CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = V354L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12354V354LV4746LnonsynGtaTta252625150.99564514500-14502
ORF1ab/nsp12354V354LV4746LnonsynGtaCta2526110.0043547114500-14502

Details of the mutation V354L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12354V354LGtaTta25152526All0.000481
ORF1ab/nsp12354V354LGtaCta112526All0.000002
ORF1ab/nsp12354V354LGtaTta775775B.1.20.006824
ORF1ab/nsp12354V354LGtaTta344346B.1.1.70.000308
ORF1ab/nsp12354V354LGtaCta2346B.1.1.70.000002
ORF1ab/nsp12354V354LGtaTta168168B.1.1770.002212
ORF1ab/nsp12354V354LGtaTta125126AY.40.000195
ORF1ab/nsp12354V354LGtaCta1126AY.40.000002
ORF1ab/nsp12354V354LGtaTta9395AY.430.000412
ORF1ab/nsp12354V354LGtaCta295AY.430.000009
ORF1ab/nsp12354V354LGtaTta9495B.1.617.20.000354
ORF1ab/nsp12354V354LGtaCta195B.1.617.20.000004
ORF1ab/nsp12354V354LGtaTta9494B.1.1600.002932
ORF1ab/nsp12354V354LGtaTta9090AS.10.857143
ORF1ab/nsp12354V354LGtaTta7575B.10.000687
ORF1ab/nsp12354V354LGtaTta3839AY.1030.000236
ORF1ab/nsp12354V354LGtaCta139AY.1030.000006
ORF1ab/nsp12354V354LGtaTta3737AY.440.000225
ORF1ab/nsp12354V354LGtaTta3535AY.30.000348
ORF1ab/nsp12354V354LGtaTta3131AY.1170.00262
ORF1ab/nsp12354V354LGtaTta2022AY.250.00012
ORF1ab/nsp12354V354LGtaCta222AY.250.000012
ORF1ab/nsp12354V354LGtaTta1919AY.9.20.000698
ORF1ab/nsp12354V354LGtaTta1919B.1.2580.001264
ORF1ab/nsp12354V354LGtaTta1818AY.46.60.0013
ORF1ab/nsp12354V354LGtaTta1515AY.4.20.000325
ORF1ab/nsp12354V354LGtaTta1515B.1.1.5190.000596
ORF1ab/nsp12354V354LGtaTta1313AY.1200.000483
ORF1ab/nsp12354V354LGtaTta1111AY.1100.00124
ORF1ab/nsp12354V354LGtaTta1111AY.470.000342
ORF1ab/nsp12354V354LGtaTta1010A0.00387
ORF1ab/nsp12354V354LGtaTta1010AY.1020.000265
ORF1ab/nsp12354V354LGtaTta1010AY.260.000283
ORF1ab/nsp12354V354LGtaTta1010AY.60.000411
ORF1ab/nsp12354V354LGtaTta1010B.1.1.3060.004384
ORF1ab/nsp12354V354LGtaTta1010B.1.438.10.001073
ORF1ab/nsp12354V354LGtaTta99B.1.10.000163
ORF1ab/nsp12354V354LGtaTta88AY.200.000311
ORF1ab/nsp12354V354LGtaTta88AY.980.000632
ORF1ab/nsp12354V354LGtaTta88AY.98.10.000387
ORF1ab/nsp12354V354LGtaTta88B.1.4000.003432
ORF1ab/nsp12354V354LGtaTta77AY.460.000729
ORF1ab/nsp12354V354LGtaTta77B.1.1.3110.002507
ORF1ab/nsp12354V354LGtaTta77B.1.1.330.002946
ORF1ab/nsp12354V354LGtaTta77B.1.360.001021
ORF1ab/nsp12354V354LGtaTta66AY.1000.000276
ORF1ab/nsp12354V354LGtaTta66AY.330.000401
ORF1ab/nsp12354V354LGtaTta66B.1.221.30.005
ORF1ab/nsp12354V354LGtaTta55A.20.003309
ORF1ab/nsp12354V354LGtaTta55AY.1130.000712
ORF1ab/nsp12354V354LGtaTta55B.1.1.2280.015244
ORF1ab/nsp12354V354LGtaTta55B.1.5250.000566
