CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T293S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12293T293ST4685SnonsynAcaTca23190.82608714317-14319
ORF1ab/nsp12293T293ST4685SnonsynAcATcT2320.086956514317-14319
ORF1ab/nsp12293T293ST4685SnonsynAcATcC2320.086956514317-14319

Details of the mutation T293S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12293T293SAcaTca1923All0.000004
ORF1ab/nsp12293T293SAcATcT223All0
ORF1ab/nsp12293T293SAcATcC223All0
ORF1ab/nsp12293T293SAcaTca1313P.10.000205
ORF1ab/nsp12293T293SAcaTca23B.1.1.70.000002
ORF1ab/nsp12293T293SAcATcC13B.1.1.70.000001
ORF1ab/nsp12293T293SAcATcT120.055556
ORF1ab/nsp12293T293SAcaTca120.055556
ORF1ab/nsp12293T293SAcaTca11AY.440.000006
ORF1ab/nsp12293T293SAcATcC11B0.000128
ORF1ab/nsp12293T293SAcATcT11B.10.000009
ORF1ab/nsp12293T293SAcaTca11B.1.1.2370.005405
ORF1ab/nsp12293T293SAcaTca11B.1.1770.000013