CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 479 | Y479Y | Y4871Y | syn | taC | taT | 4829 | 4829 | 1 | 14875-14877 |
Details of the mutation Y479Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4829 | 4829 | All | 0.000924 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1427 | 1427 | B.1.1.7 | 0.001277 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 447 | 447 | AY.25 | 0.002689 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 296 | 296 | B.1.617.2 | 0.001115 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 263 | 263 | AY.4 | 0.000409 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 147 | 147 | AY.9.2 | 0.005399 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 125 | 125 | B.1 | 0.001145 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 124 | 124 | B.1.2 | 0.001092 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 106 | 106 | B.1.177 | 0.001396 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 97 | 97 | B.1.1.29 | 1 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 91 | 91 | AY.43 | 0.000403 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 88 | 88 | AY.103 | 0.000546 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 78 | 78 | AY.44 | 0.000475 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 67 | 67 | AY.102 | 0.001776 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 65 | 65 | P.1 | 0.001024 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 63 | 63 | B.1.1 | 0.001143 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 58 | 58 | A.1 | 0.016347 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 50 | 50 | B.1.1.487 | 0.27933 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 49 | 49 | B.1.1.318 | 0.014786 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 45 | 45 | AY.39 | 0.001112 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 44 | 44 | B.1.1.174 | 0.148649 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 43 | 43 | B.1.429 | 0.001012 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 43 | 43 | C.32 | 1 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 38 | 38 | AY.3 | 0.000378 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 37 | 37 | AE.8 | 0.018093 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 33 | 33 | AY.119 | 0.001165 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 31 | 31 | AY.98 | 0.002449 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 28 | 28 | P.1.15 | 0.006506 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 26 | 26 | P.1.14 | 0.001243 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 24 | 24 | AY.41 | 0.007055 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 24 | 24 | B.1.526 | 0.000564 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 23 | 23 | B.1.1.519 | 0.000913 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 23 | 23 | B.1.160 | 0.000717 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 20 | 20 | B.1.351 | 0.000595 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 20 | 20 | B.1.427 | 0.00101 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 19 | 19 | B.1.577 | 0.013058 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 18 | 18 | B.1.258.14 | 0.017647 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 17 | 17 | AY.20 | 0.000661 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 16 | 16 | AY.26 | 0.000453 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 16 | 16 | AY.5 | 0.00033 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 16 | 16 | AY.75 | 0.000896 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 16 | 16 | B.1.1.214 | 0.000887 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 14 | 14 | AY.100 | 0.000644 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 14 | 14 | B.1.1.63 | 0.005401 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 13 | 13 | AY.9 | 0.000879 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | AY.118 | 0.000689 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | AY.61 | 0.001153 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | B | 0.001406 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | B.1.1.216 | 0.009795 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | B.1.243 | 0.000765 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 11 | 11 | B.1.567 | 0.036667 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 10 | 10 | AY.29 | 0.000158 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 10 | 10 | B.1.1.50 | 0.006789 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 10 | 10 | B.1.177.80 | 0.01912 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 10 | 10 | B.1.177.86 | 0.001835 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 10 | 10 | B.1.561 | 0.00397 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 9 | 9 | AY.47 | 0.00028 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 9 | 9 | B.1.596 | 0.000784 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 8 | 8 | AY.98.1 | 0.000387 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 7 | 7 | AY.45 | 0.000852 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 7 | 7 | B.1.126 | 0.008929 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 7 | 7 | B.1.234 | 0.000924 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 7 | 7 | B.1.524 | 0.009845 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | AU.3 | 0.012658 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | AY.85 | 0.002563 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | AY.9.1 | 0.000502 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | B.1.177.58 | 0.007989 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 6 | 6 | B.1.177.82 | 0.002864 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | AY.69 | 0.000933 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | AY.75.1 | 0.000902 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | B.1.177.60 | 0.001092 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | B.1.389 | 0.00501 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 5 | 5 | B.1.544 | 0.03012 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.27 | 0.000259 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.70 | 0.000834 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.71 | 0.0019 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | AY.79 | 0.004843 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.1.311 | 0.001433 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.177.68 | 0.060606 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.177.72 | 0.013559 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.36.18 | 0.001681 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.621 | 0.000354 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.66 | 0.003209 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.351.2 | 0.000908 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.428 | 0.003061 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | B.1.8 | 0.005917 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 3 | 3 | P.3 | 0.004785 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | 0.111111 | |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | A.2.5.1 | 0.009615 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.1.265 | 0.006309 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.1.362 | 0.011236 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.111 | 0.00235 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | B.1.9 | 0.012346 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | C.14 | 0.008658 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.236 | 0.006897 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.419 | 0.007407 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.518 | 0.006329 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.270 | 0.005618 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.302 | 0.013333 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.36.9 | 0.003215 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.510 | 0.026316 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.1.629 | 0.013333 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.26 | 0.014706 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | C.18 | 0.002591 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp12 | 479 | Y479Y | taC | taT | 1 | 1 | Q.1 | 0.000126 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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