CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S647I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12647S647IS5039InonsynaGcaTc57045704115379-15381

Details of the mutation S647I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12647S647IaGcaTc57045704All0.001091
ORF1ab/nsp12647S647IaGcaTc10621062AY.40.001653
ORF1ab/nsp12647S647IaGcaTc679679AY.860.563485
ORF1ab/nsp12647S647IaGcaTc475475B.1.617.20.001789
ORF1ab/nsp12647S647IaGcaTc469469B.1.1.70.00042
ORF1ab/nsp12647S647IaGcaTc309309B.1.1.3010.364387
ORF1ab/nsp12647S647IaGcaTc238238B.10.00218
ORF1ab/nsp12647S647IaGcaTc233233AY.430.001032
ORF1ab/nsp12647S647IaGcaTc130130AY.1030.000807
ORF1ab/nsp12647S647IaGcaTc110110B.1.1110.12926
ORF1ab/nsp12647S647IaGcaTc100100AY.250.000601
ORF1ab/nsp12647S647IaGcaTc8484AY.190.095781
ORF1ab/nsp12647S647IaGcaTc8484B.1.20.00074
ORF1ab/nsp12647S647IaGcaTc7979AY.440.000481
ORF1ab/nsp12647S647IaGcaTc7474B.1.1.510.127148
ORF1ab/nsp12647S647IaGcaTc6464AY.260.001812
ORF1ab/nsp12647S647IaGcaTc6363B.1.1.2160.0561
ORF1ab/nsp12647S647IaGcaTc5959B.1.416.10.092188
ORF1ab/nsp12647S647IaGcaTc5757B.1.177.210.004359
ORF1ab/nsp12647S647IaGcaTc5454B.1.10.00098
ORF1ab/nsp12647S647IaGcaTc5454B.1.4290.001271
ORF1ab/nsp12647S647IaGcaTc5050AY.980.00395
ORF1ab/nsp12647S647IaGcaTc4545AY.1020.001193
ORF1ab/nsp12647S647IaGcaTc4242AY.50.000867
ORF1ab/nsp12647S647IaGcaTc3636AY.330.002404
ORF1ab/nsp12647S647IaGcaTc3434AY.390.00084
ORF1ab/nsp12647S647IaGcaTc3333P.10.00052
ORF1ab/nsp12647S647IaGcaTc3131AY.30.000308
ORF1ab/nsp12647S647IaGcaTc3030AY.200.001166
ORF1ab/nsp12647S647IaGcaTc2828B.1.1.280.008715
ORF1ab/nsp12647S647IaGcaTc2727AY.1130.003845
ORF1ab/nsp12647S647IaGcaTc2727B.1.1.4320.034177
ORF1ab/nsp12647S647IaGcaTc2626AY.99.20.002396
ORF1ab/nsp12647S647IaGcaTc2323AY.46.60.001661
ORF1ab/nsp12647S647IaGcaTc2121B.1.1.2770.015933
ORF1ab/nsp12647S647IaGcaTc2020AY.470.000622
ORF1ab/nsp12647S647IaGcaTc1919B.1.5250.00215
ORF1ab/nsp12647S647IaGcaTc1818B.1.1.2140.000998
ORF1ab/nsp12647S647IaGcaTc1818B.1.2430.001253
ORF1ab/nsp12647S647IaGcaTc1717B.1.1770.000224
ORF1ab/nsp12647S647IaGcaTc1717B.1.617.10.002192
ORF1ab/nsp12647S647IaGcaTc1616B.1.1.3060.007014
ORF1ab/nsp12647S647IaGcaTc1515AY.360.002223
ORF1ab/nsp12647S647IaGcaTc1515AY.420.000603
ORF1ab/nsp12647S647IaGcaTc1414B.1.6330.583333
ORF1ab/nsp12647S647IaGcaTc1313AY.650.00693
ORF1ab/nsp12647S647IaGcaTc1212AU.10.01519
ORF1ab/nsp12647S647IaGcaTc1212AY.9.20.000441
ORF1ab/nsp12647S647IaGcaTc1111B.1.3510.000327
ORF1ab/nsp12647S647IaGcaTc1010AY.1080.011025
ORF1ab/nsp12647S647IaGcaTc1010AY.460.001041
ORF1ab/nsp12647S647IaGcaTc1010B.1.360.001459
ORF1ab/nsp12647S647IaGcaTc1010B.1.36.170.004941
ORF1ab/nsp12647S647IaGcaTc1010D.20.00075
ORF1ab/nsp12647S647IaGcaTc1010P.1.170.001618
ORF1ab/nsp12647S647IaGcaTc1010P.20.001866
ORF1ab/nsp12647S647IaGcaTc99AM.11
