CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S778N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12778S778NS5170NnonsynaGcaAc6146130.99837115772-15774
ORF1ab/nsp12778S778NS5170NnonsynaGCaAT61410.0016286615772-15774

Details of the mutation S778N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12778S778NaGcaAc613614All0.000117
ORF1ab/nsp12778S778NaGCaAT1614All0
ORF1ab/nsp12778S778NaGcaAc178178B.1.1.70.000159
ORF1ab/nsp12778S778NaGcaAc145145B.1.617.20.000546
ORF1ab/nsp12778S778NaGcaAc108108AY.430.000478
ORF1ab/nsp12778S778NaGcaAc4444B.1.1.3430.916667
ORF1ab/nsp12778S778NaGcaAc2020AY.40.000031
ORF1ab/nsp12778S778NaGcaAc1212AY.440.000073
ORF1ab/nsp12778S778NaGcaAc1111AY.390.000272
ORF1ab/nsp12778S778NaGcaAc77B.1.1770.000092
ORF1ab/nsp12778S778NaGcaAc66A.190.056604
ORF1ab/nsp12778S778NaGcaAc66AY.1030.000037
ORF1ab/nsp12778S778NaGcaAc55AY.360.000741
ORF1ab/nsp12778S778NaGcaAc55AY.460.00052
ORF1ab/nsp12778S778NaGcaAc55B.1.1.2140.000277
ORF1ab/nsp12778S778NaGcaAc230.111111
ORF1ab/nsp12778S778NaGCaAT130.055556
ORF1ab/nsp12778S778NaGcaAc33B.1.20.000026
ORF1ab/nsp12778S778NaGcaAc22AY.10.000791
ORF1ab/nsp12778S778NaGcaAc22AY.1020.000053
ORF1ab/nsp12778S778NaGcaAc22AY.1140.000462
ORF1ab/nsp12778S778NaGcaAc22AY.1190.000071
ORF1ab/nsp12778S778NaGcaAc22AY.140.000176
ORF1ab/nsp12778S778NaGcaAc22AY.250.000012
ORF1ab/nsp12778S778NaGcaAc22AY.30.00002
ORF1ab/nsp12778S778NaGcaAc22AY.4.40.000818
ORF1ab/nsp12778S778NaGcaAc22AY.490.00639
ORF1ab/nsp12778S778NaGcaAc22AY.870.001665
ORF1ab/nsp12778S778NaGcaAc22B.1.1600.000062
ORF1ab/nsp12778S778NaGcaAc22B.1.360.000292
ORF1ab/nsp12778S778NaGcaAc22B.1.5260.000047
ORF1ab/nsp12778S778NaGcaAc22P.10.000032
ORF1ab/nsp12778S778NaGcaAc11AY.100.00053
ORF1ab/nsp12778S778NaGcaAc11AY.1180.000063
ORF1ab/nsp12778S778NaGcaAc11AY.230.00007
ORF1ab/nsp12778S778NaGcaAc11AY.320.000532
ORF1ab/nsp12778S778NaGcaAc11AY.330.000067
ORF1ab/nsp12778S778NaGcaAc11AY.4.2.10.000149
ORF1ab/nsp12778S778NaGcaAc11AY.450.000122
ORF1ab/nsp12778S778NaGcaAc11AY.46.10.001027
ORF1ab/nsp12778S778NaGcaAc11AY.610.000105
ORF1ab/nsp12778S778NaGcaAc11AY.740.000116
ORF1ab/nsp12778S778NaGcaAc11AY.750.000056
ORF1ab/nsp12778S778NaGcaAc11AY.810.001992
ORF1ab/nsp12778S778NaGcaAc11AY.840.000437
ORF1ab/nsp12778S778NaGcaAc11AY.9.20.000037
ORF1ab/nsp12778S778NaGcaAc11AY.950.000761
ORF1ab/nsp12778S778NaGcaAc11AY.99.20.000092
ORF1ab/nsp12778S778NaGcaAc11B.10.000009
ORF1ab/nsp12778S778NaGcaAc11B.1.10.000018
ORF1ab/nsp12778S778NaGcaAc11B.1.1.2180.007692
ORF1ab/nsp12778S778NaGcaAc11B.1.1.2970.002237
ORF1ab/nsp12778S778NaGcaAc11B.1.258.240.010753
ORF1ab/nsp12778S778NaGcaAc11B.1.3510.00003
ORF1ab/nsp12778S778NaGcaAc11B.1.4270.00005
ORF1ab/nsp12778S778NaGcaAc11B.1.4290.000024
ORF1ab/nsp12778S778NaGcaAc11B.1.619.10.000641
ORF1ab/nsp12778S778NaGcaAc11B.1.6210.000089
ORF1ab/nsp12778S778NaGcaAc11P.1.120.000484
ORF1ab/nsp12778S778NaGcaAc11Q.10.000126