CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T912T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12912T912TT5304TsynacTacC114580811456940.99990116174-16176
ORF1ab/nsp12912T912TT5304TsynacTacA1145808670.00005847416174-16176
ORF1ab/nsp12912T912TT5304TsynacTacG1145808470.000041019116174-16176

Details of the mutation T912T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12912T912TacTacC11456941145808All0.219128
ORF1ab/nsp12912T912TacTacA671145808All0.000013
ORF1ab/nsp12912T912TacTacG471145808All0.000009
ORF1ab/nsp12912T912TacTacC11139501114001B.1.1.70.997234
ORF1ab/nsp12912T912TacTacA511114001B.1.1.70.000046
ORF1ab/nsp12912T912TacTacC78807880Q.10.995452
ORF1ab/nsp12912T912TacTacC68916891Q.30.99942
ORF1ab/nsp12912T912TacTacC59205920Q.80.976253
ORF1ab/nsp12912T912TacTacC31563156B.1.10.057253
ORF1ab/nsp12912T912TacTacC21982198Q.40.999545
ORF1ab/nsp12912T912TacTacC16251625Q.20.996933
ORF1ab/nsp12912T912TacTacC13911394B.10.012741
ORF1ab/nsp12912T912TacTacA21394B.10.000018
ORF1ab/nsp12912T912TacTacG11394B.10.000009
ORF1ab/nsp12912T912TacTacC900900Q.71
ORF1ab/nsp12912T912TacTacC151151Q.61
ORF1ab/nsp12912T912TacTacC114114B.1.177.730.064553
ORF1ab/nsp12912T912TacTacC9394B.1.3510.002765
ORF1ab/nsp12912T912TacTacG194B.1.3510.00003
ORF1ab/nsp12912T912TacTacC9091B.1.1770.001185
ORF1ab/nsp12912T912TacTacA191B.1.1770.000013
ORF1ab/nsp12912T912TacTacC8585B.1.5760.077063
ORF1ab/nsp12912T912TacTacC5472B.1.20.000475
ORF1ab/nsp12912T912TacTacG1372B.1.20.000114
ORF1ab/nsp12912T912TacTacA572B.1.20.000044
ORF1ab/nsp12912T912TacTacC7070B.1.2210.004972
ORF1ab/nsp12912T912TacTacC5959Q.51
ORF1ab/nsp12912T912TacTacC5353B0.006774
ORF1ab/nsp12912T912TacTacC4949B.1.1.5070.426087
ORF1ab/nsp12912T912TacTacC4949P.10.000772
ORF1ab/nsp12912T912TacTacC4747B.1.5260.001105
ORF1ab/nsp12912T912TacTacC4343B.1.1.4090.121813
ORF1ab/nsp12912T912TacTacC3540AY.40.000054
ORF1ab/nsp12912T912TacTacA540AY.40.000008
ORF1ab/nsp12912T912TacTacC3737B.1.3750.030328
ORF1ab/nsp12912T912TacTacC2333AY.430.000102
ORF1ab/nsp12912T912TacTacG933AY.430.00004
ORF1ab/nsp12912T912TacTacA133AY.430.000004
ORF1ab/nsp12912T912TacTacC3131AY.440.000189
ORF1ab/nsp12912T912TacTacC2831B.1.617.20.000105
ORF1ab/nsp12912T912TacTacG331B.1.617.20.000011
ORF1ab/nsp12912T912TacTacC2727B.1.1.3120.051625
ORF1ab/nsp12912T912TacTacC2424B.1.1.1610.084806
ORF1ab/nsp12912T912TacTacC2424B.1.5960.002091
