CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T319I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12319T319IT4711InonsynaCaaTa28872887114395-14397

Details of the mutation T319I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12319T319IaCaaTa28872887All0.000552
ORF1ab/nsp12319T319IaCaaTa551551B.1.1.70.000493
ORF1ab/nsp12319T319IaCaaTa315315B.1.617.20.001186
ORF1ab/nsp12319T319IaCaaTa217217AY.40.000338
ORF1ab/nsp12319T319IaCaaTa182182AY.340.017648
ORF1ab/nsp12319T319IaCaaTa177177AY.260.005011
ORF1ab/nsp12319T319IaCaaTa177177B.1.6370.012934
ORF1ab/nsp12319T319IaCaaTa9696AY.440.000584
ORF1ab/nsp12319T319IaCaaTa8686AY.250.000517
ORF1ab/nsp12319T319IaCaaTa7272AY.1030.000447
ORF1ab/nsp12319T319IaCaaTa6565AY.30.000647
ORF1ab/nsp12319T319IaCaaTa6161AY.430.00027
ORF1ab/nsp12319T319IaCaaTa5959AY.4.20.00128
ORF1ab/nsp12319T319IaCaaTa5757C.370.006616
ORF1ab/nsp12319T319IaCaaTa5151B.1.20.000449
ORF1ab/nsp12319T319IaCaaTa4444B.10.000403
ORF1ab/nsp12319T319IaCaaTa3232P.10.000504
ORF1ab/nsp12319T319IaCaaTa3030AY.230.002092
ORF1ab/nsp12319T319IaCaaTa2929B.1.1.401
ORF1ab/nsp12319T319IaCaaTa2020B.1.1.3060.008768
ORF1ab/nsp12319T319IaCaaTa1919AY.750.001064
ORF1ab/nsp12319T319IaCaaTa1919B.1.5960.001656
ORF1ab/nsp12319T319IaCaaTa1818B.1.4290.000424
ORF1ab/nsp12319T319IaCaaTa1717B.1.10.000308
ORF1ab/nsp12319T319IaCaaTa1616B.1.177.860.002935
ORF1ab/nsp12319T319IaCaaTa1616B.1.5750.004854
ORF1ab/nsp12319T319IaCaaTa1414B.1.5260.000329
ORF1ab/nsp12319T319IaCaaTa1212AY.1020.000318
ORF1ab/nsp12319T319IaCaaTa1212AY.270.000777
ORF1ab/nsp12319T319IaCaaTa1212AY.400.011572
ORF1ab/nsp12319T319IaCaaTa1212B.1.1.5190.000477
ORF1ab/nsp12319T319IaCaaTa1212B.1.1770.000158
ORF1ab/nsp12319T319IaCaaTa1212B.1.5170.005124
ORF1ab/nsp12319T319IaCaaTa1111AY.290.000174
ORF1ab/nsp12319T319IaCaaTa1111AY.50.000227
ORF1ab/nsp12319T319IaCaaTa1111B.1.2400.002371
ORF1ab/nsp12319T319IaCaaTa1010AY.1190.000353
ORF1ab/nsp12319T319IaCaaTa1010B.1.2510.217391
ORF1ab/nsp12319T319IaCaaTa99AY.470.00028
ORF1ab/nsp12319T319IaCaaTa99B.1.1.3180.002716
ORF1ab/nsp12319T319IaCaaTa99B.1.1600.000281
ORF1ab/nsp12319T319IaCaaTa99B.1.3510.000268
ORF1ab/nsp12319T319IaCaaTa99D.20.000675
ORF1ab/nsp12319T319IaCaaTa88AY.850.003417
ORF1ab/nsp12319T319IaCaaTa88B.1.1.330.003367
ORF1ab/nsp12319T319IaCaaTa77AY.1130.000997
ORF1ab/nsp12319T319IaCaaTa66AY.200.000233
ORF1ab/nsp12319T319IaCaaTa66AY.75.10.001082
ORF1ab/nsp12319T319IaCaaTa66B.1.177.730.003398
ORF1ab/nsp12319T319IaCaaTa55AY.39.10.000198
ORF1ab/nsp12319T319IaCaaTa55AY.460.00052
ORF1ab/nsp12319T319IaCaaTa55AY.46.40.000823
ORF1ab/nsp12319T319IaCaaTa55AY.980.000395
ORF1ab/nsp12319T319IaCaaTa55P.1.130.004492
ORF1ab/nsp12319T319IaCaaTa55P.1.150.001162
