CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : Mut = S647C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12647S647CS5039CnonsynAgcTgc760.85714315379-15381
ORF1ab/nsp12647S647CS5039CnonsynAgCTgT710.14285715379-15381

Details of the mutation S647C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12647S647CAgcTgc67All0.000001
ORF1ab/nsp12647S647CAgCTgT17All0
ORF1ab/nsp12647S647CAgcTgc120.055556
ORF1ab/nsp12647S647CAgCTgT120.055556
ORF1ab/nsp12647S647CAgcTgc11AY.1000.000046
ORF1ab/nsp12647S647CAgcTgc11AY.440.000006
ORF1ab/nsp12647S647CAgcTgc11AY.50.000021
ORF1ab/nsp12647S647CAgcTgc11B.1.4290.000024
ORF1ab/nsp12647S647CAgcTgc11B.1.438.10.000107