CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T85I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85IT4477InonsynaCaaTa409440930.99975613693-13695
ORF1ab/nsp1285T85IT4477InonsynaCAaTC409410.0002442613693-13695

Details of the mutation T85I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85IaCaaTa40934094All0.000783
ORF1ab/nsp1285T85IaCAaTC14094All0
ORF1ab/nsp1285T85IaCaaTa970970B.1.1.4200.975855
ORF1ab/nsp1285T85IaCaaTa571571B.1.1.70.000511
ORF1ab/nsp1285T85IaCaaTa252252B.1.20.002219
ORF1ab/nsp1285T85IaCaaTa195195AY.40.000304
ORF1ab/nsp1285T85IaCaaTa166166B.1.6050.988095
ORF1ab/nsp1285T85IaCaaTa162162B.1.617.20.00061
ORF1ab/nsp1285T85IaCaaTa160160AY.270.010355
ORF1ab/nsp1285T85IaCaaTa126127B.10.001154
ORF1ab/nsp1285T85IaCAaTC1127B.10.000009
ORF1ab/nsp1285T85IaCaaTa113113AY.30.001124
ORF1ab/nsp1285T85IaCaaTa113113B.1.10.00205
ORF1ab/nsp1285T85IaCaaTa105105P.10.001654
ORF1ab/nsp1285T85IaCaaTa102102B.1.1770.001343
ORF1ab/nsp1285T85IaCaaTa9797AY.440.00059
ORF1ab/nsp1285T85IaCaaTa7979AY.1180.004949
ORF1ab/nsp1285T85IaCaaTa6767AY.250.000403
ORF1ab/nsp1285T85IaCaaTa6262B.1.1600.001934
ORF1ab/nsp1285T85IaCaaTa6060AY.430.000266
ORF1ab/nsp1285T85IaCaaTa3535AY.1030.000217
ORF1ab/nsp1285T85IaCaaTa2929B.1.2580.00193
ORF1ab/nsp1285T85IaCaaTa2525B.1.5960.002178
ORF1ab/nsp1285T85IaCaaTa2323B.1.5030.057214
ORF1ab/nsp1285T85IaCaaTa2222B.1.1.2420.956522
ORF1ab/nsp1285T85IaCaaTa2121AY.360.003112
ORF1ab/nsp1285T85IaCaaTa1717AY.330.001135
ORF1ab/nsp1285T85IaCaaTa1414B.1.3510.000416
ORF1ab/nsp1285T85IaCaaTa1313B.1.1.5190.000516
ORF1ab/nsp1285T85IaCaaTa1212AY.1000.000552
ORF1ab/nsp1285T85IaCaaTa1212AY.290.000189
ORF1ab/nsp1285T85IaCaaTa1212B.1.5260.000282
ORF1ab/nsp1285T85IaCaaTa1212U.30.046332
ORF1ab/nsp1285T85IaCaaTa1111AY.470.000342
ORF1ab/nsp1285T85IaCaaTa1111AY.610.001153
ORF1ab/nsp1285T85IaCaaTa1111AY.99.20.001014
ORF1ab/nsp1285T85IaCaaTa1010AY.1020.000265
ORF1ab/nsp1285T85IaCaaTa1010B.1.6210.000885
ORF1ab/nsp1285T85IaCaaTa99AY.260.000255
ORF1ab/nsp1285T85IaCaaTa99AY.460.000937
ORF1ab/nsp1285T85IaCaaTa99AY.480.004186
ORF1ab/nsp1285T85IaCaaTa99AY.50.000186
ORF1ab/nsp1285T85IaCaaTa88AY.390.000198
ORF1ab/nsp1285T85IaCaaTa88AY.4.20.000174
ORF1ab/nsp1285T85IaCaaTa88B.1.1.10.002614
ORF1ab/nsp1285T85IaCaaTa88B.1.1.170.133333