ORF1ab/nsp12647S647IaGcaTc99AY.290.000142
ORF1ab/nsp12647S647IaGcaTc99AY.540.000858
ORF1ab/nsp12647S647IaGcaTc99B.1.177.560.006008
ORF1ab/nsp12647S647IaGcaTc99B.1.5260.000212
ORF1ab/nsp12647S647IaGcaTc88AY.4.20.000174
ORF1ab/nsp12647S647IaGcaTc88AY.450.000973
ORF1ab/nsp12647S647IaGcaTc88AY.98.10.000387
ORF1ab/nsp12647S647IaGcaTc88B.1.1.3680.024691
ORF1ab/nsp12647S647IaGcaTc77AY.140.000616
ORF1ab/nsp12647S647IaGcaTc77AY.230.000488
ORF1ab/nsp12647S647IaGcaTc77AY.39.10.000277
ORF1ab/nsp12647S647IaGcaTc77AY.60.000288
ORF1ab/nsp12647S647IaGcaTc77B.1.2210.000497
ORF1ab/nsp12647S647IaGcaTc77B.1.2580.000466
ORF1ab/nsp12647S647IaGcaTc77B.1.4270.000353
ORF1ab/nsp12647S647IaGcaTc77P.1.140.000335
ORF1ab/nsp12647S647IaGcaTc66AY.1180.000376
ORF1ab/nsp12647S647IaGcaTc66AY.1200.000223
ORF1ab/nsp12647S647IaGcaTc66AY.90.000406
ORF1ab/nsp12647S647IaGcaTc66B.1.1600.000187
ORF1ab/nsp12647S647IaGcaTc66B.1.5440.036145
ORF1ab/nsp12647S647IaGcaTc66B.1.6030.06383
ORF1ab/nsp12647S647IaGcaTc55A0.001935
ORF1ab/nsp12647S647IaGcaTc55AY.1110.000916
ORF1ab/nsp12647S647IaGcaTc55AY.1190.000177
ORF1ab/nsp12647S647IaGcaTc55AY.270.000324
ORF1ab/nsp12647S647IaGcaTc55AY.560.008026
ORF1ab/nsp12647S647IaGcaTc55AY.610.000524
ORF1ab/nsp12647S647IaGcaTc55B0.000639
ORF1ab/nsp12647S647IaGcaTc55B.1.177.120.000758
ORF1ab/nsp12647S647IaGcaTc55B.1.6250.011765
ORF1ab/nsp12647S647IaGcaTc55B.1.6370.000365
ORF1ab/nsp12647S647IaGcaTc44AY.120.10.001284
ORF1ab/nsp12647S647IaGcaTc44AY.5.40.001107
ORF1ab/nsp12647S647IaGcaTc44AY.870.003331
ORF1ab/nsp12647S647IaGcaTc44B.1.1.1760.001757
ORF1ab/nsp12647S647IaGcaTc44B.1.1.2850.026144
ORF1ab/nsp12647S647IaGcaTc44B.1.1.3050.015444
ORF1ab/nsp12647S647IaGcaTc44B.1.1.3590.111111
ORF1ab/nsp12647S647IaGcaTc44B.1.1.5190.000159
ORF1ab/nsp12647S647IaGcaTc44B.1.2400.000862
ORF1ab/nsp12647S647IaGcaTc44B.1.4160.005076
ORF1ab/nsp12647S647IaGcaTc44C.370.000464
ORF1ab/nsp12647S647IaGcaTc33A.2.50.001497
ORF1ab/nsp12647S647IaGcaTc33A.23.10.002113
ORF1ab/nsp12647S647IaGcaTc33A.290.015957
ORF1ab/nsp12647S647IaGcaTc33AY.1060.001005
ORF1ab/nsp12647S647IaGcaTc33AY.1170.000254
ORF1ab/nsp12647S647IaGcaTc33AY.1210.000406
ORF1ab/nsp12647S647IaGcaTc33AY.160.001139
ORF1ab/nsp12647S647IaGcaTc33AY.4.50.000322
ORF1ab/nsp12647S647IaGcaTc33AY.400.002893
ORF1ab/nsp12647S647IaGcaTc33AY.5.30.001012
ORF1ab/nsp12647S647IaGcaTc33AY.550.002752
ORF1ab/nsp12647S647IaGcaTc33AY.70.000588
ORF1ab/nsp12647S647IaGcaTc33AY.75.10.000541
ORF1ab/nsp12647S647IaGcaTc33AY.960.006224
ORF1ab/nsp12647S647IaGcaTc33B.1.1.2910.002227
ORF1ab/nsp12647S647IaGcaTc33B.1.1.500.002037
ORF1ab/nsp12647S647IaGcaTc33B.1.30.007853
ORF1ab/nsp12647S647IaGcaTc33B.1.36.160.004274
ORF1ab/nsp12647S647IaGcaTc33B.1.4260.003027
ORF1ab/nsp12647S647IaGcaTc33B.1.4780.035294
ORF1ab/nsp12647S647IaGcaTc33B.1.6210.000266
ORF1ab/nsp12647S647IaGcaTc22AY.1000.000092
