CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T293T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12293T293TT4685TsynacAacG3663380.92349714317-14319
ORF1ab/nsp12293T293TT4685TsynacAacT366140.038251414317-14319
ORF1ab/nsp12293T293TT4685TsynacAacC366140.038251414317-14319

Details of the mutation T293T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12293T293TacAacG338366All0.000065
ORF1ab/nsp12293T293TacAacT14366All0.000003
ORF1ab/nsp12293T293TacAacC14366All0.000003
ORF1ab/nsp12293T293TacAacG8282B.1.258.140.080392
ORF1ab/nsp12293T293TacAacG5858P.1.140.002772
ORF1ab/nsp12293T293TacAacG5151P.20.009518
ORF1ab/nsp12293T293TacAacG2425AY.40.000037
ORF1ab/nsp12293T293TacAacC125AY.40.000002
ORF1ab/nsp12293T293TacAacG1718B.1.1.70.000015
ORF1ab/nsp12293T293TacAacC118B.1.1.70.000001
ORF1ab/nsp12293T293TacAacG1313AY.30.000129
ORF1ab/nsp12293T293TacAacG1213B.1.617.20.000045
ORF1ab/nsp12293T293TacAacC113B.1.617.20.000004
ORF1ab/nsp12293T293TacAacG1112AY.250.000066
ORF1ab/nsp12293T293TacAacT112AY.250.000006
ORF1ab/nsp12293T293TacAacG66AY.1190.000212
ORF1ab/nsp12293T293TacAacG36B.10.000027
ORF1ab/nsp12293T293TacAacT36B.10.000027
ORF1ab/nsp12293T293TacAacT46B.1.20.000035
ORF1ab/nsp12293T293TacAacC16B.1.20.000009
ORF1ab/nsp12293T293TacAacG16B.1.20.000009
ORF1ab/nsp12293T293TacAacG55AY.1000.00023
ORF1ab/nsp12293T293TacAacG55AY.90.000338
ORF1ab/nsp12293T293TacAacG24AY.1030.000012
ORF1ab/nsp12293T293TacAacC24AY.1030.000012
ORF1ab/nsp12293T293TacAacG34AY.430.000013
ORF1ab/nsp12293T293TacAacC14AY.430.000004
ORF1ab/nsp12293T293TacAacG34AY.440.000018
ORF1ab/nsp12293T293TacAacC14AY.440.000006
ORF1ab/nsp12293T293TacAacG44B.1.2580.000266
ORF1ab/nsp12293T293TacAacC44B.1.3510.000119
ORF1ab/nsp12293T293TacAacG33AY.390.000074
ORF1ab/nsp12293T293TacAacG33AY.950.002283
ORF1ab/nsp12293T293TacAacG33B.1.2430.000209
ORF1ab/nsp12293T293TacAacG33B.1.466.20.001174
ORF1ab/nsp12293T293TacAacG33B.1.5640.001278
ORF1ab/nsp12293T293TacAacG22AY.1200.000074
ORF1ab/nsp12293T293TacAacG22B.1.1770.000026
ORF1ab/nsp12293T293TacAacG22B.1.4270.000101
ORF1ab/nsp12293T293TacAacG22B.1.6190.001742
ORF1ab/nsp12293T293TacAacT110.055556
ORF1ab/nsp12293T293TacAacG11AD.20.000219
ORF1ab/nsp12293T293TacAacC11AY.1020.000027
ORF1ab/nsp12293T293TacAacG11AY.1180.000063
ORF1ab/nsp12293T293TacAacG11AY.260.000028
ORF1ab/nsp12293T293TacAacG11AY.420.00004
ORF1ab/nsp12293T293TacAacG11AY.470.000031
ORF1ab/nsp12293T293TacAacG11AY.50.000021
ORF1ab/nsp12293T293TacAacC11AY.630.000387
ORF1ab/nsp12293T293TacAacG11AY.710.000475
ORF1ab/nsp12293T293TacAacG11AY.80.000606
ORF1ab/nsp12293T293TacAacG11AY.840.000437
ORF1ab/nsp12293T293TacAacT11AY.98.10.000048
ORF1ab/nsp12293T293TacAacG11B.1.10.000018
ORF1ab/nsp12293T293TacAacG11B.1.1.500.000679
ORF1ab/nsp12293T293TacAacT11B.1.177.180.00116
ORF1ab/nsp12293T293TacAacG11B.1.177.860.000183
ORF1ab/nsp12293T293TacAacT11B.1.177.890.02439
ORF1ab/nsp12293T293TacAacT11B.1.3360.002439
ORF1ab/nsp12293T293TacAacG11B.1.5260.000024
ORF1ab/nsp12293T293TacAacG11B.1.6090.000479
ORF1ab/nsp12293T293TacAacT11B.1.6370.000073
ORF1ab/nsp12293T293TacAacG11P.10.000016