ORF1ab/nsp1285T85IaCaaTa77AY.1070.003262
ORF1ab/nsp1285T85IaCaaTa77AY.200.000272
ORF1ab/nsp1285T85IaCaaTa77B0.000895
ORF1ab/nsp1285T85IaCaaTa77B.1.36.290.003621
ORF1ab/nsp1285T85IaCaaTa77B.1.6270.014141
ORF1ab/nsp1285T85IaCaaTa66AY.740.000694
ORF1ab/nsp1285T85IaCaaTa66B.1.2340.000792
ORF1ab/nsp1285T85IaCaaTa66B.1.4110.022222
ORF1ab/nsp1285T85IaCaaTa66P.1.140.000287
ORF1ab/nsp1285T85IaCaaTa66R.10.00054
ORF1ab/nsp1285T85IaCaaTa55A0.001935
ORF1ab/nsp1285T85IaCaaTa55AY.450.000608
ORF1ab/nsp1285T85IaCaaTa55B.1.1.2070.00591
ORF1ab/nsp1285T85IaCaaTa55B.1.1.330.002104
ORF1ab/nsp1285T85IaCaaTa55B.1.4290.000118
ORF1ab/nsp1285T85IaCaaTa55B.1.4700.007022
ORF1ab/nsp1285T85IaCaaTa44AY.1010.001962
ORF1ab/nsp1285T85IaCaaTa44AY.1040.007937
ORF1ab/nsp1285T85IaCaaTa44AY.3.10.000341
ORF1ab/nsp1285T85IaCaaTa44AY.98.10.000194
ORF1ab/nsp1285T85IaCaaTa44B.1.1.3360.066667
ORF1ab/nsp1285T85IaCaaTa44P.1.100.001078
ORF1ab/nsp1285T85IaCaaTa44Q.10.000505
ORF1ab/nsp1285T85IaCaaTa33A.270.004967
ORF1ab/nsp1285T85IaCaaTa33AY.1160.00086
ORF1ab/nsp1285T85IaCaaTa33AY.1170.000254
ORF1ab/nsp1285T85IaCaaTa33AY.1190.000106
ORF1ab/nsp1285T85IaCaaTa33AY.130.000483
ORF1ab/nsp1285T85IaCaaTa33AY.420.000121
ORF1ab/nsp1285T85IaCaaTa33AY.46.40.000494
ORF1ab/nsp1285T85IaCaaTa33AY.540.000286
ORF1ab/nsp1285T85IaCaaTa33AY.680.000821
ORF1ab/nsp1285T85IaCaaTa33AY.9.20.00011
ORF1ab/nsp1285T85IaCaaTa33AY.990.003148
ORF1ab/nsp1285T85IaCaaTa33B.1.1.630.001157
ORF1ab/nsp1285T85IaCaaTa33B.1.2210.000213
ORF1ab/nsp1285T85IaCaaTa33B.1.360.000438
ORF1ab/nsp1285T85IaCaaTa33B.1.36.180.001261
ORF1ab/nsp1285T85IaCaaTa33B.1.36.370.008333
ORF1ab/nsp1285T85IaCaaTa33B.1.4220.002437
ORF1ab/nsp1285T85IaCaaTa33B.1.617.10.000387
ORF1ab/nsp1285T85IaCaaTa33B.1.9.40.018405
ORF1ab/nsp1285T85IaCaaTa33P.1.120.001452
ORF1ab/nsp1285T85IaCaaTa22A.20.001324
ORF1ab/nsp1285T85IaCaaTa22AT.10.010256
ORF1ab/nsp1285T85IaCaaTa22AY.10.000791
ORF1ab/nsp1285T85IaCaaTa22AY.140.000176
ORF1ab/nsp1285T85IaCaaTa22AY.160.000759
ORF1ab/nsp1285T85IaCaaTa22AY.4.2.10.000298
ORF1ab/nsp1285T85IaCaaTa22AY.46.60.000144
ORF1ab/nsp1285T85IaCaaTa22AY.750.000112
ORF1ab/nsp1285T85IaCaaTa22AY.75.10.000361
ORF1ab/nsp1285T85IaCaaTa22AY.940.000885
ORF1ab/nsp1285T85IaCaaTa22AY.980.000158
ORF1ab/nsp1285T85IaCaaTa22AZ.30.00304