ORF1ab/nsp12912T912TacTacC2121B.1.1.5280.100962
ORF1ab/nsp12912T912TacTacC1818B.1.1.5190.000715
ORF1ab/nsp12912T912TacTacC1818B.1.1600.000561
ORF1ab/nsp12912T912TacTacC1717B.1.6090.00815
ORF1ab/nsp12912T912TacTacC1414B.1.1.2200.026022
ORF1ab/nsp12912T912TacTacC1414P.1.10.004447
ORF1ab/nsp12912T912TacTacC1012AY.1030.000062
ORF1ab/nsp12912T912TacTacG212AY.1030.000012
ORF1ab/nsp12912T912TacTacC11110.611111
ORF1ab/nsp12912T912TacTacC1111B.1.177.70.001813
ORF1ab/nsp12912T912TacTacC1010AY.290.000158
ORF1ab/nsp12912T912TacTacC1010B.1.4290.000235
ORF1ab/nsp12912T912TacTacC1010B.1.4740.019011
ORF1ab/nsp12912T912TacTacC1010C.36.30.005672
ORF1ab/nsp12912T912TacTacC99B.1.4110.033333
ORF1ab/nsp12912T912TacTacC99B.1.6370.000658
ORF1ab/nsp12912T912TacTacC99C.370.001045
ORF1ab/nsp12912T912TacTacC99P.1.150.002091
ORF1ab/nsp12912T912TacTacC88B.1.2580.000532
ORF1ab/nsp12912T912TacTacC88B.1.6230.004292
ORF1ab/nsp12912T912TacTacC77B.1.1390.005132
ORF1ab/nsp12912T912TacTacG67B.1.5750.00182
ORF1ab/nsp12912T912TacTacC17B.1.5750.000303
ORF1ab/nsp12912T912TacTacC66AY.300.002374
ORF1ab/nsp12912T912TacTacC66AY.330.000401
ORF1ab/nsp12912T912TacTacC66AY.390.000148
ORF1ab/nsp12912T912TacTacC66AY.420.000241
ORF1ab/nsp12912T912TacTacC46AY.450.000487
ORF1ab/nsp12912T912TacTacG26AY.450.000243
ORF1ab/nsp12912T912TacTacC66B.1.1.390.003058
ORF1ab/nsp12912T912TacTacC66B.1.4270.000303
ORF1ab/nsp12912T912TacTacC66B.1.6200.005676
ORF1ab/nsp12912T912TacTacC66R.10.00054
ORF1ab/nsp12912T912TacTacC55AY.1200.000186
ORF1ab/nsp12912T912TacTacC55AY.750.00028
ORF1ab/nsp12912T912TacTacC55B.1.1.100.005574
ORF1ab/nsp12912T912TacTacC55B.1.1.700.001705
ORF1ab/nsp12912T912TacTacC55B.1.1570.014925
ORF1ab/nsp12912T912TacTacC55B.1.5640.002129
ORF1ab/nsp12912T912TacTacC55B.1.5950.001305
ORF1ab/nsp12912T912TacTacC24AY.250.000012
ORF1ab/nsp12912T912TacTacG24AY.250.000012
ORF1ab/nsp12912T912TacTacC44AY.470.000124
ORF1ab/nsp12912T912TacTacC44AY.680.001095
ORF1ab/nsp12912T912TacTacC44AY.740.000463
ORF1ab/nsp12912T912TacTacC44AY.75.10.000721
ORF1ab/nsp12912T912TacTacC44B.1.1.3180.001207
ORF1ab/nsp12912T912TacTacC44B.1.1.500.002716
ORF1ab/nsp12912T912TacTacC44B.1.1.5240.083333
ORF1ab/nsp12912T912TacTacC44B.1.177.310.045977
ORF1ab/nsp12912T912TacTacC44B.1.2060.003263
ORF1ab/nsp12912T912TacTacC44B.1.3670.00317
ORF1ab/nsp12912T912TacTacC44B.1.5800.01626
ORF1ab/nsp12912T912TacTacC44B.1.617.10.000516
