CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T701L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12701T701LT5093LnonsynACgTTg1250.41666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGTTA1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACgCTg1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGCTT1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGCTA1210.083333315541-15543

Details of the mutation T701L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12701T701LACgTTg512All0.000001
ORF1ab/nsp12701T701LACGTTA212All0
ORF1ab/nsp12701T701LACgCTg212All0
ORF1ab/nsp12701T701LACGCTT212All0
ORF1ab/nsp12701T701LACGCTA112All0
ORF1ab/nsp12701T701LACgTTg25B.10.000018
ORF1ab/nsp12701T701LACGCTT15B.10.000009
ORF1ab/nsp12701T701LACgCTg15B.10.000009
ORF1ab/nsp12701T701LACGTTA15B.10.000009
ORF1ab/nsp12701T701LACGTTA15B.1.10.000018
ORF1ab/nsp12701T701LACgTTg15B.1.10.000018
ORF1ab/nsp12701T701LACgCTg15B.1.10.000018
ORF1ab/nsp12701T701LACGCTT15B.1.10.000018
ORF1ab/nsp12701T701LACGCTA15B.1.10.000018
ORF1ab/nsp12701T701LACgTTg11B.1.1.2050.003717
ORF1ab/nsp12701T701LACgTTg11B.1.6270.00202