ORF1ab/nsp1285T85IaCaaTa22B.1.1.2220.000408
ORF1ab/nsp1285T85IaCaaTa22B.1.1.250.001137
ORF1ab/nsp1285T85IaCaaTa22B.1.1.2790.002242
ORF1ab/nsp1285T85IaCaaTa22B.1.1.2980.001724
ORF1ab/nsp1285T85IaCaaTa22B.1.1.3110.000716
ORF1ab/nsp1285T85IaCaaTa22B.1.1.370.000386
ORF1ab/nsp1285T85IaCaaTa22B.1.1.390.001019
ORF1ab/nsp1285T85IaCaaTa22B.1.1.830.00542
ORF1ab/nsp1285T85IaCaaTa22B.1.177.530.004785
ORF1ab/nsp1285T85IaCaaTa22B.1.5650.001621
ORF1ab/nsp1285T85IaCaaTa22B.1.6090.000959
ORF1ab/nsp1285T85IaCaaTa22B.1.6190.001742
ORF1ab/nsp1285T85IaCaaTa22B.1.6370.000146
ORF1ab/nsp1285T85IaCaaTa22C.370.000232
ORF1ab/nsp1285T85IaCaaTa22Q.80.00033
ORF1ab/nsp1285T85IaCaaTa11A.2.5.10.004808
ORF1ab/nsp1285T85IaCaaTa11A.23.10.000704
ORF1ab/nsp1285T85IaCaaTa11AY.1050.000643
ORF1ab/nsp1285T85IaCaaTa11AY.1080.001103
ORF1ab/nsp1285T85IaCaaTa11AY.1090.00074
ORF1ab/nsp1285T85IaCaaTa11AY.1130.000142
ORF1ab/nsp1285T85IaCaaTa11AY.116.10.000311
ORF1ab/nsp1285T85IaCaaTa11AY.1200.000037
ORF1ab/nsp1285T85IaCaaTa11AY.1210.000135
ORF1ab/nsp1285T85IaCaaTa11AY.16.10.00047
ORF1ab/nsp1285T85IaCaaTa11AY.230.00007
ORF1ab/nsp1285T85IaCaaTa11AY.300.000396
ORF1ab/nsp1285T85IaCaaTa11AY.39.10.00004
ORF1ab/nsp1285T85IaCaaTa11AY.4.50.000107
ORF1ab/nsp1285T85IaCaaTa11AY.520.000814
ORF1ab/nsp1285T85IaCaaTa11AY.530.000288
ORF1ab/nsp1285T85IaCaaTa11AY.550.000917
ORF1ab/nsp1285T85IaCaaTa11AY.620.000436
ORF1ab/nsp1285T85IaCaaTa11AY.790.001211
ORF1ab/nsp1285T85IaCaaTa11AY.9.10.000084
ORF1ab/nsp1285T85IaCaaTa11AY.900.000684
ORF1ab/nsp1285T85IaCaaTa11AZ.10.000867
ORF1ab/nsp1285T85IaCaaTa11B.1.1.1740.003378
ORF1ab/nsp1285T85IaCaaTa11B.1.1.2000.007463
ORF1ab/nsp1285T85IaCaaTa11B.1.1.2540.011236
ORF1ab/nsp1285T85IaCaaTa11B.1.1.2940.001266
ORF1ab/nsp1285T85IaCaaTa11B.1.1.2970.002237
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3010.001179
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3060.000438
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3070.002532
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3480.000796
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3690.000446
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3740.002375
ORF1ab/nsp1285T85IaCaaTa11B.1.1.3970.002252
ORF1ab/nsp1285T85IaCaaTa11B.1.1.4090.002833