ORF1ab/nsp12647S647IaGcaTc22AY.1090.001479
ORF1ab/nsp12647S647IaGcaTc22AY.16.10.00094
ORF1ab/nsp12647S647IaGcaTc22AY.170.016393
ORF1ab/nsp12647S647IaGcaTc22AY.3.10.000171
ORF1ab/nsp12647S647IaGcaTc22AY.4.30.001684
ORF1ab/nsp12647S647IaGcaTc22AY.46.20.001271
ORF1ab/nsp12647S647IaGcaTc22AY.740.000231
ORF1ab/nsp12647S647IaGcaTc22AY.750.000112
ORF1ab/nsp12647S647IaGcaTc22AY.9.10.000167
ORF1ab/nsp12647S647IaGcaTc22AY.920.000575
ORF1ab/nsp12647S647IaGcaTc22B.1.1.2220.000408
ORF1ab/nsp12647S647IaGcaTc22B.1.1.2610.017241
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3170.000823
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3390.021053
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3690.000892
ORF1ab/nsp12647S647IaGcaTc22B.1.1.370.000386
ORF1ab/nsp12647S647IaGcaTc22B.1.130.004751
ORF1ab/nsp12647S647IaGcaTc22B.1.177.860.000367
ORF1ab/nsp12647S647IaGcaTc22B.1.221.30.001667
ORF1ab/nsp12647S647IaGcaTc22B.1.2360.004107
ORF1ab/nsp12647S647IaGcaTc22B.1.3110.000549
ORF1ab/nsp12647S647IaGcaTc22B.1.351.20.000605
ORF1ab/nsp12647S647IaGcaTc22B.1.36.290.001035
ORF1ab/nsp12647S647IaGcaTc22B.1.36.80.002
ORF1ab/nsp12647S647IaGcaTc22B.1.4000.000858
ORF1ab/nsp12647S647IaGcaTc22B.1.4030.006536
ORF1ab/nsp12647S647IaGcaTc22B.1.5170.000854
ORF1ab/nsp12647S647IaGcaTc22B.1.5280.095238
ORF1ab/nsp12647S647IaGcaTc22B.1.5610.000794
ORF1ab/nsp12647S647IaGcaTc22B.1.5710.019417
ORF1ab/nsp12647S647IaGcaTc22B.1.6270.00404
ORF1ab/nsp12647S647IaGcaTc22C.36.30.001134
ORF1ab/nsp12647S647IaGcaTc22N.50.003534
ORF1ab/nsp12647S647IaGcaTc22P.1.150.000465
ORF1ab/nsp12647S647IaGcaTc22Q.30.00029
ORF1ab/nsp12647S647IaGcaTc22R.10.00018
ORF1ab/nsp12647S647IaGcaTc11A.20.000662
ORF1ab/nsp12647S647IaGcaTc11A.40.012821
ORF1ab/nsp12647S647IaGcaTc11AT.10.005128
ORF1ab/nsp12647S647IaGcaTc11AY.100.00053
ORF1ab/nsp12647S647IaGcaTc11AY.1050.000643
ORF1ab/nsp12647S647IaGcaTc11AY.120.2.10.000498
ORF1ab/nsp12647S647IaGcaTc11AY.130.000161
ORF1ab/nsp12647S647IaGcaTc11AY.240.000431
ORF1ab/nsp12647S647IaGcaTc11AY.29.10.000221
ORF1ab/nsp12647S647IaGcaTc11AY.34.10.00051
ORF1ab/nsp12647S647IaGcaTc11AY.4.2.10.000149
ORF1ab/nsp12647S647IaGcaTc11AY.4.40.000409
ORF1ab/nsp12647S647IaGcaTc11AY.410.000294
ORF1ab/nsp12647S647IaGcaTc11AY.46.10.001027
ORF1ab/nsp12647S647IaGcaTc11AY.46.40.000165
ORF1ab/nsp12647S647IaGcaTc11AY.590.00053
ORF1ab/nsp12647S647IaGcaTc11AY.620.000436
ORF1ab/nsp12647S647IaGcaTc11AY.7.10.000113
ORF1ab/nsp12647S647IaGcaTc11AY.820.001357
ORF1ab/nsp12647S647IaGcaTc11AY.840.000437
ORF1ab/nsp12647S647IaGcaTc11AY.850.000427
ORF1ab/nsp12647S647IaGcaTc11AY.930.000273
ORF1ab/nsp12647S647IaGcaTc11AY.990.001049
ORF1ab/nsp12647S647IaGcaTc11B.1.1.1250.010204
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2040.00304
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2440.015385
ORF1ab/nsp12647S647IaGcaTc11B.1.1.250.000569
