CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T85A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1285T85AT4477AnonsynAcaGca301301113693-13695

Details of the mutation T85A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1285T85AAcaGca301301All0.000058
ORF1ab/nsp1285T85AAcaGca6565B.1.617.20.000245
ORF1ab/nsp1285T85AAcaGca6161B.1.1.70.000055
ORF1ab/nsp1285T85AAcaGca4242B.1.1.3180.012674
ORF1ab/nsp1285T85AAcaGca2626AY.430.000115
ORF1ab/nsp1285T85AAcaGca2222AY.790.026634
ORF1ab/nsp1285T85AAcaGca2020B.1.1770.000263
ORF1ab/nsp1285T85AAcaGca66AY.390.000148
ORF1ab/nsp1285T85AAcaGca66B.1.1.2140.000333
ORF1ab/nsp1285T85AAcaGca44AY.1020.000106
ORF1ab/nsp1285T85AAcaGca44AY.1130.00057
ORF1ab/nsp1285T85AAcaGca44AY.440.000024
ORF1ab/nsp1285T85AAcaGca33AY.250.000018
ORF1ab/nsp1285T85AAcaGca33B.1.3510.000089
ORF1ab/nsp1285T85AAcaGca22AY.1100.000225
ORF1ab/nsp1285T85AAcaGca22AY.120.000632
ORF1ab/nsp1285T85AAcaGca22AY.29.10.000441
ORF1ab/nsp1285T85AAcaGca22B.10.000018
ORF1ab/nsp1285T85AAcaGca22B.1.177.630.005405
ORF1ab/nsp1285T85AAcaGca22B.1.2430.000139
ORF1ab/nsp1285T85AAcaGca22C.370.000232
ORF1ab/nsp1285T85AAcaGca11A.10.000282
ORF1ab/nsp1285T85AAcaGca11AY.1030.000006
ORF1ab/nsp1285T85AAcaGca11AY.1060.000335
ORF1ab/nsp1285T85AAcaGca11AY.140.000088
ORF1ab/nsp1285T85AAcaGca11AY.40.000002
ORF1ab/nsp1285T85AAcaGca11AY.4.20.000022
ORF1ab/nsp1285T85AAcaGca11AY.4.2.10.000149
ORF1ab/nsp1285T85AAcaGca11AY.450.000122
ORF1ab/nsp1285T85AAcaGca11AY.470.000031
ORF1ab/nsp1285T85AAcaGca11AY.640.000595
ORF1ab/nsp1285T85AAcaGca11AY.710.000475
ORF1ab/nsp1285T85AAcaGca11B.1.1.5190.00004
ORF1ab/nsp1285T85AAcaGca11B.1.1.890.006061
ORF1ab/nsp1285T85AAcaGca11B.1.177.20.004545
ORF1ab/nsp1285T85AAcaGca11B.1.214.20.0006
ORF1ab/nsp1285T85AAcaGca11B.1.2210.000071
ORF1ab/nsp1285T85AAcaGca11B.1.3990.001934
ORF1ab/nsp1285T85AAcaGca11B.1.4090.000781
ORF1ab/nsp1285T85AAcaGca11B.1.5260.000024
ORF1ab/nsp1285T85AAcaGca11B.1.6210.000089
ORF1ab/nsp1285T85AAcaGca11B.400.000364