CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 248 | T248I | T4640I | nonsyn | aCc | aTc | 3951 | 3946 | 0.998734 | 14182-14184 |
ORF1ab/nsp12 | 248 | T248I | T4640I | nonsyn | aCC | aTT | 3951 | 5 | 0.0012655 | 14182-14184 |
Details of the mutation T248I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3946 | 3951 | All | 0.000755 |
ORF1ab/nsp12 | 248 | T248I | aCC | aTT | 5 | 3951 | All | 0.000001 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1512 | 1514 | B.1.1.7 | 0.001354 |
ORF1ab/nsp12 | 248 | T248I | aCC | aTT | 2 | 1514 | B.1.1.7 | 0.000002 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 279 | 279 | AY.4 | 0.000434 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 248 | 248 | B.1.2 | 0.002184 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 122 | 122 | P.1 | 0.001922 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 120 | 120 | B.1.617.2 | 0.000452 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 100 | 100 | A.23.1 | 0.070423 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 85 | 85 | AY.25 | 0.000511 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 79 | 79 | AY.43 | 0.00035 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 69 | 69 | AY.103 | 0.000428 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 59 | 59 | B.1 | 0.00054 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 55 | 55 | B.1.526 | 0.001293 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 48 | 48 | AY.100 | 0.002208 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 47 | 47 | B.1.429 | 0.001106 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 45 | 45 | AY.102 | 0.001193 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 42 | 42 | AY.4.5 | 0.004515 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 35 | 35 | B.1.497 | 0.011017 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 33 | 33 | B.1.1.416 | 0.029864 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 30 | 30 | AY.98.1 | 0.001453 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 29 | 29 | AY.120 | 0.001078 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 28 | 28 | AY.3 | 0.000278 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 25 | 25 | B.1.1.176 | 0.010984 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 24 | 24 | N.5 | 0.042403 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 22 | 22 | AY.44 | 0.000134 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 22 | 22 | B.1.177 | 0.00029 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 20 | 21 | B.1.1 | 0.000363 |
ORF1ab/nsp12 | 248 | T248I | aCC | aTT | 1 | 21 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 18 | 18 | AY.26 | 0.00051 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 18 | 18 | AY.39 | 0.000445 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 18 | 18 | B.1.234 | 0.002375 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 17 | 17 | AY.5 | 0.000351 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 17 | 17 | B.1.1.253 | 0.042607 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 17 | 17 | B.1.177.58 | 0.022636 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 16 | 16 | B.1.400 | 0.006864 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 16 | 16 | B.1.438.1 | 0.001716 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 16 | 16 | C.35 | 0.012384 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 16 | 16 | P.1.15 | 0.003717 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 15 | 15 | AY.19 | 0.017104 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 15 | 15 | AY.6 | 0.000617 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 15 | 15 | P.2 | 0.0028 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 14 | 14 | AY.93 | 0.003823 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 13 | 13 | AY.119 | 0.000459 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 12 | 12 | AY.91 | 0.008766 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 12 | 12 | B.1.309 | 0.571429 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 12 | 12 | B.1.596 | 0.001046 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 12 | 12 | B.1.637 | 0.000877 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 11 | 11 | B.1.160 | 0.000343 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 11 | 11 | B.1.36.38 | 0.018062 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 10 | 10 | AY.20 | 0.000389 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 10 | 10 | AY.29 | 0.000158 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 10 | 10 | AY.4.2 | 0.000217 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 10 | 10 | B.1.1.519 | 0.000397 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 10 | 10 | B.1.459 | 0.040816 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 9 | 9 | B.1.1.420 | 0.009054 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 9 | 9 | B.1.258.17 | 0.000936 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 8 | 8 | B.1.525 | 0.000905 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | AY.46.5 | 0.001389 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | AY.47 | 0.000218 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | AY.62 | 0.00305 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | B.1.1.306 | 0.003069 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | B.1.177.81 | 0.001325 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 7 | 7 | Q.1 | 0.000884 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 6 | 6 | AY.64 | 0.003571 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 6 | 6 | AY.9.2 | 0.00022 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 6 | 6 | D.2 | 0.00045 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 5 | 5 | A.2.4 | 0.016835 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 5 | 5 | B.1.1.39 | 0.002548 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 5 | 5 | B.1.319 | 0.015244 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 5 | B.1.36.35 | 0.007812 |
ORF1ab/nsp12 | 248 | T248I | aCC | aTT | 2 | 5 | B.1.36.35 | 0.005208 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.1.36.8 | 0.004 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.1.369 | 0.001141 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.1.582 | 0.001963 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.40 | 0.001457 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 4 | 4 | B.6.6 | 0.003556 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.118 | 0.000188 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.120.2 | 0.003856 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | AY.73 | 0.001996 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B | 0.000383 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.1.434 | 0.001046 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.177.44 | 0.001557 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.177.8 | 0.002257 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | A.2.3 | 0.009479 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.1.277 | 0.001517 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.1.43 | 0.029851 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.1.72 | 0.060606 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.177.56 | 0.001335 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.581 | 0.018868 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.165 | 0.015385 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.225 | 0.007194 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.230 | 0.009174 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.261 | 0.008621 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.213 | 0.014925 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.258.2 | 0.004505 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.370 | 0.008 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.556 | 0.007519 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.585 | 0.027778 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp12 | 248 | T248I | aCc | aTc | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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