ORF1ab/nsp12912T912TacTacG34B.1.6280.001057
ORF1ab/nsp12912T912TacTacC14B.1.6280.000352
ORF1ab/nsp12912T912TacTacC44P.1.120.001936
ORF1ab/nsp12912T912TacTacC33A0.001161
ORF1ab/nsp12912T912TacTacC33A.2.50.001497
ORF1ab/nsp12912T912TacTacC33AY.230.000209
ORF1ab/nsp12912T912TacTacC33AY.260.000085
ORF1ab/nsp12912T912TacTacC33AY.30.00003
ORF1ab/nsp12912T912TacTacC33AY.46.60.000217
ORF1ab/nsp12912T912TacTacC33B.1.1.2940.003797
ORF1ab/nsp12912T912TacTacC33B.1.177.410.0075
ORF1ab/nsp12912T912TacTacC33B.1.177.440.001557
ORF1ab/nsp12912T912TacTacC33B.1.2370.014925
ORF1ab/nsp12912T912TacTacC33B.1.3110.000824
ORF1ab/nsp12912T912TacTacC33B.1.360.000438
ORF1ab/nsp12912T912TacTacC33B.1.3690.000856
ORF1ab/nsp12912T912TacTacC33B.1.5250.000339
ORF1ab/nsp12912T912TacTacC33B.1.5330.028846
ORF1ab/nsp12912T912TacTacC33B.1.6250.007059
ORF1ab/nsp12912T912TacTacC33B.1.6270.006061
ORF1ab/nsp12912T912TacTacC33B.1.6330.125
ORF1ab/nsp12912T912TacTacC22AV.10.010101
ORF1ab/nsp12912T912TacTacC12AY.120.000316
ORF1ab/nsp12912T912TacTacG12AY.120.000316
ORF1ab/nsp12912T912TacTacC22AY.34.10.00102
ORF1ab/nsp12912T912TacTacC22AY.460.000208
ORF1ab/nsp12912T912TacTacC22AY.520.001629
ORF1ab/nsp12912T912TacTacC22AY.620.000871
ORF1ab/nsp12912T912TacTacC22B.1.1.10.000653
ORF1ab/nsp12912T912TacTacC22B.1.1.1410.004024
ORF1ab/nsp12912T912TacTacC22B.1.1.2690.002706
ORF1ab/nsp12912T912TacTacA12B.1.1.2770.000759
ORF1ab/nsp12912T912TacTacC12B.1.1.2770.000759
ORF1ab/nsp12912T912TacTacC22B.1.1.280.000622
ORF1ab/nsp12912T912TacTacC22B.1.1.2910.001485
ORF1ab/nsp12912T912TacTacC22B.1.1.2990.02439
ORF1ab/nsp12912T912TacTacC22B.1.1.3060.000877
ORF1ab/nsp12912T912TacTacC22B.1.1.340.026316
ORF1ab/nsp12912T912TacTacC22B.1.1.3700.025316
ORF1ab/nsp12912T912TacTacC22B.1.1.4320.002532
ORF1ab/nsp12912T912TacTacC22B.1.1.5230.003125
ORF1ab/nsp12912T912TacTacC22B.1.1.5250.010929
ORF1ab/nsp12912T912TacTacC22B.1.177.120.000303
ORF1ab/nsp12912T912TacTacG12B.1.177.210.000076
ORF1ab/nsp12912T912TacTacC12B.1.177.210.000076
ORF1ab/nsp12912T912TacTacC22B.1.177.60.001953
ORF1ab/nsp12912T912TacTacC22B.1.177.860.000367
ORF1ab/nsp12912T912TacTacC22B.1.177.90.002663
ORF1ab/nsp12912T912TacTacC22B.1.2140.007326
ORF1ab/nsp12912T912TacTacC22B.1.2340.000264
ORF1ab/nsp12912T912TacTacC22B.1.2410.001623
ORF1ab/nsp12912T912TacTacC22B.1.2430.000139
ORF1ab/nsp12912T912TacTacC22B.1.258.140.001961
ORF1ab/nsp12912T912TacTacC22B.1.258.170.000208