ORF1ab/nsp1285T85IaCaaTa11B.1.1.4160.000905
ORF1ab/nsp1285T85IaCaaTa11B.1.1.4170.002703
ORF1ab/nsp1285T85IaCaaTa11B.1.1.560.017857
ORF1ab/nsp1285T85IaCaaTa11B.1.1.610.008772
ORF1ab/nsp1285T85IaCaaTa11B.1.1.700.000341
ORF1ab/nsp1285T85IaCaaTa11B.1.110.30.000718
ORF1ab/nsp1285T85IaCaaTa11B.1.1110.001175
ORF1ab/nsp1285T85IaCaaTa11B.1.1180.006711
ORF1ab/nsp1285T85IaCaaTa11B.1.160.280.002924
ORF1ab/nsp1285T85IaCaaTa11B.1.177.170.000821
ORF1ab/nsp1285T85IaCaaTa11B.1.177.560.000668
ORF1ab/nsp1285T85IaCaaTa11B.1.177.580.001332
ORF1ab/nsp1285T85IaCaaTa11B.1.177.630.002703
ORF1ab/nsp1285T85IaCaaTa11B.1.177.730.000566
ORF1ab/nsp1285T85IaCaaTa11B.1.177.80.000752
ORF1ab/nsp1285T85IaCaaTa11B.1.177.810.000189
ORF1ab/nsp1285T85IaCaaTa11B.1.2060.000816
ORF1ab/nsp1285T85IaCaaTa11B.1.2320.000537
ORF1ab/nsp1285T85IaCaaTa11B.1.2430.00007
ORF1ab/nsp1285T85IaCaaTa11B.1.258.110.000396
ORF1ab/nsp1285T85IaCaaTa11B.1.258.220.002667
ORF1ab/nsp1285T85IaCaaTa11B.1.2980.002114
ORF1ab/nsp1285T85IaCaaTa11B.1.351.20.000303
ORF1ab/nsp1285T85IaCaaTa11B.1.3560.001727
ORF1ab/nsp1285T85IaCaaTa11B.1.3590.022727
ORF1ab/nsp1285T85IaCaaTa11B.1.36.360.000602
ORF1ab/nsp1285T85IaCaaTa11B.1.36.380.001642
ORF1ab/nsp1285T85IaCaaTa11B.1.3610.001289
ORF1ab/nsp1285T85IaCaaTa11B.1.3690.000285
ORF1ab/nsp1285T85IaCaaTa11B.1.4080.00369
ORF1ab/nsp1285T85IaCaaTa11B.1.4090.000781
ORF1ab/nsp1285T85IaCaaTa11B.1.4270.00005
ORF1ab/nsp1285T85IaCaaTa11B.1.428.30.012821
ORF1ab/nsp1285T85IaCaaTa11B.1.4340.052632
ORF1ab/nsp1285T85IaCaaTa11B.1.4350.011364
ORF1ab/nsp1285T85IaCaaTa11B.1.466.20.000391
ORF1ab/nsp1285T85IaCaaTa11B.1.4740.001901
ORF1ab/nsp1285T85IaCaaTa11B.1.5440.006024
ORF1ab/nsp1285T85IaCaaTa11B.1.5600.00463
ORF1ab/nsp1285T85IaCaaTa11B.1.5610.000397
ORF1ab/nsp1285T85IaCaaTa11B.1.5640.000426
ORF1ab/nsp1285T85IaCaaTa11B.1.5880.00091
ORF1ab/nsp1285T85IaCaaTa11B.1.5990.00365
ORF1ab/nsp1285T85IaCaaTa11B.1.6020.006536
ORF1ab/nsp1285T85IaCaaTa11B.1.621.10.000506
ORF1ab/nsp1285T85IaCaaTa11B.1.6230.000536
ORF1ab/nsp1285T85IaCaaTa11B.6.60.000889
ORF1ab/nsp1285T85IaCaaTa11C.140.004329
ORF1ab/nsp1285T85IaCaaTa11P.1.10.000318
ORF1ab/nsp1285T85IaCaaTa11P.1.160.000374
ORF1ab/nsp1285T85IaCaaTa11P.1.170.000162
ORF1ab/nsp1285T85IaCaaTa11P.20.000187
ORF1ab/nsp1285T85IaCaaTa11P.70.004367