ORF1ab/nsp12354V354LGtaTta55B.1.5460.018519
ORF1ab/nsp12354V354LGtaTta44AY.1180.000251
ORF1ab/nsp12354V354LGtaTta44AY.1190.000141
ORF1ab/nsp12354V354LGtaTta44AY.360.000593
ORF1ab/nsp12354V354LGtaTta44AY.390.000099
ORF1ab/nsp12354V354LGtaTta44AY.50.000083
ORF1ab/nsp12354V354LGtaTta44AY.90.00027
ORF1ab/nsp12354V354LGtaTta44B.1.1.1530.004381
ORF1ab/nsp12354V354LGtaTta44B.1.1.280.001245
ORF1ab/nsp12354V354LGtaTta44B.1.36.160.005698
ORF1ab/nsp12354V354LGtaTta44B.1.5260.000094
ORF1ab/nsp12354V354LGtaTta44P.10.000063
ORF1ab/nsp12354V354LGtaTta44Q.10.000505
ORF1ab/nsp12354V354LGtaTta33AY.1110.000549
ORF1ab/nsp12354V354LGtaTta33AY.1160.00086
ORF1ab/nsp12354V354LGtaTta33AY.1210.000406
ORF1ab/nsp12354V354LGtaTta33AY.290.000047
ORF1ab/nsp12354V354LGtaTta33AY.610.000314
ORF1ab/nsp12354V354LGtaTta33AY.830.005172
ORF1ab/nsp12354V354LGtaTta33B.1.1.1570.00274
ORF1ab/nsp12354V354LGtaTta33B.1.1.4090.008499
ORF1ab/nsp12354V354LGtaTta33B.1.1.700.001023
ORF1ab/nsp12354V354LGtaTta33B.1.4290.000071
ORF1ab/nsp12354V354LGtaTta33B.1.5960.000261
ORF1ab/nsp12354V354LGtaTta33B.1.6280.001057
ORF1ab/nsp12354V354LGtaTta33D.20.000225
ORF1ab/nsp12354V354LGtaTta33P.1.120.001452
ORF1ab/nsp12354V354LGtaTta220.111111
ORF1ab/nsp12354V354LGtaTta22AY.116.10.000623
ORF1ab/nsp12354V354LGtaTta22AY.120.20.002571
ORF1ab/nsp12354V354LGtaTta22AY.420.00008
ORF1ab/nsp12354V354LGtaTta22AY.5.10.007519
ORF1ab/nsp12354V354LGtaTta22AY.540.000191
ORF1ab/nsp12354V354LGtaTta22AY.630.000774
ORF1ab/nsp12354V354LGtaTta22AY.750.000112
ORF1ab/nsp12354V354LGtaTta22B0.000256
ORF1ab/nsp12354V354LGtaTta22B.1.1.2940.002532
ORF1ab/nsp12354V354LGtaTta22B.1.1.3680.006173
ORF1ab/nsp12354V354LGtaTta22B.1.1.630.000772
ORF1ab/nsp12354V354LGtaTta22B.1.1430.042553
ORF1ab/nsp12354V354LGtaTta22B.1.177.730.001133
ORF1ab/nsp12354V354LGtaTta22B.1.2350.005038
ORF1ab/nsp12354V354LGtaTta22B.1.3690.00057
ORF1ab/nsp12354V354LGtaTta22B.1.4620.014493
ORF1ab/nsp12354V354LGtaTta22B.1.466.20.000782
ORF1ab/nsp12354V354LGtaTta22B.1.5750.000607
ORF1ab/nsp12354V354LGtaTta22C.360.001821
ORF1ab/nsp12354V354LGtaTta22P.20.000373
ORF1ab/nsp12354V354LGtaTta22P.60.006289
ORF1ab/nsp12354V354LGtaTta11AM.40.003571
ORF1ab/nsp12354V354LGtaTta11AY.1050.000643
ORF1ab/nsp12354V354LGtaTta11AY.1140.000231
ORF1ab/nsp12354V354LGtaTta11AY.120.000316
ORF1ab/nsp12354V354LGtaTta11AY.16.10.00047
ORF1ab/nsp12354V354LGtaTta11AY.230.00007
ORF1ab/nsp12354V354LGtaTta11AY.240.000431
ORF1ab/nsp12354V354LGtaTta11AY.270.000065
ORF1ab/nsp12354V354LGtaTta11AY.29.10.000221
ORF1ab/nsp12354V354LGtaTta11AY.3.10.000085
ORF1ab/nsp12354V354LGtaTta11AY.34.10.00051
ORF1ab/nsp12354V354LGtaTta11AY.370.000316