ORF1ab/nsp12912T912TacTacC22B.1.3800.013245
ORF1ab/nsp12912T912TacTacC22B.1.4620.014493
ORF1ab/nsp12912T912TacTacA12B.1.5240.001406
ORF1ab/nsp12912T912TacTacC12B.1.5240.001406
ORF1ab/nsp12912T912TacTacC22B.1.5300.014286
ORF1ab/nsp12912T912TacTacC22B.1.5990.007299
ORF1ab/nsp12912T912TacTacC22P.1.160.000748
ORF1ab/nsp12912T912TacTacC22P.1.170.000324
ORF1ab/nsp12912T912TacTacC22P.1.70.000639
ORF1ab/nsp12912T912TacTacC11A.2.5.10.004808
ORF1ab/nsp12912T912TacTacC11A.2.5.20.001572
ORF1ab/nsp12912T912TacTacC11A.270.001656
ORF1ab/nsp12912T912TacTacC11A.70.055556
ORF1ab/nsp12912T912TacTacC11AY.1160.000287
ORF1ab/nsp12912T912TacTacC11AY.1170.000085
ORF1ab/nsp12912T912TacTacC11AY.1190.000035
ORF1ab/nsp12912T912TacTacC11AY.130.000161
ORF1ab/nsp12912T912TacTacC11AY.160.00038
ORF1ab/nsp12912T912TacTacC11AY.20.000356
ORF1ab/nsp12912T912TacTacC11AY.200.000039
ORF1ab/nsp12912T912TacTacG11AY.3.10.000085
ORF1ab/nsp12912T912TacTacC11AY.320.000532
ORF1ab/nsp12912T912TacTacC11AY.480.000465
ORF1ab/nsp12912T912TacTacC11AY.510.000909
ORF1ab/nsp12912T912TacTacC11AY.530.000288
ORF1ab/nsp12912T912TacTacG11AY.610.000105
ORF1ab/nsp12912T912TacTacC11AY.670.000464
ORF1ab/nsp12912T912TacTacC11AY.850.000427
ORF1ab/nsp12912T912TacTacC11AY.860.00083
ORF1ab/nsp12912T912TacTacG11AY.870.000833
ORF1ab/nsp12912T912TacTacC11AY.9.20.000037
ORF1ab/nsp12912T912TacTacC11AY.920.000287
ORF1ab/nsp12912T912TacTacC11AY.950.000761
ORF1ab/nsp12912T912TacTacC11AY.980.000079
ORF1ab/nsp12912T912TacTacC11AY.98.10.000048
ORF1ab/nsp12912T912TacTacC11AZ.20.000821
ORF1ab/nsp12912T912TacTacC11B.1.1.1350.004695
ORF1ab/nsp12912T912TacTacC11B.1.1.1710.003676
ORF1ab/nsp12912T912TacTacC11B.1.1.1890.001513
ORF1ab/nsp12912T912TacTacC11B.1.1.2070.001182
ORF1ab/nsp12912T912TacTacC11B.1.1.2140.000055
ORF1ab/nsp12912T912TacTacC11B.1.1.2310.003096
ORF1ab/nsp12912T912TacTacC11B.1.1.2360.006897
ORF1ab/nsp12912T912TacTacC11B.1.1.2370.005405
ORF1ab/nsp12912T912TacTacC11B.1.1.250.000569
ORF1ab/nsp12912T912TacTacC11B.1.1.2650.003155
ORF1ab/nsp12912T912TacTacC11B.1.1.2750.011236
ORF1ab/nsp12912T912TacTacC11B.1.1.3010.001179
ORF1ab/nsp12912T912TacTacC11B.1.1.3150.008475
ORF1ab/nsp12912T912TacTacC11B.1.1.3260.001761
ORF1ab/nsp12912T912TacTacC11B.1.1.330.000421
ORF1ab/nsp12912T912TacTacC11B.1.1.3560.008547
ORF1ab/nsp12912T912TacTacC11B.1.1.3740.002375
ORF1ab/nsp12912T912TacTacC11B.1.1.3890.006061
