CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T85del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85del1T4477del1delAca-ca420.513693-13695
ORF1ab/nsp1285T85del1T4477del1delaCaa-a410.2513693-13695
ORF1ab/nsp1285T85del1T4477del1delacAac-410.2513693-13695

Details of the mutation T85del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85del1Aca-ca24All0
ORF1ab/nsp1285T85del1aCaa-a14All0
ORF1ab/nsp1285T85del1acAac-14All0
ORF1ab/nsp1285T85del1Aca-ca22B.1.1.70.000002
ORF1ab/nsp1285T85del1aCaa-a11AY.34.10.00051
ORF1ab/nsp1285T85del1acAac-11B.10.000009