CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = Y479Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12479Y479YY4871YsyntaCtaT48294829114875-14877

Details of the mutation Y479Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12479Y479YtaCtaT48294829All0.000924
ORF1ab/nsp12479Y479YtaCtaT14271427B.1.1.70.001277
ORF1ab/nsp12479Y479YtaCtaT447447AY.250.002689
ORF1ab/nsp12479Y479YtaCtaT296296B.1.617.20.001115
ORF1ab/nsp12479Y479YtaCtaT263263AY.40.000409
ORF1ab/nsp12479Y479YtaCtaT147147AY.9.20.005399
ORF1ab/nsp12479Y479YtaCtaT125125B.10.001145
ORF1ab/nsp12479Y479YtaCtaT124124B.1.20.001092
ORF1ab/nsp12479Y479YtaCtaT106106B.1.1770.001396
ORF1ab/nsp12479Y479YtaCtaT9797B.1.1.291
ORF1ab/nsp12479Y479YtaCtaT9191AY.430.000403
ORF1ab/nsp12479Y479YtaCtaT8888AY.1030.000546
ORF1ab/nsp12479Y479YtaCtaT7878AY.440.000475
ORF1ab/nsp12479Y479YtaCtaT6767AY.1020.001776
ORF1ab/nsp12479Y479YtaCtaT6565P.10.001024
ORF1ab/nsp12479Y479YtaCtaT6363B.1.10.001143
ORF1ab/nsp12479Y479YtaCtaT5858A.10.016347
ORF1ab/nsp12479Y479YtaCtaT5050B.1.1.4870.27933
ORF1ab/nsp12479Y479YtaCtaT4949B.1.1.3180.014786
ORF1ab/nsp12479Y479YtaCtaT4545AY.390.001112
ORF1ab/nsp12479Y479YtaCtaT4444B.1.1.1740.148649
ORF1ab/nsp12479Y479YtaCtaT4343B.1.4290.001012
ORF1ab/nsp12479Y479YtaCtaT4343C.321
ORF1ab/nsp12479Y479YtaCtaT3838AY.30.000378
ORF1ab/nsp12479Y479YtaCtaT3737AE.80.018093
ORF1ab/nsp12479Y479YtaCtaT3333AY.1190.001165
ORF1ab/nsp12479Y479YtaCtaT3131AY.980.002449
ORF1ab/nsp12479Y479YtaCtaT2828P.1.150.006506
ORF1ab/nsp12479Y479YtaCtaT2626P.1.140.001243
ORF1ab/nsp12479Y479YtaCtaT2424AY.410.007055
ORF1ab/nsp12479Y479YtaCtaT2424B.1.5260.000564
ORF1ab/nsp12479Y479YtaCtaT2323B.1.1.5190.000913
ORF1ab/nsp12479Y479YtaCtaT2323B.1.1600.000717
ORF1ab/nsp12479Y479YtaCtaT2020B.1.3510.000595
ORF1ab/nsp12479Y479YtaCtaT2020B.1.4270.00101
ORF1ab/nsp12479Y479YtaCtaT1919B.1.5770.013058
ORF1ab/nsp12479Y479YtaCtaT1818B.1.258.140.017647
ORF1ab/nsp12479Y479YtaCtaT1717AY.200.000661
ORF1ab/nsp12479Y479YtaCtaT1616AY.260.000453
ORF1ab/nsp12479Y479YtaCtaT1616AY.50.00033
ORF1ab/nsp12479Y479YtaCtaT1616AY.750.000896
ORF1ab/nsp12479Y479YtaCtaT1616B.1.1.2140.000887
ORF1ab/nsp12479Y479YtaCtaT1414AY.1000.000644
ORF1ab/nsp12479Y479YtaCtaT1414B.1.1.630.005401
ORF1ab/nsp12479Y479YtaCtaT1313AY.90.000879
ORF1ab/nsp12479Y479YtaCtaT1111AY.1180.000689
ORF1ab/nsp12479Y479YtaCtaT1111AY.610.001153
ORF1ab/nsp12479Y479YtaCtaT1111B0.001406
ORF1ab/nsp12479Y479YtaCtaT1111B.1.1.2160.009795
ORF1ab/nsp12479Y479YtaCtaT1111B.1.2430.000765
ORF1ab/nsp12479Y479YtaCtaT1111B.1.5670.036667
ORF1ab/nsp12479Y479YtaCtaT1010AY.290.000158
ORF1ab/nsp12479Y479YtaCtaT1010B.1.1.500.006789
