y788YtaTtaC11B.1.1.280.000311
ORF1ab/nsp12788Y788YtaTtaC11B.1.1.3060.000438
ORF1ab/nsp12788Y788YtaTtaC11B.1.177.100.000878
ORF1ab/nsp12788Y788YtaTtaC11B.1.177.230.003236
ORF1ab/nsp12788Y788YtaTtaC11B.1.177.550.002331
ORF1ab/nsp12788Y788YtaTtaC11B.1.177.600.000218
ORF1ab/nsp12788Y788YtaTtaC11B.1.3290.000608
ORF1ab/nsp12788Y788YtaTtaC11B.1.351.20.000303
ORF1ab/nsp12788Y788YtaTtaC11B.1.36.350.002604
ORF1ab/nsp12788Y788YtaTtaC11B.1.4990.00105
ORF1ab/nsp12788Y788YtaTtaC11B.1.5760.000907
ORF1ab/nsp12788Y788YtaTtaC11P.1.10.000318
ORF1ab/nsp12788Y788YtaTtaC11P.1.20.001156
ORF1ab/nsp12788Y788YtaTtaC11P.20.000187
ORF1ab/nsp12788Y788YtaTtaC11R.10.00009