CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = V560F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12560V560FV4952FnonsynGtcTtc1290.7515118-15120
ORF1ab/nsp12560V560FV4952FnonsynGtCTtT1230.2515118-15120

Details of the mutation V560F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12560V560FGtcTtc912All0.000002
ORF1ab/nsp12560V560FGtCTtT312All0.000001
ORF1ab/nsp12560V560FGtcTtc360.166667
ORF1ab/nsp12560V560FGtCTtT360.166667
ORF1ab/nsp12560V560FGtcTtc22B.10.000018
ORF1ab/nsp12560V560FGtcTtc22B.1.20.000018
ORF1ab/nsp12560V560FGtcTtc11A.2.40.003367
ORF1ab/nsp12560V560FGtcTtc11B.1.617.20.000004