ORF1ab/nsp12479Y479YtaCtaT1010B.1.177.800.01912
ORF1ab/nsp12479Y479YtaCtaT1010B.1.177.860.001835
ORF1ab/nsp12479Y479YtaCtaT1010B.1.5610.00397
ORF1ab/nsp12479Y479YtaCtaT99AY.470.00028
ORF1ab/nsp12479Y479YtaCtaT99B.1.5960.000784
ORF1ab/nsp12479Y479YtaCtaT88AY.230.000558
ORF1ab/nsp12479Y479YtaCtaT88AY.98.10.000387
ORF1ab/nsp12479Y479YtaCtaT88B.1.2210.000568
ORF1ab/nsp12479Y479YtaCtaT77AY.450.000852
ORF1ab/nsp12479Y479YtaCtaT77B.1.1260.008929
ORF1ab/nsp12479Y479YtaCtaT77B.1.2340.000924
ORF1ab/nsp12479Y479YtaCtaT77B.1.5240.009845
ORF1ab/nsp12479Y479YtaCtaT66AU.30.012658
ORF1ab/nsp12479Y479YtaCtaT66AY.3.10.000512
ORF1ab/nsp12479Y479YtaCtaT66AY.46.60.000433
ORF1ab/nsp12479Y479YtaCtaT66AY.850.002563
ORF1ab/nsp12479Y479YtaCtaT66AY.9.10.000502
ORF1ab/nsp12479Y479YtaCtaT66B.1.177.580.007989
ORF1ab/nsp12479Y479YtaCtaT66B.1.177.820.002864
ORF1ab/nsp12479Y479YtaCtaT55AY.690.000933
ORF1ab/nsp12479Y479YtaCtaT55AY.75.10.000902
ORF1ab/nsp12479Y479YtaCtaT55B.1.177.600.001092
ORF1ab/nsp12479Y479YtaCtaT55B.1.360.00073
ORF1ab/nsp12479Y479YtaCtaT55B.1.3890.00501
ORF1ab/nsp12479Y479YtaCtaT55B.1.5250.000566
ORF1ab/nsp12479Y479YtaCtaT55B.1.5440.03012
ORF1ab/nsp12479Y479YtaCtaT44AY.270.000259
ORF1ab/nsp12479Y479YtaCtaT44AY.4.20.000087
ORF1ab/nsp12479Y479YtaCtaT44AY.420.000161
ORF1ab/nsp12479Y479YtaCtaT44AY.700.000834
ORF1ab/nsp12479Y479YtaCtaT44AY.710.0019
ORF1ab/nsp12479Y479YtaCtaT44AY.790.004843
ORF1ab/nsp12479Y479YtaCtaT44B.1.1.10.001307
ORF1ab/nsp12479Y479YtaCtaT44B.1.1.3060.001754
ORF1ab/nsp12479Y479YtaCtaT44B.1.1.3110.001433
ORF1ab/nsp12479Y479YtaCtaT44B.1.177.680.060606
ORF1ab/nsp12479Y479YtaCtaT44B.1.177.720.013559
ORF1ab/nsp12479Y479YtaCtaT44B.1.36.180.001681
ORF1ab/nsp12479Y479YtaCtaT44B.1.6210.000354
ORF1ab/nsp12479Y479YtaCtaT44B.1.6370.000292
ORF1ab/nsp12479Y479YtaCtaT44Q.80.00066
ORF1ab/nsp12479Y479YtaCtaT33AY.1140.000693
ORF1ab/nsp12479Y479YtaCtaT33AY.140.000264
ORF1ab/nsp12479Y479YtaCtaT33AY.39.10.000119
ORF1ab/nsp12479Y479YtaCtaT33AY.4.50.000322
ORF1ab/nsp12479Y479YtaCtaT33AY.5.30.001012
ORF1ab/nsp12479Y479YtaCtaT33AY.550.002752
ORF1ab/nsp12479Y479YtaCtaT33AY.660.003209
ORF1ab/nsp12479Y479YtaCtaT33AY.670.001393
ORF1ab/nsp12479Y479YtaCtaT33AY.99.20.000276
ORF1ab/nsp12479Y479YtaCtaT33B.1.1.2220.000612
ORF1ab/nsp12479Y479YtaCtaT33B.1.1.2910.002227
ORF1ab/nsp12479Y479YtaCtaT33B.1.1.330.001263
ORF1ab/nsp12479Y479YtaCtaT33B.1.1.700.001023
ORF1ab/nsp12479Y479YtaCtaT33B.1.351.20.000908
ORF1ab/nsp12479Y479YtaCtaT33B.1.4280.003061
ORF1ab/nsp12479Y479YtaCtaT33B.1.5950.000783
ORF1ab/nsp12479Y479YtaCtaT33B.1.80.005917
ORF1ab/nsp12479Y479YtaCtaT33P.1.120.001452
