CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T293L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12293T293LT4685LnonsynACACTG620.33333314317-14319
ORF1ab/nsp12293T293LT4685LnonsynACaCTa620.33333314317-14319
ORF1ab/nsp12293T293LT4685LnonsynACACTT610.16666714317-14319
ORF1ab/nsp12293T293LT4685LnonsynACaTTa610.16666714317-14319

Details of the mutation T293L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12293T293LACACTG26All0
ORF1ab/nsp12293T293LACaCTa26All0
ORF1ab/nsp12293T293LACACTT16All0
ORF1ab/nsp12293T293LACaTTa16All0
ORF1ab/nsp12293T293LACACTG250.111111
ORF1ab/nsp12293T293LACaCTa150.055556
ORF1ab/nsp12293T293LACACTT150.055556
ORF1ab/nsp12293T293LACaTTa150.055556
ORF1ab/nsp12293T293LACaCTa11AY.30.00001