CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T26T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1226T26TT4418TsynacTacC1541270.82467513516-13518
ORF1ab/nsp1226T26TT4418TsynacTacA154170.1103913516-13518
ORF1ab/nsp1226T26TT4418TsynacTacG154100.064935113516-13518

Details of the mutation T26T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1226T26TacTacC127154All0.000024
ORF1ab/nsp1226T26TacTacA17154All0.000003
ORF1ab/nsp1226T26TacTacG10154All0.000002
ORF1ab/nsp1226T26TacTacC2020AY.1200.000744
ORF1ab/nsp1226T26TacTacC2020AY.46.60.001444
ORF1ab/nsp1226T26TacTacC1818C.370.002089
ORF1ab/nsp1226T26TacTacC1617B.1.1.70.000014
ORF1ab/nsp1226T26TacTacA117B.1.1.70.000001
ORF1ab/nsp1226T26TacTacA1116B.1.4290.000259
ORF1ab/nsp1226T26TacTacC516B.1.4290.000118
ORF1ab/nsp1226T26TacTacG79AY.1030.000043
ORF1ab/nsp1226T26TacTacC29AY.1030.000012
ORF1ab/nsp1226T26TacTacC99B.1.1770.000119
ORF1ab/nsp1226T26TacTacC45AY.250.000024
ORF1ab/nsp1226T26TacTacA15AY.250.000006
ORF1ab/nsp1226T26TacTacC55B.1.617.20.000019
ORF1ab/nsp1226T26TacTacC44AY.340.000388
ORF1ab/nsp1226T26TacTacC33AY.30.00003
ORF1ab/nsp1226T26TacTacC33AY.440.000018
ORF1ab/nsp1226T26TacTacC22AY.120.2.10.000997
ORF1ab/nsp1226T26TacTacC22AY.610.00021
ORF1ab/nsp1226T26TacTacC11A.23.10.000704
ORF1ab/nsp1226T26TacTacA11AY.1080.001103
ORF1ab/nsp1226T26TacTacC11AY.1170.000085
ORF1ab/nsp1226T26TacTacG11AY.230.00007
ORF1ab/nsp1226T26TacTacA11AY.320.000532
ORF1ab/nsp1226T26TacTacC11AY.40.000002
ORF1ab/nsp1226T26TacTacC11AY.670.000464
ORF1ab/nsp1226T26TacTacC11AY.790.001211
ORF1ab/nsp1226T26TacTacG11B.10.000009
ORF1ab/nsp1226T26TacTacC11B.1.10.000018
ORF1ab/nsp1226T26TacTacA11B.1.1.2220.000204
ORF1ab/nsp1226T26TacTacC11B.1.1.5190.00004
ORF1ab/nsp1226T26TacTacC11B.1.177.40.000211
ORF1ab/nsp1226T26TacTacC11B.1.177.70.000165
ORF1ab/nsp1226T26TacTacC11B.1.2210.000071
ORF1ab/nsp1226T26TacTacC11B.1.360.000146
ORF1ab/nsp1226T26TacTacC11B.1.3750.00082
ORF1ab/nsp1226T26TacTacC11B.1.4980.020408
ORF1ab/nsp1226T26TacTacA11C.350.000774
ORF1ab/nsp1226T26TacTacG11D.20.000075
ORF1ab/nsp1226T26TacTacC11P.1.140.000048