ORF1ab/nsp12354V354LGtaTta11AY.380.000499
ORF1ab/nsp12354V354LGtaTta11AY.4.40.000409
ORF1ab/nsp12354V354LGtaTta11AY.490.003195
ORF1ab/nsp12354V354LGtaTta11AY.620.000436
ORF1ab/nsp12354V354LGtaTta11AY.680.000274
ORF1ab/nsp12354V354LGtaTta11AY.710.000475
ORF1ab/nsp12354V354LGtaTta11AY.740.000116
ORF1ab/nsp12354V354LGtaTta11AY.75.10.00018
ORF1ab/nsp12354V354LGtaTta11AY.790.001211
ORF1ab/nsp12354V354LGtaTta11AY.950.000761
ORF1ab/nsp12354V354LGtaTta11AY.960.002075
ORF1ab/nsp12354V354LGtaTta11AY.99.20.000092
ORF1ab/nsp12354V354LGtaTta11AZ.10.000867
ORF1ab/nsp12354V354LGtaTta11B.1.1.10.000327
ORF1ab/nsp12354V354LGtaTta11B.1.1.1410.002012
ORF1ab/nsp12354V354LGtaTta11B.1.1.1700.001247
ORF1ab/nsp12354V354LGtaTta11B.1.1.2690.001353
ORF1ab/nsp12354V354LGtaTta11B.1.1.3180.000302
ORF1ab/nsp12354V354LGtaTta11B.1.1.3540.004386
ORF1ab/nsp12354V354LGtaTta11B.1.1.3590.027778
ORF1ab/nsp12354V354LGtaTta11B.1.1.370.000193
ORF1ab/nsp12354V354LGtaCta11B.1.1.390.00051
ORF1ab/nsp12354V354LGtaTta11B.1.1.4640.001473
ORF1ab/nsp12354V354LGtaTta11B.1.1110.001175
ORF1ab/nsp12354V354LGtaTta11B.1.177.190.001431
ORF1ab/nsp12354V354LGtaTta11B.1.177.440.000519
ORF1ab/nsp12354V354LGtaTta11B.1.177.670.007634
ORF1ab/nsp12354V354LGtaTta11B.1.177.720.00339
ORF1ab/nsp12354V354LGtaTta11B.1.177.80.000752
ORF1ab/nsp12354V354LGtaTta11B.1.177.870.000728
ORF1ab/nsp12354V354LGtaTta11B.1.1920.009259
ORF1ab/nsp12354V354LGtaTta11B.1.214.20.0006
ORF1ab/nsp12354V354LGtaTta11B.1.2210.000071
ORF1ab/nsp12354V354LGtaTta11B.1.2330.014085
ORF1ab/nsp12354V354LGtaTta11B.1.2430.00007
ORF1ab/nsp12354V354LGtaTta11B.1.3490.000715
ORF1ab/nsp12354V354LGtaTta11B.1.3500.002933
ORF1ab/nsp12354V354LGtaTta11B.1.36.360.000602
ORF1ab/nsp12354V354LGtaTta11B.1.3670.000792
ORF1ab/nsp12354V354LGtaTta11B.1.3710.001122
ORF1ab/nsp12354V354LGtaTta11B.1.4220.000812
ORF1ab/nsp12354V354LGtaTta11B.1.5150.014493
ORF1ab/nsp12354V354LGtaTta11B.1.5230.002451
ORF1ab/nsp12354V354LGtaTta11B.1.5490.007194
ORF1ab/nsp12354V354LGtaTta11B.1.575.10.002439
ORF1ab/nsp12354V354LGtaTta11B.1.5950.000261
ORF1ab/nsp12354V354LGtaTta11B.1.6090.000479
ORF1ab/nsp12354V354LGtaTta11B.1.6120.002653
ORF1ab/nsp12354V354LGtaTta11B.1.617.10.000129
ORF1ab/nsp12354V354LGtaTta11B.1.6210.000089
ORF1ab/nsp12354V354LGtaCta11B.1.6230.000536
ORF1ab/nsp12354V354LGtaTta11B.1.6370.000073
ORF1ab/nsp12354V354LGtaTta11B.1.9.50.005682
ORF1ab/nsp12354V354LGtaTta11B.560.028571
ORF1ab/nsp12354V354LGtaTta11B.6.60.000889
ORF1ab/nsp12354V354LGtaTta11C.370.000116
ORF1ab/nsp12354V354LGtaTta11N.90.005952
ORF1ab/nsp12354V354LGtaTta11P.30.001595
ORF1ab/nsp12354V354LGtaTta11R.10.00009