CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = V353V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12353V353VV4745VsyngtTgtC95810.85263214497-14499
ORF1ab/nsp12353V353VV4745VsyngtTgtG9590.094736814497-14499
ORF1ab/nsp12353V353VV4745VsyngtTgtA9550.052631614497-14499

Details of the mutation V353V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12353V353VgtTgtC8195All0.000015
ORF1ab/nsp12353V353VgtTgtG995All0.000002
ORF1ab/nsp12353V353VgtTgtA595All0.000001
ORF1ab/nsp12353V353VgtTgtC2427AY.40.000037
ORF1ab/nsp12353V353VgtTgtG227AY.40.000003
ORF1ab/nsp12353V353VgtTgtA127AY.40.000002
ORF1ab/nsp12353V353VgtTgtC1414G.10.583333
ORF1ab/nsp12353V353VgtTgtC1313B.1.1.70.000012
ORF1ab/nsp12353V353VgtTgtC44AY.440.000024
ORF1ab/nsp12353V353VgtTgtC24B.10.000018
ORF1ab/nsp12353V353VgtTgtG24B.10.000018
ORF1ab/nsp12353V353VgtTgtC44B.1.617.20.000015
ORF1ab/nsp12353V353VgtTgtC33AY.30.00003
ORF1ab/nsp12353V353VgtTgtC33AY.430.000013
ORF1ab/nsp12353V353VgtTgtG33B.1.36.80.003
ORF1ab/nsp12353V353VgtTgtC22AY.1030.000012
ORF1ab/nsp12353V353VgtTgtC22AY.200.000078
ORF1ab/nsp12353V353VgtTgtA11AY.1020.000027
ORF1ab/nsp12353V353VgtTgtC11AY.1110.000183
ORF1ab/nsp12353V353VgtTgtA11AY.1190.000035
ORF1ab/nsp12353V353VgtTgtC11AY.250.000006
ORF1ab/nsp12353V353VgtTgtC11AY.300.000396
ORF1ab/nsp12353V353VgtTgtC11AY.470.000031
ORF1ab/nsp12353V353VgtTgtA11AY.9.20.000037
ORF1ab/nsp12353V353VgtTgtC11B.1.10.000018
ORF1ab/nsp12353V353VgtTgtC11B.1.1.5190.00004
ORF1ab/nsp12353V353VgtTgtG11B.1.1.80.003584
ORF1ab/nsp12353V353VgtTgtC11B.1.1600.000031
ORF1ab/nsp12353V353VgtTgtA11B.1.20.000009
ORF1ab/nsp12353V353VgtTgtG11B.1.214.20.0006
ORF1ab/nsp12353V353VgtTgtC11B.1.2340.000132
ORF1ab/nsp12353V353VgtTgtC11B.1.2580.000067
ORF1ab/nsp12353V353VgtTgtC11B.1.5150.014493