CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = T26A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1226T26AT4418AnonsynActGct75740.98666713516-13518
ORF1ab/nsp1226T26AT4418AnonsynAcTGcC7510.013333313516-13518

Details of the mutation T26A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1226T26AActGct7475All0.000014
ORF1ab/nsp1226T26AAcTGcC175All0
ORF1ab/nsp1226T26AActGct3737AY.40.000058
ORF1ab/nsp1226T26AActGct99B.1.2310.290323
ORF1ab/nsp1226T26AActGct55B.1.1770.000066
ORF1ab/nsp1226T26AActGct44P.10.000063
ORF1ab/nsp1226T26AActGct33AY.250.000018
ORF1ab/nsp1226T26AActGct33B.1.10.000054
ORF1ab/nsp1226T26AActGct33B.1.1.70.000003
ORF1ab/nsp1226T26AActGct33B.1.617.20.000011
ORF1ab/nsp1226T26AActGct22AY.5.20.004926
ORF1ab/nsp1226T26AActGct11AY.1020.000027
ORF1ab/nsp1226T26AActGct11AY.330.000067
ORF1ab/nsp1226T26AAcTGcC11AY.9.20.000037
ORF1ab/nsp1226T26AActGct11B.1.1.580.005376
ORF1ab/nsp1226T26AActGct11B.1.20.000009
ORF1ab/nsp1226T26AActGct11B.1.5750.000303