CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = V720A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12720V720AV5112AnonsyngTcgCc2922910.99657515598-15600
ORF1ab/nsp12720V720AV5112AnonsyngTCgCA29210.0034246615598-15600

Details of the mutation V720A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12720V720AgTcgCc291292All0.000056
ORF1ab/nsp12720V720AgTCgCA1292All0
ORF1ab/nsp12720V720AgTcgCc212212B.1.5260.004983
ORF1ab/nsp12720V720AgTcgCc1414B.1.617.20.000053
ORF1ab/nsp12720V720AgTcgCc77AY.40.000011
ORF1ab/nsp12720V720AgTcgCc67B.1.1.70.000005
ORF1ab/nsp12720V720AgTCgCA17B.1.1.70.000001
ORF1ab/nsp12720V720AgTcgCc66AY.610.000629
ORF1ab/nsp12720V720AgTcgCc55AY.1210.000677
ORF1ab/nsp12720V720AgTcgCc33AY.260.000085
ORF1ab/nsp12720V720AgTcgCc33AY.600.002814
ORF1ab/nsp12720V720AgTcgCc33B.10.000027
ORF1ab/nsp12720V720AgTcgCc22AY.1020.000053
ORF1ab/nsp12720V720AgTcgCc22AY.1030.000012
ORF1ab/nsp12720V720AgTcgCc22AY.130.000322
ORF1ab/nsp12720V720AgTcgCc22AY.430.000009
ORF1ab/nsp12720V720AgTcgCc22AY.470.000062
ORF1ab/nsp12720V720AgTcgCc22B.1.20.000018
ORF1ab/nsp12720V720AgTcgCc22B.1.5950.000522
ORF1ab/nsp12720V720AgTcgCc11AY.1000.000046
ORF1ab/nsp12720V720AgTcgCc11AY.1100.000113
ORF1ab/nsp12720V720AgTcgCc11AY.270.000065
ORF1ab/nsp12720V720AgTcgCc11AY.320.000532
ORF1ab/nsp12720V720AgTcgCc11AY.340.000097
ORF1ab/nsp12720V720AgTcgCc11AY.460.000104
ORF1ab/nsp12720V720AgTcgCc11B.1.10.000018
ORF1ab/nsp12720V720AgTcgCc11B.1.1.4340.000349
ORF1ab/nsp12720V720AgTcgCc11B.1.160.260.002421
ORF1ab/nsp12720V720AgTcgCc11B.1.177.210.000076
ORF1ab/nsp12720V720AgTcgCc11B.1.177.590.016129
ORF1ab/nsp12720V720AgTcgCc11B.1.3110.000275
ORF1ab/nsp12720V720AgTcgCc11B.1.3510.00003
ORF1ab/nsp12720V720AgTcgCc11B.1.5750.000303
ORF1ab/nsp12720V720AgTcgCc11B.1.5820.000491
ORF1ab/nsp12720V720AgTcgCc11B.1.617.10.000129
ORF1ab/nsp12720V720AgTcgCc11P.10.000016
ORF1ab/nsp12720V720AgTcgCc11Q.80.000165