CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T85del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85delT4477deldelACA---3535113693-13695

Details of the mutation T85del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85delACA---3535All0.000007
ORF1ab/nsp1285T85delACA---660.333333
ORF1ab/nsp1285T85delACA---55B.1.1.70.000004
ORF1ab/nsp1285T85delACA---22AY.250.000012
ORF1ab/nsp1285T85delACA---11A.23.10.000704
ORF1ab/nsp1285T85delACA---11AY.1080.001103
ORF1ab/nsp1285T85delACA---11AY.1200.000037
ORF1ab/nsp1285T85delACA---11AY.40.000002
ORF1ab/nsp1285T85delACA---11AY.430.000004
ORF1ab/nsp1285T85delACA---11AY.600.000938
ORF1ab/nsp1285T85delACA---11AY.670.000464
ORF1ab/nsp1285T85delACA---11AY.990.001049
ORF1ab/nsp1285T85delACA---11B.10.000009
ORF1ab/nsp1285T85delACA---11B.1.10.000018
ORF1ab/nsp1285T85delACA---11B.1.1.10.000327
ORF1ab/nsp1285T85delACA---11B.1.1.1390.022727
ORF1ab/nsp1285T85delACA---11B.1.1.2360.006897
ORF1ab/nsp1285T85delACA---11B.1.1.3480.000796
ORF1ab/nsp1285T85delACA---11B.1.1610.017241
ORF1ab/nsp1285T85delACA---11B.1.177.570.000281
ORF1ab/nsp1285T85delACA---11B.1.3510.00003
ORF1ab/nsp1285T85delACA---11B.1.3750.00082
ORF1ab/nsp1285T85delACA---11B.1.4150.014286
ORF1ab/nsp1285T85delACA---11B.1.617.20.000004
ORF1ab/nsp1285T85delACA---11B.1.6300.005236
ORF1ab/nsp1285T85delACA---11C.170.055556