CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T85T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85TT4477TsynacAacG111540.48648613693-13695
ORF1ab/nsp1285T85TT4477TsynacAacC111510.45945913693-13695
ORF1ab/nsp1285T85TT4477TsynacAacT11160.054054113693-13695

Details of the mutation T85T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85TacAacG54111All0.00001
ORF1ab/nsp1285T85TacAacC51111All0.00001
ORF1ab/nsp1285T85TacAacT6111All0.000001
ORF1ab/nsp1285T85TacAacC1937B.1.1.70.000017
ORF1ab/nsp1285T85TacAacG1737B.1.1.70.000015
ORF1ab/nsp1285T85TacAacT137B.1.1.70.000001
ORF1ab/nsp1285T85TacAacC79B.1.3510.000208
ORF1ab/nsp1285T85TacAacG29B.1.3510.000059
ORF1ab/nsp1285T85TacAacC68AY.430.000027
ORF1ab/nsp1285T85TacAacG28AY.430.000009
ORF1ab/nsp1285T85TacAacG57B.1.617.20.000019
ORF1ab/nsp1285T85TacAacC27B.1.617.20.000008
ORF1ab/nsp1285T85TacAacG44AY.29.10.000882
ORF1ab/nsp1285T85TacAacT34AY.40.000005
ORF1ab/nsp1285T85TacAacG14AY.40.000002
ORF1ab/nsp1285T85TacAacG33AY.1140.000693
ORF1ab/nsp1285T85TacAacC33AY.530.000863
ORF1ab/nsp1285T85TacAacG33B.1.1.2070.003546
ORF1ab/nsp1285T85TacAacG23B.1.20.000018
ORF1ab/nsp1285T85TacAacC13B.1.20.000009
ORF1ab/nsp1285T85TacAacC33B.1.3200.003736
ORF1ab/nsp1285T85TacAacG22AY.230.000139
ORF1ab/nsp1285T85TacAacG22B.1.1.280.000622
ORF1ab/nsp1285T85TacAacG12B.1.1770.000013
ORF1ab/nsp1285T85TacAacC12B.1.1770.000013
ORF1ab/nsp1285T85TacAacC11AY.1030.000006
ORF1ab/nsp1285T85TacAacG11AY.1190.000035
ORF1ab/nsp1285T85TacAacC11AY.250.000006
ORF1ab/nsp1285T85TacAacG11AY.30.00001
ORF1ab/nsp1285T85TacAacC11AY.330.000067
ORF1ab/nsp1285T85TacAacG11AY.39.10.00004
ORF1ab/nsp1285T85TacAacG11AY.440.000006
ORF1ab/nsp1285T85TacAacG11AY.460.000104
ORF1ab/nsp1285T85TacAacG11AY.470.000031
ORF1ab/nsp1285T85TacAacT11B.10.000009
ORF1ab/nsp1285T85TacAacC11B.1.10.000018
ORF1ab/nsp1285T85TacAacC11B.1.1.5190.00004
ORF1ab/nsp1285T85TacAacG11B.1.1.700.000341
ORF1ab/nsp1285T85TacAacG11B.1.2210.000071
ORF1ab/nsp1285T85TacAacG11B.1.36.170.000494
ORF1ab/nsp1285T85TacAacC11B.1.36.80.001
ORF1ab/nsp1285T85TacAacC11B.1.4290.000024
ORF1ab/nsp1285T85TacAacC11B.1.5250.000113
ORF1ab/nsp1285T85TacAacC11B.1.5260.000024
ORF1ab/nsp1285T85TacAacT11D.20.000075
ORF1ab/nsp1285T85TacAacG11Q.80.000165