ORF1ab/nsp12912T912TacTacC11B.1.1.4330.001425
ORF1ab/nsp12912T912TacTacC11B.1.1.440.00241
ORF1ab/nsp12912T912TacTacC11B.1.1.4400.011765
ORF1ab/nsp12912T912TacTacC11B.1.1.4620.008621
ORF1ab/nsp12912T912TacTacC11B.1.1.480.002874
ORF1ab/nsp12912T912TacTacC11B.1.1.550.012987
ORF1ab/nsp12912T912TacTacC11B.1.1.890.006061
ORF1ab/nsp12912T912TacTacC11B.1.110.30.000718
ORF1ab/nsp12912T912TacTacC11B.1.160.140.002119
ORF1ab/nsp12912T912TacTacC11B.1.160.160.000929
ORF1ab/nsp12912T912TacTacC11B.1.160.260.002421
ORF1ab/nsp12912T912TacTacC11B.1.1700.00431
ORF1ab/nsp12912T912TacTacC11B.1.177.150.000631
ORF1ab/nsp12912T912TacTacC11B.1.177.160.000664
ORF1ab/nsp12912T912TacTacC11B.1.177.240.001295
ORF1ab/nsp12912T912TacTacC11B.1.177.460.000918
ORF1ab/nsp12912T912TacTacC11B.1.177.500.004695
ORF1ab/nsp12912T912TacTacC11B.1.177.540.000606
ORF1ab/nsp12912T912TacTacC11B.1.177.560.000668
ORF1ab/nsp12912T912TacTacC11B.1.177.820.000477
ORF1ab/nsp12912T912TacTacC11B.1.1990.004132
ORF1ab/nsp12912T912TacTacC11B.1.2100.002132
ORF1ab/nsp12912T912TacTacC11B.1.214.20.0006
ORF1ab/nsp12912T912TacTacC11B.1.214.30.007143
ORF1ab/nsp12912T912TacTacC11B.1.2400.000216
ORF1ab/nsp12912T912TacTacC11B.1.3010.005917
ORF1ab/nsp12912T912TacTacC11B.1.3050.002151
ORF1ab/nsp12912T912TacTacC11B.1.351.50.0006
ORF1ab/nsp12912T912TacTacC11B.1.36.10.00114
ORF1ab/nsp12912T912TacTacC11B.1.36.100.004785
ORF1ab/nsp12912T912TacTacC11B.1.36.160.001425
ORF1ab/nsp12912T912TacTacC11B.1.3960.000706
ORF1ab/nsp12912T912TacTacC11B.1.3970.004854
ORF1ab/nsp12912T912TacTacC11B.1.3990.001934
ORF1ab/nsp12912T912TacTacC11B.1.415.10.007576
ORF1ab/nsp12912T912TacTacC11B.1.4320.011236
ORF1ab/nsp12912T912TacTacC11B.1.4330.003195
ORF1ab/nsp12912T912TacTacC11B.1.466.20.000391
ORF1ab/nsp12912T912TacTacC11B.1.5440.006024
ORF1ab/nsp12912T912TacTacC11B.1.5740.002151
ORF1ab/nsp12912T912TacTacC11B.1.5900.004545
ORF1ab/nsp12912T912TacTacC11B.1.6060.006024
ORF1ab/nsp12912T912TacTacC11B.1.6190.000871
ORF1ab/nsp12912T912TacTacC11B.1.6210.000089
ORF1ab/nsp12912T912TacTacC11B.1.6340.003425
ORF1ab/nsp12912T912TacTacC11B.1.6360.006711
ORF1ab/nsp12912T912TacTacC11B.1.780.008547
ORF1ab/nsp12912T912TacTacC11B.350.007812
ORF1ab/nsp12912T912TacTacC11B.60.00091
ORF1ab/nsp12912T912TacTacC11C.350.000774
ORF1ab/nsp12912T912TacTacC11C.380.008065
ORF1ab/nsp12912T912TacTacC11P.1.130.000898
ORF1ab/nsp12912T912TacTacC11P.30.001595