CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = V353A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12353V353AV4745AnonsyngTtgCt23220.95652214497-14499
ORF1ab/nsp12353V353AV4745AnonsyngTTgCC2310.043478314497-14499

Details of the mutation V353A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12353V353AgTtgCt2223All0.000004
ORF1ab/nsp12353V353AgTTgCC123All0
ORF1ab/nsp12353V353AgTtgCt1111B.1.1.4340.003834
ORF1ab/nsp12353V353AgTtgCt33B.1.1.70.000003
ORF1ab/nsp12353V353AgTTgCC12AY.430.000004
ORF1ab/nsp12353V353AgTtgCt12AY.430.000004
ORF1ab/nsp12353V353AgTtgCt11AY.1170.000085
ORF1ab/nsp12353V353AgTtgCt11AY.40.000002
ORF1ab/nsp12353V353AgTtgCt11B.1.1.3060.000438
ORF1ab/nsp12353V353AgTtgCt11B.1.1770.000013
ORF1ab/nsp12353V353AgTtgCt11B.1.2430.00007
ORF1ab/nsp12353V353AgTtgCt11B.1.5230.002451
ORF1ab/nsp12353V353AgTtgCt11B.1.6370.000073