CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T26S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1226T26ST4418SnonsynaCtaGt1280.66666713516-13518
ORF1ab/nsp1226T26ST4418SnonsynActTct1240.33333313516-13518

Details of the mutation T26S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1226T26SaCtaGt812All0.000002
ORF1ab/nsp1226T26SActTct412All0.000001
ORF1ab/nsp1226T26SaCtaGt22AY.1200.000074
ORF1ab/nsp1226T26SActTct22B.10.000018
ORF1ab/nsp1226T26SaCtaGt11AY.260.000028
ORF1ab/nsp1226T26SaCtaGt11AY.30.00001
ORF1ab/nsp1226T26SActTct11AY.330.000067
ORF1ab/nsp1226T26SActTct11AY.40.000002
ORF1ab/nsp1226T26SaCtaGt11B.1.1.2630.001558
ORF1ab/nsp1226T26SaCtaGt11B.1.177.570.000281
ORF1ab/nsp1226T26SaCtaGt11B.1.20.000009
ORF1ab/nsp1226T26SaCtaGt11C.160.00106