ORF1ab/nsp12479Y479YtaCtaT33P.30.004785
ORF1ab/nsp12479Y479YtaCtaT220.111111
ORF1ab/nsp12479Y479YtaCtaT22A.2.5.10.009615
ORF1ab/nsp12479Y479YtaCtaT22AY.1110.000366
ORF1ab/nsp12479Y479YtaCtaT22AY.1170.000169
ORF1ab/nsp12479Y479YtaCtaT22AY.1200.000074
ORF1ab/nsp12479Y479YtaCtaT22AY.130.000322
ORF1ab/nsp12479Y479YtaCtaT22AY.330.000134
ORF1ab/nsp12479Y479YtaCtaT22AY.360.000296
ORF1ab/nsp12479Y479YtaCtaT22AY.380.000999
ORF1ab/nsp12479Y479YtaCtaT22AY.4.2.10.000298
ORF1ab/nsp12479Y479YtaCtaT22AY.400.001929
ORF1ab/nsp12479Y479YtaCtaT22AY.46.50.000397
ORF1ab/nsp12479Y479YtaCtaT22AY.5.40.000553
ORF1ab/nsp12479Y479YtaCtaT22AY.540.000191
ORF1ab/nsp12479Y479YtaCtaT22AY.740.000231
ORF1ab/nsp12479Y479YtaCtaT22AY.840.000875
ORF1ab/nsp12479Y479YtaCtaT22AY.900.001369
ORF1ab/nsp12479Y479YtaCtaT22AY.910.001461
ORF1ab/nsp12479Y479YtaCtaT22AY.920.000575
ORF1ab/nsp12479Y479YtaCtaT22AY.940.000885
ORF1ab/nsp12479Y479YtaCtaT22B.1.1.250.001137
ORF1ab/nsp12479Y479YtaCtaT22B.1.1.2650.006309
ORF1ab/nsp12479Y479YtaCtaT22B.1.1.3620.011236
ORF1ab/nsp12479Y479YtaCtaT22B.1.1.4320.002532
ORF1ab/nsp12479Y479YtaCtaT22B.1.1110.00235
ORF1ab/nsp12479Y479YtaCtaT22B.1.177.120.000303
ORF1ab/nsp12479Y479YtaCtaT22B.1.177.170.001642
ORF1ab/nsp12479Y479YtaCtaT22B.1.177.540.001213
ORF1ab/nsp12479Y479YtaCtaT22B.1.2580.000133
ORF1ab/nsp12479Y479YtaCtaT22B.1.258.170.000208
ORF1ab/nsp12479Y479YtaCtaT22B.1.3670.001585
ORF1ab/nsp12479Y479YtaCtaT22B.1.466.20.000782
ORF1ab/nsp12479Y479YtaCtaT22B.1.617.10.000258
ORF1ab/nsp12479Y479YtaCtaT22B.1.90.012346
ORF1ab/nsp12479Y479YtaCtaT22C.140.008658
ORF1ab/nsp12479Y479YtaCtaT22C.370.000232
ORF1ab/nsp12479Y479YtaCtaT22D.20.00015
ORF1ab/nsp12479Y479YtaCtaT22P.1.70.000639
ORF1ab/nsp12479Y479YtaCtaT11A.20.000662
ORF1ab/nsp12479Y479YtaCtaT11A.2.40.003367
ORF1ab/nsp12479Y479YtaCtaT11AY.1060.000335
ORF1ab/nsp12479Y479YtaCtaT11AY.1080.001103
ORF1ab/nsp12479Y479YtaCtaT11AY.110.001339
ORF1ab/nsp12479Y479YtaCtaT11AY.1130.000142
ORF1ab/nsp12479Y479YtaCtaT11AY.1160.000287
ORF1ab/nsp12479Y479YtaCtaT11AY.190.00114
ORF1ab/nsp12479Y479YtaCtaT11AY.350.000233
ORF1ab/nsp12479Y479YtaCtaT11AY.460.000104
ORF1ab/nsp12479Y479YtaCtaT11AY.480.000465
ORF1ab/nsp12479Y479YtaCtaT11AY.60.000041
ORF1ab/nsp12479Y479YtaCtaT11AY.600.000938
ORF1ab/nsp12479Y479YtaCtaT11AY.680.000274
ORF1ab/nsp12479Y479YtaCtaT11AY.7.20.000559
ORF1ab/nsp12479Y479YtaCtaT11AY.800.001129
ORF1ab/nsp12479Y479YtaCtaT11AY.870.000833
ORF1ab/nsp12479Y479YtaCtaT11AY.960.002075
ORF1ab/nsp12479Y479YtaCtaT11AY.970.001701
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.1570.000913
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.2360.006897