ORF1ab/nsp12319T319IaCaaTa44AY.1070.001864
ORF1ab/nsp12319T319IaCaaTa44AY.1200.000149
ORF1ab/nsp12319T319IaCaaTa44AY.640.002381
ORF1ab/nsp12319T319IaCaaTa44B.1.1.2140.000222
ORF1ab/nsp12319T319IaCaaTa44B.1.1.2630.006231
ORF1ab/nsp12319T319IaCaaTa44B.1.2210.000284
ORF1ab/nsp12319T319IaCaaTa44B.1.2580.000266
ORF1ab/nsp12319T319IaCaaTa44P.1.100.001078
ORF1ab/nsp12319T319IaCaaTa33A.23.10.002113
ORF1ab/nsp12319T319IaCaaTa33AY.1040.005952
ORF1ab/nsp12319T319IaCaaTa33AY.1170.000254
ORF1ab/nsp12319T319IaCaaTa33AY.1210.000406
ORF1ab/nsp12319T319IaCaaTa33AY.390.000074
ORF1ab/nsp12319T319IaCaaTa33AY.420.000121
ORF1ab/nsp12319T319IaCaaTa33AY.46.20.001906
ORF1ab/nsp12319T319IaCaaTa33AY.540.000286
ORF1ab/nsp12319T319IaCaaTa33AY.60.000123
ORF1ab/nsp12319T319IaCaaTa33AY.610.000314
ORF1ab/nsp12319T319IaCaaTa33AY.670.001393
ORF1ab/nsp12319T319IaCaaTa33AY.99.20.000276
ORF1ab/nsp12319T319IaCaaTa33B.1.1.250.001706
ORF1ab/nsp12319T319IaCaaTa33B.1.1.2840.000322
ORF1ab/nsp12319T319IaCaaTa33B.1.4270.000151
ORF1ab/nsp12319T319IaCaaTa220.111111
ORF1ab/nsp12319T319IaCaaTa22A0.000774
ORF1ab/nsp12319T319IaCaaTa22AY.1000.000092
ORF1ab/nsp12319T319IaCaaTa22AY.1050.001286
ORF1ab/nsp12319T319IaCaaTa22AY.1140.000462
ORF1ab/nsp12319T319IaCaaTa22AY.1180.000125
ORF1ab/nsp12319T319IaCaaTa22AY.120.10.000642
ORF1ab/nsp12319T319IaCaaTa22AY.46.60.000144
ORF1ab/nsp12319T319IaCaaTa22AY.490.00639
ORF1ab/nsp12319T319IaCaaTa22AY.560.00321
ORF1ab/nsp12319T319IaCaaTa22AY.590.001059
ORF1ab/nsp12319T319IaCaaTa22AY.650.001066
ORF1ab/nsp12319T319IaCaaTa22AY.7.10.000225
ORF1ab/nsp12319T319IaCaaTa22AY.9.20.000073
ORF1ab/nsp12319T319IaCaaTa22AY.930.000546
ORF1ab/nsp12319T319IaCaaTa22B.1.1.4340.000697
ORF1ab/nsp12319T319IaCaaTa22B.1.1.520.02439
ORF1ab/nsp12319T319IaCaaTa22B.1.1.630.000772
ORF1ab/nsp12319T319IaCaaTa22B.1.110.30.001437
ORF1ab/nsp12319T319IaCaaTa22B.1.177.70.00033
ORF1ab/nsp12319T319IaCaaTa22B.1.2340.000264
ORF1ab/nsp12319T319IaCaaTa22B.1.360.000292
ORF1ab/nsp12319T319IaCaaTa22B.1.36.220.002415
ORF1ab/nsp12319T319IaCaaTa22B.1.4280.002041
ORF1ab/nsp12319T319IaCaaTa22B.1.5380.016129
ORF1ab/nsp12319T319IaCaaTa22B.1.5890.015152
ORF1ab/nsp12319T319IaCaaTa22U.20.017544
ORF1ab/nsp12319T319IaCaaTa11AY.10.000396
ORF1ab/nsp12319T319IaCaaTa11AY.1010.00049
ORF1ab/nsp12319T319IaCaaTa11AY.1060.000335
ORF1ab/nsp12319T319IaCaaTa11AY.1100.000113
ORF1ab/nsp12319T319IaCaaTa11AY.1110.000183
ORF1ab/nsp12319T319IaCaaTa11AY.1160.000287
ORF1ab/nsp12319T319IaCaaTa11AY.160.00038
ORF1ab/nsp12319T319IaCaaTa11AY.16.10.00047
ORF1ab/nsp12319T319IaCaaTa11AY.190.00114
ORF1ab/nsp12319T319IaCaaTa11AY.300.000396
ORF1ab/nsp12319T319IaCaaTa11AY.330.000067
ORF1ab/nsp12319T319IaCaaTa11AY.34.10.00051
ORF1ab/nsp12319T319IaCaaTa11AY.380.000499