ORF1ab/nsp12647S647IaGcaTc11B.1.1.270.00565
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2940.001266
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3180.000302
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3260.001761
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3740.002375
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3800.009804
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3970.002252
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4330.001425
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4480.002033
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4640.001473
ORF1ab/nsp12647S647IaGcaTc11B.1.1.470.005348
ORF1ab/nsp12647S647IaGcaTc11B.1.1.590.006494
ORF1ab/nsp12647S647IaGcaTc11B.1.1030.019231
ORF1ab/nsp12647S647IaGcaTc11B.1.1260.001276
ORF1ab/nsp12647S647IaGcaTc11B.1.1570.002985
ORF1ab/nsp12647S647IaGcaTc11B.1.177.420.000894
ORF1ab/nsp12647S647IaGcaTc11B.1.177.460.000918
ORF1ab/nsp12647S647IaGcaTc11B.1.177.650.000665
ORF1ab/nsp12647S647IaGcaTc11B.1.177.730.000566
ORF1ab/nsp12647S647IaGcaTc11B.1.177.90.001332
ORF1ab/nsp12647S647IaGcaTc11B.1.221.20.004016
ORF1ab/nsp12647S647IaGcaTc11B.1.2290.009709
ORF1ab/nsp12647S647IaGcaTc11B.1.258.170.000104
ORF1ab/nsp12647S647IaGcaTc11B.1.2600.003344
ORF1ab/nsp12647S647IaGcaTc11B.1.2650.001271
ORF1ab/nsp12647S647IaGcaTc11B.1.3200.001245
ORF1ab/nsp12647S647IaGcaTc11B.1.36.180.00042
ORF1ab/nsp12647S647IaGcaTc11B.1.36.190.009259
ORF1ab/nsp12647S647IaGcaTc11B.1.36.380.001642
ORF1ab/nsp12647S647IaGcaTc11B.1.3620.001541
ORF1ab/nsp12647S647IaGcaTc11B.1.3670.000792
ORF1ab/nsp12647S647IaGcaTc11B.1.400.019608
ORF1ab/nsp12647S647IaGcaTc11B.1.4090.000781
ORF1ab/nsp12647S647IaGcaTc11B.1.4280.00102
ORF1ab/nsp12647S647IaGcaTc11B.1.438.10.000107
ORF1ab/nsp12647S647IaGcaTc11B.1.4620.007246
ORF1ab/nsp12647S647IaGcaTc11B.1.466.20.000391
ORF1ab/nsp12647S647IaGcaTc11B.1.4980.020408
ORF1ab/nsp12647S647IaGcaTc11B.1.5240.001406
ORF1ab/nsp12647S647IaGcaTc11B.1.5380.008065
ORF1ab/nsp12647S647IaGcaTc11B.1.575.10.002439
ORF1ab/nsp12647S647IaGcaTc11B.1.5760.000907
ORF1ab/nsp12647S647IaGcaTc11B.1.5770.000687
ORF1ab/nsp12647S647IaGcaTc11B.1.5910.010638
ORF1ab/nsp12647S647IaGcaTc11B.1.5950.000261
ORF1ab/nsp12647S647IaGcaTc11B.1.6280.000352
ORF1ab/nsp12647S647IaGcaTc11B.4.10.018868
ORF1ab/nsp12647S647IaGcaTc11B.400.000364
ORF1ab/nsp12647S647IaGcaTc11C.140.004329
ORF1ab/nsp12647S647IaGcaTc11C.180.002591
ORF1ab/nsp12647S647IaGcaTc11C.350.000774
ORF1ab/nsp12647S647IaGcaTc11C.400.027778
ORF1ab/nsp12647S647IaGcaTc11K.10.02381
ORF1ab/nsp12647S647IaGcaTc11P.1.120.000484
ORF1ab/nsp12647S647IaGcaTc11P.1.160.000374
ORF1ab/nsp12647S647IaGcaTc11P.1.70.000319
ORF1ab/nsp12647S647IaGcaTc11Q.10.000126
ORF1ab/nsp12647S647IaGcaTc11Q.20.000613
ORF1ab/nsp12647S647IaGcaTc11Q.80.000165
ORF1ab/nsp12647S647IaGcaTc11W.30.005263