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.2410.00207
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.2790.001121
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.280.000311
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.370.000193
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.3720.000689
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.3770.001381
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.390.00051
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.4190.007407
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.4640.001473
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.5180.006329
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.5210.005348
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.5230.001563
ORF1ab/nsp12479Y479YtaCtaT11B.1.1.540.003021
ORF1ab/nsp12479Y479YtaCtaT11B.1.1280.000635
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.200.001517
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.210.000076
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.230.003236
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.330.001645
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.400.005155
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.440.000519
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.620.001192
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.70.000165
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.810.000189
ORF1ab/nsp12479Y479YtaCtaT11B.1.177.870.000728
ORF1ab/nsp12479Y479YtaCtaT11B.1.2700.005618
ORF1ab/nsp12479Y479YtaCtaT11B.1.2790.000514
ORF1ab/nsp12479Y479YtaCtaT11B.1.3020.013333
ORF1ab/nsp12479Y479YtaCtaT11B.1.3330.010526
ORF1ab/nsp12479Y479YtaCtaT11B.1.351.30.000876
ORF1ab/nsp12479Y479YtaCtaT11B.1.36.10.00114
ORF1ab/nsp12479Y479YtaCtaT11B.1.36.80.001
ORF1ab/nsp12479Y479YtaCtaT11B.1.36.90.003215
ORF1ab/nsp12479Y479YtaCtaT11B.1.3690.000285
ORF1ab/nsp12479Y479YtaCtaT11B.1.3960.000706
ORF1ab/nsp12479Y479YtaCtaT11B.1.438.10.000107
ORF1ab/nsp12479Y479YtaCtaT11B.1.4590.004082
ORF1ab/nsp12479Y479YtaCtaT11B.1.5100.026316
ORF1ab/nsp12479Y479YtaCtaT11B.1.5750.000303
ORF1ab/nsp12479Y479YtaCtaT11B.1.6180.004032
ORF1ab/nsp12479Y479YtaCtaT11B.1.6290.013333
ORF1ab/nsp12479Y479YtaCtaT11B.260.014706
ORF1ab/nsp12479Y479YtaCtaT11B.390.002331
ORF1ab/nsp12479Y479YtaCtaT11B.60.00091
ORF1ab/nsp12479Y479YtaCtaT11C.180.002591
ORF1ab/nsp12479Y479YtaCtaT11C.350.000774
ORF1ab/nsp12479Y479YtaCtaT11N.50.001767
ORF1ab/nsp12479Y479YtaCtaT11N.60.007092
ORF1ab/nsp12479Y479YtaCtaT11P.1.10.000318
ORF1ab/nsp12479Y479YtaCtaT11P.1.170.000162
ORF1ab/nsp12479Y479YtaCtaT11Q.10.000126