ORF1ab/nsp12319T319IaCaaTa11AY.4.30.000842
ORF1ab/nsp12319T319IaCaaTa11AY.5.30.000337
ORF1ab/nsp12319T319IaCaaTa11AY.530.000288
ORF1ab/nsp12319T319IaCaaTa11AY.620.000436
ORF1ab/nsp12319T319IaCaaTa11AY.70.000196
ORF1ab/nsp12319T319IaCaaTa11AY.710.000475
ORF1ab/nsp12319T319IaCaaTa11AY.740.000116
ORF1ab/nsp12319T319IaCaaTa11AY.80.000606
ORF1ab/nsp12319T319IaCaaTa11AY.90.000068
ORF1ab/nsp12319T319IaCaaTa11AY.950.000761
ORF1ab/nsp12319T319IaCaaTa11B.1.1.10.000327
ORF1ab/nsp12319T319IaCaaTa11B.1.1.1010.01
ORF1ab/nsp12319T319IaCaaTa11B.1.1.1450.037037
ORF1ab/nsp12319T319IaCaaTa11B.1.1.2070.001182
ORF1ab/nsp12319T319IaCaaTa11B.1.1.2240.014286
ORF1ab/nsp12319T319IaCaaTa11B.1.1.2430.004082
ORF1ab/nsp12319T319IaCaaTa11B.1.1.2660.012195
ORF1ab/nsp12319T319IaCaaTa11B.1.1.280.000311
ORF1ab/nsp12319T319IaCaaTa11B.1.1.3440.010753
ORF1ab/nsp12319T319IaCaaTa11B.1.1.3740.002375
ORF1ab/nsp12319T319IaCaaTa11B.1.1.3970.002252
ORF1ab/nsp12319T319IaCaaTa11B.1.1.4480.002033
ORF1ab/nsp12319T319IaCaaTa11B.1.1.4640.001473
ORF1ab/nsp12319T319IaCaaTa11B.1.1.50.008333
ORF1ab/nsp12319T319IaCaaTa11B.1.1.5170.006803
ORF1ab/nsp12319T319IaCaaTa11B.1.1280.000635
ORF1ab/nsp12319T319IaCaaTa11B.1.1470.000756
ORF1ab/nsp12319T319IaCaaTa11B.1.160.280.002924
ORF1ab/nsp12319T319IaCaaTa11B.1.177.210.000076
ORF1ab/nsp12319T319IaCaaTa11B.1.177.440.000519
ORF1ab/nsp12319T319IaCaaTa11B.1.177.560.000668
ORF1ab/nsp12319T319IaCaaTa11B.1.177.600.000218
ORF1ab/nsp12319T319IaCaaTa11B.1.177.720.00339
ORF1ab/nsp12319T319IaCaaTa11B.1.177.810.000189
ORF1ab/nsp12319T319IaCaaTa11B.1.2180.005155
ORF1ab/nsp12319T319IaCaaTa11B.1.2370.004975
ORF1ab/nsp12319T319IaCaaTa11B.1.2430.00007
ORF1ab/nsp12319T319IaCaaTa11B.1.258.140.00098
ORF1ab/nsp12319T319IaCaaTa11B.1.258.30.001675
ORF1ab/nsp12319T319IaCaaTa11B.1.2600.003344
ORF1ab/nsp12319T319IaCaaTa11B.1.36.10.00114
ORF1ab/nsp12319T319IaCaaTa11B.1.36.290.000517
ORF1ab/nsp12319T319IaCaaTa11B.1.3850.010638
ORF1ab/nsp12319T319IaCaaTa11B.1.4000.000429
ORF1ab/nsp12319T319IaCaaTa11B.1.4620.007246
ORF1ab/nsp12319T319IaCaaTa11B.1.466.20.000391
ORF1ab/nsp12319T319IaCaaTa11B.1.5610.000397
ORF1ab/nsp12319T319IaCaaTa11B.1.5950.000261
ORF1ab/nsp12319T319IaCaaTa11B.1.5990.00365
ORF1ab/nsp12319T319IaCaaTa11B.1.617.10.000129
ORF1ab/nsp12319T319IaCaaTa11B.1.6210.000089
ORF1ab/nsp12319T319IaCaaTa11B.1.6360.006711
ORF1ab/nsp12319T319IaCaaTa11B.450.003831
ORF1ab/nsp12319T319IaCaaTa11B.520.010101
ORF1ab/nsp12319T319IaCaaTa11C.36.30.000567
ORF1ab/nsp12319T319IaCaaTa11C.40.01
ORF1ab/nsp12319T319IaCaaTa11P.1.140.000048
ORF1ab/nsp12319T319IaCaaTa11Q.10.000126
ORF1ab/nsp12319T319IaCaaTa11Q.30.000145
ORF1ab/nsp12319T319IaCaaTa11Q.80.000165
ORF1ab/nsp12319T319IaCaaTa11R.10.00009
ORF1ab/nsp12319T319IaCaaTa11W.40.001351